RNA–Protein interactions for RNA: ENST00000404084.5

VIT-205, Transcript of vitrin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VIT, Length 2,438 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIT-205ENST00000404084 NISCHQ9Y2I1 1504 aa22.99■■□□□ 1.27
VIT-205ENST00000404084 CCDC180Q9P1Z9 1646 aa20.03■□□□□ 0.8
VIT-205ENST00000404084 ZCCHC6Q5VYS8 1495 aaKnown RBP19.32■□□□□ 0.68
VIT-205ENST00000404084 DCAF8L2P0C7V8 631 aa19.02■□□□□ 0.64
VIT-205ENST00000404084 DCAF1Q9Y4B6 1507 aa19.02■□□□□ 0.63
VIT-205ENST00000404084 ABCC9O60706 1549 aa18.95■□□□□ 0.62
VIT-205ENST00000404084 MYO15BQ96JP2 1530 aa18.8■□□□□ 0.6
VIT-205ENST00000404084 SHROOM4Q9ULL8 1493 aa18.77■□□□□ 0.59
VIT-205ENST00000404084 NACADO15069 1562 aa18.68■□□□□ 0.58
VIT-205ENST00000404084 RB1CC1Q8TDY2 1594 aa18.51■□□□□ 0.55
VIT-205ENST00000404084 SCRIBQ14160 1630 aa18.42■□□□□ 0.54
VIT-205ENST00000404084 UNC13AQ9UPW8 1703 aa18.09■□□□□ 0.49
VIT-205ENST00000404084 SUPT5HO00267 1087 aaKnown RBP18.08■□□□□ 0.49
VIT-205ENST00000404084 BICRAQ9NZM4 1560 aa17.93■□□□□ 0.46
VIT-205ENST00000404084 PABPN1Q86U42 306 aaKnown RBP eCLIP17.89■□□□□ 0.45
VIT-205ENST00000404084 CECR2Q9BXF3 1484 aa17.85■□□□□ 0.45
VIT-205ENST00000404084 RSF1Q96T23 1441 aaPredicted RBP17.84■□□□□ 0.45
VIT-205ENST00000404084 BAZ1AQ9NRL2 1556 aaPredicted RBP17.76■□□□□ 0.43
VIT-205ENST00000404084 MROH2BQ7Z745 1585 aa17.75■□□□□ 0.43
VIT-205ENST00000404084 SMARCA4P51532 1647 aa17.66■□□□□ 0.42
VIT-205ENST00000404084 PELP1Q8IZL8 1130 aaKnown RBP17.62■□□□□ 0.41
VIT-205ENST00000404084 WIZO95785 1651 aa17.6■□□□□ 0.41
VIT-205ENST00000404084 PEG3Q9GZU2 1588 aa17.45■□□□□ 0.38
VIT-205ENST00000404084 TOP2AP11388 1531 aaKnown RBP17.43■□□□□ 0.38
VIT-205ENST00000404084 EIF4G1Q04637 1599 aaKnown RBP17.4■□□□□ 0.38
VIT-205ENST00000404084 ATAD2BQ9ULI0 1458 aa17.39■□□□□ 0.37
VIT-205ENST00000404084 SMARCA2P51531 1590 aa17.39■□□□□ 0.37
VIT-205ENST00000404084 CHIC1Q5VXU3 224 aa17.3■□□□□ 0.36
VIT-205ENST00000404084 BAZ1BQ9UIG0 1483 aaKnown RBP17.3■□□□□ 0.36
VIT-205ENST00000404084 CCDC88BA6NC98 1476 aa17.26■□□□□ 0.35
VIT-205ENST00000404084 NCAPD3P42695 1498 aa17.24■□□□□ 0.35
VIT-205ENST00000404084 HMGXB3Q12766 1538 aa17.21■□□□□ 0.35
VIT-205ENST00000404084 HRCP23327 699 aa17.18■□□□□ 0.34
VIT-205ENST00000404084 MYT1Q01538 1121 aa17.17■□□□□ 0.34
VIT-205ENST00000404084 CC2D2AQ9P2K1 1620 aa17.14■□□□□ 0.33
VIT-205ENST00000404084 TRIM41Q8WV44 630 aa17.02■□□□□ 0.32
VIT-205ENST00000404084 ABCC8Q09428 1581 aa16.88■□□□□ 0.29
VIT-205ENST00000404084 CFTRP13569 1480 aa16.86■□□□□ 0.29
VIT-205ENST00000404084 CADPSQ9ULU8 1353 aa16.81■□□□□ 0.28
VIT-205ENST00000404084 WRNQ14191 1432 aaPredicted RBP eCLIP16.81■□□□□ 0.28
VIT-205ENST00000404084 PRDM2Q13029 1718 aa16.74■□□□□ 0.27
VIT-205ENST00000404084 SYNJ1O43426 1573 aa16.7■□□□□ 0.26
VIT-205ENST00000404084 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
VIT-205ENST00000404084 FAM9AQ8IZU1 332 aaPredicted RBP16.69■□□□□ 0.26
VIT-205ENST00000404084 TOP2BQ02880 1626 aa16.65■□□□□ 0.26
VIT-205ENST00000404084 LAMC3Q9Y6N6 1575 aa16.65■□□□□ 0.26
VIT-205ENST00000404084 PPARGC1BQ86YN6 1023 aaKnown RBP16.65■□□□□ 0.26
VIT-205ENST00000404084 LOC105371045A0A1W2PR82 267 aa16.64■□□□□ 0.25
VIT-205ENST00000404084 NESP48681 1621 aa16.63■□□□□ 0.25
VIT-205ENST00000404084 BIVM-ERCC5R4GMW8 1640 aa16.62■□□□□ 0.25
VIT-205ENST00000404084 FANCD2Q9BXW9 1451 aa16.62■□□□□ 0.25
VIT-205ENST00000404084 CUX1P39880 1505 aa16.6■□□□□ 0.25
VIT-205ENST00000404084 SOGA1O94964 1423 aa16.58■□□□□ 0.25
VIT-205ENST00000404084 EEA1Q15075 1411 aa16.58■□□□□ 0.25
VIT-205ENST00000404084 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
VIT-205ENST00000404084 PDS5BQ9NTI5 1447 aa16.55■□□□□ 0.24
VIT-205ENST00000404084 CEP164Q9UPV0 1460 aa16.51■□□□□ 0.23
VIT-205ENST00000404084 RUSC2Q8N2Y8 1516 aa16.51■□□□□ 0.23
VIT-205ENST00000404084 CSRNP3Q8WYN3 585 aa16.49■□□□□ 0.23
VIT-205ENST00000404084 DNMBPQ6XZF7 1577 aa16.46■□□□□ 0.23
VIT-205ENST00000404084 EHMT2Q96KQ7 1210 aa16.44■□□□□ 0.22
VIT-205ENST00000404084 TOPBP1Q92547 1522 aa16.43■□□□□ 0.22
VIT-205ENST00000404084 FGD5Q6ZNL6 1462 aa16.43■□□□□ 0.22
VIT-205ENST00000404084 KIF21AQ7Z4S6 1674 aa16.41■□□□□ 0.22
VIT-205ENST00000404084 KIF27Q86VH2 1401 aa16.39■□□□□ 0.22
VIT-205ENST00000404084 PCGF6Q9BYE7 350 aa16.39■□□□□ 0.21
VIT-205ENST00000404084 URB2Q14146 1524 aaKnown RBP16.39■□□□□ 0.21
VIT-205ENST00000404084 POLA1P09884 1462 aaPredicted RBP16.35■□□□□ 0.21
VIT-205ENST00000404084 TTBK1Q5TCY1 1321 aaPredicted RBP16.35■□□□□ 0.21
VIT-205ENST00000404084 GOLGA3Q08378 1498 aa16.34■□□□□ 0.21
VIT-205ENST00000404084 CUX2O14529 1486 aa16.34■□□□□ 0.21
VIT-205ENST00000404084 KIF21BO75037 1637 aa16.34■□□□□ 0.21
VIT-205ENST00000404084 MRC2Q9UBG0 1479 aa16.31■□□□□ 0.2
VIT-205ENST00000404084 TNIKQ9UKE5 1360 aa16.3■□□□□ 0.2
VIT-205ENST00000404084 UBTFP17480 764 aaKnown RBP16.29■□□□□ 0.2
VIT-205ENST00000404084 RAD54L2Q9Y4B4 1467 aa16.29■□□□□ 0.2
VIT-205ENST00000404084 ABCA10Q8WWZ4 1543 aa16.29■□□□□ 0.2
VIT-205ENST00000404084 ERCC6Q03468 1493 aa16.27■□□□□ 0.2
VIT-205ENST00000404084 PRXQ9BXM0 1461 aa16.27■□□□□ 0.19
VIT-205ENST00000404084 RAPGEF2Q9Y4G8 1499 aa16.25■□□□□ 0.19
VIT-205ENST00000404084 ERICH3Q5RHP9 1530 aa16.24■□□□□ 0.19
VIT-205ENST00000404084 IGF1RP08069 1367 aa16.23■□□□□ 0.19
VIT-205ENST00000404084 WDR62O43379 1518 aa16.22■□□□□ 0.19
VIT-205ENST00000404084 CEP162Q5TB80 1403 aa16.21■□□□□ 0.18
VIT-205ENST00000404084 WDR97A6NE52 1622 aa16.2■□□□□ 0.18
VIT-205ENST00000404084 TARBP1Q13395 1621 aaKnown RBP16.16■□□□□ 0.18
VIT-205ENST00000404084 CARMIL1Q5VZK9 1371 aa16.16■□□□□ 0.18
VIT-205ENST00000404084 THOC2Q8NI27 1593 aaKnown RBP16.15■□□□□ 0.18
VIT-205ENST00000404084 TDRD9Q8NDG6 1382 aaKnown RBP16.15■□□□□ 0.18
VIT-205ENST00000404084 ABCA5Q8WWZ7 1642 aa16.13■□□□□ 0.17
VIT-205ENST00000404084 GAPVD1Q14C86 1478 aa16.13■□□□□ 0.17
VIT-205ENST00000404084 IFT140Q96RY7 1462 aa16.12■□□□□ 0.17
VIT-205ENST00000404084 CUL7Q14999 1698 aa16.1■□□□□ 0.17
VIT-205ENST00000404084 CLIP1P30622 1438 aa16.08■□□□□ 0.17
VIT-205ENST00000404084 AQRO60306 1485 aaKnown RBP eCLIP16.04■□□□□ 0.16
VIT-205ENST00000404084 RANGAP1P46060 587 aaPredicted RBP16.01■□□□□ 0.15
VIT-205ENST00000404084 ZNF608Q9ULD9 1512 aaPredicted RBP16.01■□□□□ 0.15
VIT-205ENST00000404084 GRIN2BQ13224 1484 aa16.01■□□□□ 0.15
VIT-205ENST00000404084 PBRM1Q86U86 1689 aa16■□□□□ 0.15
VIT-205ENST00000404084 ACIN1Q9UKV3 1341 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms