RNA–Protein interactions for RNA: ENST00000403949.5

C1S-204, Transcript of complement C1s, humanhuman

TSL 2

Gene C1S, Length 1,034 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-204ENST00000403949 NISCHQ9Y2I1 1504 aa26.28■■□□□ 1.8
C1S-204ENST00000403949 CCDC180Q9P1Z9 1646 aa23.08■■□□□ 1.29
C1S-204ENST00000403949 ZCCHC6Q5VYS8 1495 aaKnown RBP22.07■■□□□ 1.12
C1S-204ENST00000403949 DCAF1Q9Y4B6 1507 aa21.85■■□□□ 1.09
C1S-204ENST00000403949 ABCC9O60706 1549 aa21.79■■□□□ 1.08
C1S-204ENST00000403949 MYO15BQ96JP2 1530 aa21.7■■□□□ 1.06
C1S-204ENST00000403949 DCAF8L2P0C7V8 631 aa21.65■■□□□ 1.06
C1S-204ENST00000403949 NACADO15069 1562 aa21.56■■□□□ 1.04
C1S-204ENST00000403949 RB1CC1Q8TDY2 1594 aa21.39■■□□□ 1.01
C1S-204ENST00000403949 SHROOM4Q9ULL8 1493 aa21.15■□□□□ 0.98
C1S-204ENST00000403949 SCRIBQ14160 1630 aa21.06■□□□□ 0.96
C1S-204ENST00000403949 UNC13AQ9UPW8 1703 aa20.71■□□□□ 0.91
C1S-204ENST00000403949 BICRAQ9NZM4 1560 aa20.55■□□□□ 0.88
C1S-204ENST00000403949 PABPN1Q86U42 306 aaKnown RBP eCLIP20.45■□□□□ 0.86
C1S-204ENST00000403949 BAZ1AQ9NRL2 1556 aaPredicted RBP20.38■□□□□ 0.85
C1S-204ENST00000403949 SUPT5HO00267 1087 aaKnown RBP20.33■□□□□ 0.85
C1S-204ENST00000403949 CECR2Q9BXF3 1484 aa20.29■□□□□ 0.84
C1S-204ENST00000403949 RSF1Q96T23 1441 aaPredicted RBP20.28■□□□□ 0.84
C1S-204ENST00000403949 SMARCA4P51532 1647 aa20.23■□□□□ 0.83
C1S-204ENST00000403949 MROH2BQ7Z745 1585 aa20.2■□□□□ 0.82
C1S-204ENST00000403949 PEG3Q9GZU2 1588 aa20.05■□□□□ 0.8
C1S-204ENST00000403949 EIF4G1Q04637 1599 aaKnown RBP20.04■□□□□ 0.8
C1S-204ENST00000403949 SMARCA2P51531 1590 aa20.04■□□□□ 0.8
C1S-204ENST00000403949 WIZO95785 1651 aa20■□□□□ 0.79
C1S-204ENST00000403949 TOP2AP11388 1531 aaKnown RBP19.95■□□□□ 0.78
C1S-204ENST00000403949 ATAD2BQ9ULI0 1458 aa19.93■□□□□ 0.78
C1S-204ENST00000403949 BAZ1BQ9UIG0 1483 aaKnown RBP19.87■□□□□ 0.77
C1S-204ENST00000403949 HMGXB3Q12766 1538 aa19.85■□□□□ 0.77
C1S-204ENST00000403949 NCAPD3P42695 1498 aa19.84■□□□□ 0.77
C1S-204ENST00000403949 CC2D2AQ9P2K1 1620 aa19.74■□□□□ 0.75
C1S-204ENST00000403949 CCDC88BA6NC98 1476 aa19.65■□□□□ 0.74
C1S-204ENST00000403949 CHIC1Q5VXU3 224 aa19.38■□□□□ 0.69
C1S-204ENST00000403949 CFTRP13569 1480 aa19.35■□□□□ 0.69
C1S-204ENST00000403949 CADPSQ9ULU8 1353 aa19.32■□□□□ 0.68
C1S-204ENST00000403949 TRIM41Q8WV44 630 aa19.25■□□□□ 0.67
C1S-204ENST00000403949 LAMC3Q9Y6N6 1575 aa19.23■□□□□ 0.67
C1S-204ENST00000403949 PRDM2Q13029 1718 aa19.22■□□□□ 0.67
C1S-204ENST00000403949 WRNQ14191 1432 aaPredicted RBP eCLIP19.17■□□□□ 0.66
C1S-204ENST00000403949 DNAJC5BQ9UF47 199 aa19.17■□□□□ 0.66
C1S-204ENST00000403949 PDS5BQ9NTI5 1447 aa19.12■□□□□ 0.65
C1S-204ENST00000403949 ABCC8Q09428 1581 aa19.11■□□□□ 0.65
C1S-204ENST00000403949 FANCD2Q9BXW9 1451 aa19.08■□□□□ 0.64
C1S-204ENST00000403949 CEP164Q9UPV0 1460 aa19.03■□□□□ 0.64
C1S-204ENST00000403949 TOP2BQ02880 1626 aa19.02■□□□□ 0.64
C1S-204ENST00000403949 NESP48681 1621 aa19.01■□□□□ 0.63
C1S-204ENST00000403949 BIVM-ERCC5R4GMW8 1640 aa18.99■□□□□ 0.63
C1S-204ENST00000403949 SYNJ1O43426 1573 aa18.98■□□□□ 0.63
C1S-204ENST00000403949 EEA1Q15075 1411 aa18.96■□□□□ 0.63
C1S-204ENST00000403949 CUX1P39880 1505 aa18.93■□□□□ 0.62
C1S-204ENST00000403949 DNMBPQ6XZF7 1577 aa18.91■□□□□ 0.62
C1S-204ENST00000403949 ERCC6Q03468 1493 aa18.85■□□□□ 0.61
C1S-204ENST00000403949 TOPBP1Q92547 1522 aa18.84■□□□□ 0.61
C1S-204ENST00000403949 KIF21AQ7Z4S6 1674 aa18.83■□□□□ 0.61
C1S-204ENST00000403949 MRC2Q9UBG0 1479 aa18.83■□□□□ 0.6
C1S-204ENST00000403949 FGD5Q6ZNL6 1462 aa18.78■□□□□ 0.6
C1S-204ENST00000403949 URB2Q14146 1524 aaKnown RBP18.77■□□□□ 0.6
C1S-204ENST00000403949 KIF27Q86VH2 1401 aa18.76■□□□□ 0.59
C1S-204ENST00000403949 SOGA1O94964 1423 aa18.74■□□□□ 0.59
C1S-204ENST00000403949 POLA1P09884 1462 aaPredicted RBP18.72■□□□□ 0.59
C1S-204ENST00000403949 FAM9AQ8IZU1 332 aaPredicted RBP18.72■□□□□ 0.59
C1S-204ENST00000403949 WDR62O43379 1518 aa18.72■□□□□ 0.59
C1S-204ENST00000403949 CSRNP3Q8WYN3 585 aa18.7■□□□□ 0.58
C1S-204ENST00000403949 ABCA10Q8WWZ4 1543 aa18.68■□□□□ 0.58
C1S-204ENST00000403949 AEBP2Q6ZN18 517 aaPredicted RBP18.67■□□□□ 0.58
C1S-204ENST00000403949 CUX2O14529 1486 aa18.66■□□□□ 0.58
C1S-204ENST00000403949 THOC2Q8NI27 1593 aaKnown RBP18.63■□□□□ 0.57
C1S-204ENST00000403949 IFT140Q96RY7 1462 aa18.6■□□□□ 0.57
C1S-204ENST00000403949 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
C1S-204ENST00000403949 KIF21BO75037 1637 aa18.6■□□□□ 0.57
C1S-204ENST00000403949 GOLGA3Q08378 1498 aa18.59■□□□□ 0.57
C1S-204ENST00000403949 RUSC2Q8N2Y8 1516 aa18.59■□□□□ 0.57
C1S-204ENST00000403949 RAD54L2Q9Y4B4 1467 aa18.58■□□□□ 0.56
C1S-204ENST00000403949 ERICH3Q5RHP9 1530 aa18.54■□□□□ 0.56
C1S-204ENST00000403949 TARBP1Q13395 1621 aaKnown RBP18.52■□□□□ 0.56
C1S-204ENST00000403949 LOC105371045A0A1W2PR82 267 aa18.52■□□□□ 0.56
C1S-204ENST00000403949 PRXQ9BXM0 1461 aa18.51■□□□□ 0.55
C1S-204ENST00000403949 GAPVD1Q14C86 1478 aa18.5■□□□□ 0.55
C1S-204ENST00000403949 ABCA5Q8WWZ7 1642 aa18.49■□□□□ 0.55
C1S-204ENST00000403949 CUL7Q14999 1698 aa18.48■□□□□ 0.55
C1S-204ENST00000403949 IGF1RP08069 1367 aa18.48■□□□□ 0.55
C1S-204ENST00000403949 TNIKQ9UKE5 1360 aa18.47■□□□□ 0.55
C1S-204ENST00000403949 UBTFP17480 764 aaKnown RBP18.45■□□□□ 0.54
C1S-204ENST00000403949 CARMIL1Q5VZK9 1371 aa18.44■□□□□ 0.54
C1S-204ENST00000403949 RAPGEF2Q9Y4G8 1499 aa18.44■□□□□ 0.54
C1S-204ENST00000403949 TDRD9Q8NDG6 1382 aaKnown RBP18.43■□□□□ 0.54
C1S-204ENST00000403949 GRIN2BQ13224 1484 aa18.41■□□□□ 0.54
C1S-204ENST00000403949 EHMT2Q96KQ7 1210 aa18.37■□□□□ 0.53
C1S-204ENST00000403949 PBRM1Q86U86 1689 aa18.35■□□□□ 0.53
C1S-204ENST00000403949 EIF4G3O43432 1585 aaKnown RBP18.34■□□□□ 0.53
C1S-204ENST00000403949 FHAD1B1AJZ9 1412 aa18.34■□□□□ 0.53
C1S-204ENST00000403949 AQRO60306 1485 aaKnown RBP eCLIP18.33■□□□□ 0.53
C1S-204ENST00000403949 CEP162Q5TB80 1403 aa18.32■□□□□ 0.52
C1S-204ENST00000403949 ZNF608Q9ULD9 1512 aaPredicted RBP18.32■□□□□ 0.52
C1S-204ENST00000403949 MAGI1Q96QZ7 1491 aaPredicted RBP18.32■□□□□ 0.52
C1S-204ENST00000403949 ADAMTS12P58397 1594 aa18.29■□□□□ 0.52
C1S-204ENST00000403949 CLIP1P30622 1438 aa18.25■□□□□ 0.51
C1S-204ENST00000403949 SNAPC4Q5SXM2 1469 aa18.24■□□□□ 0.51
C1S-204ENST00000403949 SYNJ2O15056 1496 aa18.2■□□□□ 0.5
C1S-204ENST00000403949 CTTNBP2Q8WZ74 1663 aa18.16■□□□□ 0.5
C1S-204ENST00000403949 GRIN2AQ12879 1464 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms