RNA–Protein interactions for RNA: ENST00000404276.5

CHEK2-208, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,785 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-208ENST00000404276 NISCHQ9Y2I1 1504 aa24.54■■□□□ 1.52
CHEK2-208ENST00000404276 CCDC180Q9P1Z9 1646 aa21.59■■□□□ 1.05
CHEK2-208ENST00000404276 ABCC9O60706 1549 aa20.73■□□□□ 0.91
CHEK2-208ENST00000404276 ZCCHC6Q5VYS8 1495 aaKnown RBP20.54■□□□□ 0.88
CHEK2-208ENST00000404276 DCAF1Q9Y4B6 1507 aa20.32■□□□□ 0.84
CHEK2-208ENST00000404276 DCAF8L2P0C7V8 631 aa20.29■□□□□ 0.84
CHEK2-208ENST00000404276 MYO15BQ96JP2 1530 aa20.24■□□□□ 0.83
CHEK2-208ENST00000404276 NACADO15069 1562 aa20.2■□□□□ 0.82
CHEK2-208ENST00000404276 RB1CC1Q8TDY2 1594 aa20.11■□□□□ 0.81
CHEK2-208ENST00000404276 SCRIBQ14160 1630 aa19.75■□□□□ 0.75
CHEK2-208ENST00000404276 UNC13AQ9UPW8 1703 aa19.69■□□□□ 0.74
CHEK2-208ENST00000404276 SHROOM4Q9ULL8 1493 aa19.65■□□□□ 0.74
CHEK2-208ENST00000404276 BICRAQ9NZM4 1560 aa19.53■□□□□ 0.72
CHEK2-208ENST00000404276 PABPN1Q86U42 306 aaKnown RBP eCLIP19.44■□□□□ 0.7
CHEK2-208ENST00000404276 CECR2Q9BXF3 1484 aa19.08■□□□□ 0.65
CHEK2-208ENST00000404276 BAZ1AQ9NRL2 1556 aaPredicted RBP18.97■□□□□ 0.63
CHEK2-208ENST00000404276 EIF4G1Q04637 1599 aaKnown RBP18.96■□□□□ 0.63
CHEK2-208ENST00000404276 SMARCA4P51532 1647 aa18.94■□□□□ 0.62
CHEK2-208ENST00000404276 MROH2BQ7Z745 1585 aa18.93■□□□□ 0.62
CHEK2-208ENST00000404276 RSF1Q96T23 1441 aaPredicted RBP18.88■□□□□ 0.61
CHEK2-208ENST00000404276 CC2D2AQ9P2K1 1620 aa18.77■□□□□ 0.59
CHEK2-208ENST00000404276 PEG3Q9GZU2 1588 aa18.76■□□□□ 0.59
CHEK2-208ENST00000404276 WIZO95785 1651 aa18.74■□□□□ 0.59
CHEK2-208ENST00000404276 ATAD2BQ9ULI0 1458 aa18.73■□□□□ 0.59
CHEK2-208ENST00000404276 SMARCA2P51531 1590 aa18.71■□□□□ 0.59
CHEK2-208ENST00000404276 SUPT5HO00267 1087 aaKnown RBP18.7■□□□□ 0.58
CHEK2-208ENST00000404276 DNAJC5BQ9UF47 199 aa18.66■□□□□ 0.58
CHEK2-208ENST00000404276 NCAPD3P42695 1498 aa18.66■□□□□ 0.58
CHEK2-208ENST00000404276 HMGXB3Q12766 1538 aa18.59■□□□□ 0.57
CHEK2-208ENST00000404276 BAZ1BQ9UIG0 1483 aaKnown RBP18.58■□□□□ 0.57
CHEK2-208ENST00000404276 TOP2AP11388 1531 aaKnown RBP18.55■□□□□ 0.56
CHEK2-208ENST00000404276 CCDC88BA6NC98 1476 aa18.35■□□□□ 0.53
CHEK2-208ENST00000404276 CADPSQ9ULU8 1353 aa18.13■□□□□ 0.49
CHEK2-208ENST00000404276 CFTRP13569 1480 aa18.12■□□□□ 0.49
CHEK2-208ENST00000404276 NESP48681 1621 aa18.09■□□□□ 0.49
CHEK2-208ENST00000404276 LAMC3Q9Y6N6 1575 aa18.07■□□□□ 0.48
CHEK2-208ENST00000404276 PRDM2Q13029 1718 aa17.99■□□□□ 0.47
CHEK2-208ENST00000404276 PDS5BQ9NTI5 1447 aa17.93■□□□□ 0.46
CHEK2-208ENST00000404276 FANCD2Q9BXW9 1451 aa17.92■□□□□ 0.46
CHEK2-208ENST00000404276 KIF21AQ7Z4S6 1674 aa17.86■□□□□ 0.45
CHEK2-208ENST00000404276 CEP164Q9UPV0 1460 aa17.84■□□□□ 0.45
CHEK2-208ENST00000404276 ABCC8Q09428 1581 aa17.81■□□□□ 0.44
CHEK2-208ENST00000404276 ERCC6Q03468 1493 aa17.8■□□□□ 0.44
CHEK2-208ENST00000404276 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.43
CHEK2-208ENST00000404276 CHIC1Q5VXU3 224 aa17.74■□□□□ 0.43
CHEK2-208ENST00000404276 CUX1P39880 1505 aa17.73■□□□□ 0.43
CHEK2-208ENST00000404276 MRC2Q9UBG0 1479 aa17.73■□□□□ 0.43
CHEK2-208ENST00000404276 URB2Q14146 1524 aaKnown RBP17.72■□□□□ 0.43
CHEK2-208ENST00000404276 SYNJ1O43426 1573 aa17.71■□□□□ 0.43
CHEK2-208ENST00000404276 THOC2Q8NI27 1593 aaKnown RBP17.7■□□□□ 0.42
CHEK2-208ENST00000404276 DNMBPQ6XZF7 1577 aa17.69■□□□□ 0.42
CHEK2-208ENST00000404276 TOPBP1Q92547 1522 aa17.69■□□□□ 0.42
CHEK2-208ENST00000404276 TOP2BQ02880 1626 aa17.69■□□□□ 0.42
CHEK2-208ENST00000404276 BIVM-ERCC5R4GMW8 1640 aa17.67■□□□□ 0.42
CHEK2-208ENST00000404276 WDR62O43379 1518 aa17.66■□□□□ 0.42
CHEK2-208ENST00000404276 TRIM41Q8WV44 630 aa17.63■□□□□ 0.41
CHEK2-208ENST00000404276 FGD5Q6ZNL6 1462 aa17.58■□□□□ 0.41
CHEK2-208ENST00000404276 POLA1P09884 1462 aaPredicted RBP17.57■□□□□ 0.4
CHEK2-208ENST00000404276 CUX2O14529 1486 aa17.52■□□□□ 0.4
CHEK2-208ENST00000404276 SOGA1O94964 1423 aa17.49■□□□□ 0.39
CHEK2-208ENST00000404276 RAD54L2Q9Y4B4 1467 aa17.49■□□□□ 0.39
CHEK2-208ENST00000404276 TARBP1Q13395 1621 aaKnown RBP17.47■□□□□ 0.39
CHEK2-208ENST00000404276 IFT140Q96RY7 1462 aa17.45■□□□□ 0.38
CHEK2-208ENST00000404276 ABCA10Q8WWZ4 1543 aa17.44■□□□□ 0.38
CHEK2-208ENST00000404276 WDR97A6NE52 1622 aa17.42■□□□□ 0.38
CHEK2-208ENST00000404276 RUSC2Q8N2Y8 1516 aa17.36■□□□□ 0.37
CHEK2-208ENST00000404276 ZNF608Q9ULD9 1512 aaPredicted RBP17.36■□□□□ 0.37
CHEK2-208ENST00000404276 TDRD9Q8NDG6 1382 aaKnown RBP17.36■□□□□ 0.37
CHEK2-208ENST00000404276 KIF27Q86VH2 1401 aa17.35■□□□□ 0.37
CHEK2-208ENST00000404276 ABCA5Q8WWZ7 1642 aa17.33■□□□□ 0.36
CHEK2-208ENST00000404276 AQRO60306 1485 aaKnown RBP eCLIP17.32■□□□□ 0.361e-20■■■■■ 27.5
CHEK2-208ENST00000404276 EEA1Q15075 1411 aa17.3■□□□□ 0.36
CHEK2-208ENST00000404276 EIF4G3O43432 1585 aaKnown RBP17.3■□□□□ 0.36
CHEK2-208ENST00000404276 GAPVD1Q14C86 1478 aa17.3■□□□□ 0.36
CHEK2-208ENST00000404276 FAM9AQ8IZU1 332 aaPredicted RBP17.26■□□□□ 0.35
CHEK2-208ENST00000404276 IGF1RP08069 1367 aa17.25■□□□□ 0.35
CHEK2-208ENST00000404276 GRIN2BQ13224 1484 aa17.23■□□□□ 0.35
CHEK2-208ENST00000404276 ERICH3Q5RHP9 1530 aa17.23■□□□□ 0.35
CHEK2-208ENST00000404276 CSRNP3Q8WYN3 585 aa17.23■□□□□ 0.35
CHEK2-208ENST00000404276 PBRM1Q86U86 1689 aa17.22■□□□□ 0.35
CHEK2-208ENST00000404276 SNAPC4Q5SXM2 1469 aa17.16■□□□□ 0.34
CHEK2-208ENST00000404276 PRXQ9BXM0 1461 aa17.16■□□□□ 0.34
CHEK2-208ENST00000404276 CUL7Q14999 1698 aa17.15■□□□□ 0.34
CHEK2-208ENST00000404276 MAGI1Q96QZ7 1491 aaPredicted RBP17.14■□□□□ 0.33
CHEK2-208ENST00000404276 CARMIL1Q5VZK9 1371 aa17.13■□□□□ 0.33
CHEK2-208ENST00000404276 ADAMTS12P58397 1594 aa17.12■□□□□ 0.33
CHEK2-208ENST00000404276 FHAD1B1AJZ9 1412 aa17.12■□□□□ 0.33
CHEK2-208ENST00000404276 KIF21BO75037 1637 aa17.1■□□□□ 0.33
CHEK2-208ENST00000404276 RAPGEF2Q9Y4G8 1499 aa17.08■□□□□ 0.32
CHEK2-208ENST00000404276 SYNJ2O15056 1496 aa17.08■□□□□ 0.32
CHEK2-208ENST00000404276 GOLGA3Q08378 1498 aa17.03■□□□□ 0.32
CHEK2-208ENST00000404276 GRIN2AQ12879 1464 aa17.02■□□□□ 0.32
CHEK2-208ENST00000404276 CHMP7Q8WUX9 453 aaPredicted RBP17.02■□□□□ 0.31
CHEK2-208ENST00000404276 LOC105371045A0A1W2PR82 267 aa17.01■□□□□ 0.31
CHEK2-208ENST00000404276 EHMT2Q96KQ7 1210 aa17■□□□□ 0.31
CHEK2-208ENST00000404276 FBLN2P98095 1184 aa17■□□□□ 0.31
CHEK2-208ENST00000404276 CHD1O14646 1710 aa16.99■□□□□ 0.31
CHEK2-208ENST00000404276 UBTFP17480 764 aaKnown RBP16.94■□□□□ 0.3
CHEK2-208ENST00000404276 NUP160Q12769 1436 aa16.94■□□□□ 0.3
CHEK2-208ENST00000404276 CEP170Q5SW79 1584 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms