RNA–Protein interactions for RNA: ENST00000402311.5

RABGAP1-203, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 4

Gene RABGAP1, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-203ENST00000402311 NISCHQ9Y2I1 1504 aa34.43■■■■□ 3.1
RABGAP1-203ENST00000402311 ABCC9O60706 1549 aa33.61■■■□□ 2.97
RABGAP1-203ENST00000402311 DNAJC5BQ9UF47 199 aa33.11■■■□□ 2.89
RABGAP1-203ENST00000402311 DNAJC5Q9H3Z4 198 aa31.81■■■□□ 2.68
RABGAP1-203ENST00000402311 CCDC180Q9P1Z9 1646 aa31.71■■■□□ 2.67
RABGAP1-203ENST00000402311 RB1CC1Q8TDY2 1594 aa31.14■■■□□ 2.58
RABGAP1-203ENST00000402311 PABPN1Q86U42 306 aaKnown RBP eCLIP31.01■■■□□ 2.55
RABGAP1-203ENST00000402311 CECR2Q9BXF3 1484 aa30.47■■■□□ 2.47
RABGAP1-203ENST00000402311 NACADO15069 1562 aa30.43■■■□□ 2.46
RABGAP1-203ENST00000402311 UNC13AQ9UPW8 1703 aa30.36■■■□□ 2.45
RABGAP1-203ENST00000402311 CC2D2AQ9P2K1 1620 aa30.23■■■□□ 2.43
RABGAP1-203ENST00000402311 BICRAQ9NZM4 1560 aa30.22■■■□□ 2.43
RABGAP1-203ENST00000402311 DCAF8L2P0C7V8 631 aa30.07■■■□□ 2.4
RABGAP1-203ENST00000402311 TRIM41Q8WV44 630 aa29.79■■■□□ 2.36
RABGAP1-203ENST00000402311 CUX2O14529 1486 aa29.7■■■□□ 2.35
RABGAP1-203ENST00000402311 EIF4G1Q04637 1599 aaKnown RBP29.69■■■□□ 2.34
RABGAP1-203ENST00000402311 SHROOM4Q9ULL8 1493 aa29.64■■■□□ 2.34
RABGAP1-203ENST00000402311 MYO15BQ96JP2 1530 aa29.32■■■□□ 2.28
RABGAP1-203ENST00000402311 ERCC6Q03468 1493 aa29.22■■■□□ 2.27
RABGAP1-203ENST00000402311 SCRIBQ14160 1630 aa28.87■■■□□ 2.21
RABGAP1-203ENST00000402311 AEBP2Q6ZN18 517 aaPredicted RBP28.58■■■□□ 2.17
RABGAP1-203ENST00000402311 THOC2Q8NI27 1593 aaKnown RBP28.37■■■□□ 2.13
RABGAP1-203ENST00000402311 NESP48681 1621 aa28.3■■■□□ 2.12
RABGAP1-203ENST00000402311 DCAF1Q9Y4B6 1507 aa28.27■■■□□ 2.12
RABGAP1-203ENST00000402311 SMARCA2P51531 1590 aa28.11■■■□□ 2.09
RABGAP1-203ENST00000402311 ZCCHC6Q5VYS8 1495 aaKnown RBP28.11■■■□□ 2.09
RABGAP1-203ENST00000402311 NCAPD3P42695 1498 aa28.09■■■□□ 2.09
RABGAP1-203ENST00000402311 OSCARQ8IYS5 282 aa28.08■■■□□ 2.09
RABGAP1-203ENST00000402311 BAZ1AQ9NRL2 1556 aaPredicted RBP28.07■■■□□ 2.08
RABGAP1-203ENST00000402311 TRHP20396 242 aaPredicted RBP27.97■■■□□ 2.07
RABGAP1-203ENST00000402311 RIMBP3CA6NJZ7 1639 aa27.89■■■□□ 2.06
RABGAP1-203ENST00000402311 RIMBP3BA6NNM3 1639 aa27.89■■■□□ 2.06
RABGAP1-203ENST00000402311 RIMBP3Q9UFD9 1639 aa27.89■■■□□ 2.06
RABGAP1-203ENST00000402311 KIF21AQ7Z4S6 1674 aa27.88■■■□□ 2.05
RABGAP1-203ENST00000402311 LAMC3Q9Y6N6 1575 aa27.8■■■□□ 2.04
RABGAP1-203ENST00000402311 ATAD2BQ9ULI0 1458 aa27.76■■■□□ 2.04
RABGAP1-203ENST00000402311 PDS5BQ9NTI5 1447 aa27.75■■■□□ 2.03
RABGAP1-203ENST00000402311 HMGXB3Q12766 1538 aa27.72■■■□□ 2.03
RABGAP1-203ENST00000402311 ILDR1Q86SU0 546 aaPredicted RBP27.62■■■□□ 2.01
RABGAP1-203ENST00000402311 MRC2Q9UBG0 1479 aa27.6■■■□□ 2.01
RABGAP1-203ENST00000402311 ARHGEF11O15085 1522 aa27.6■■■□□ 2.01
RABGAP1-203ENST00000402311 CYB5RLQ6IPT4 315 aa27.59■■■□□ 2.01
RABGAP1-203ENST00000402311 WDR62O43379 1518 aa27.56■■■□□ 2
RABGAP1-203ENST00000402311 BAZ1BQ9UIG0 1483 aaKnown RBP27.45■■□□□ 1.99
RABGAP1-203ENST00000402311 SMARCA4P51532 1647 aa27.27■■□□□ 1.96
RABGAP1-203ENST00000402311 CADPSQ9ULU8 1353 aa27.19■■□□□ 1.94
RABGAP1-203ENST00000402311 ARAP1Q96P48 1450 aa27.19■■□□□ 1.94
RABGAP1-203ENST00000402311 CEP164Q9UPV0 1460 aa27.13■■□□□ 1.93
RABGAP1-203ENST00000402311 PEG3Q9GZU2 1588 aa26.96■■□□□ 1.91
RABGAP1-203ENST00000402311 FANCD2Q9BXW9 1451 aa26.91■■□□□ 1.9
RABGAP1-203ENST00000402311 RSF1Q96T23 1441 aaPredicted RBP26.83■■□□□ 1.89
RABGAP1-203ENST00000402311 URB2Q14146 1524 aaKnown RBP26.77■■□□□ 1.88
RABGAP1-203ENST00000402311 ZNF608Q9ULD9 1512 aaPredicted RBP26.76■■□□□ 1.87
RABGAP1-203ENST00000402311 CHD1O14646 1710 aa26.7■■□□□ 1.87
RABGAP1-203ENST00000402311 FBLN2P98095 1184 aa26.64■■□□□ 1.86
RABGAP1-203ENST00000402311 IFT140Q96RY7 1462 aa26.63■■□□□ 1.85
RABGAP1-203ENST00000402311 EIF4G3O43432 1585 aaKnown RBP26.54■■□□□ 1.84
RABGAP1-203ENST00000402311 MROH2BQ7Z745 1585 aa26.5■■□□□ 1.83
RABGAP1-203ENST00000402311 CFTRP13569 1480 aa26.46■■□□□ 1.83
RABGAP1-203ENST00000402311 KDM4FA0A1W2PPD8 638 aa26.44■■□□□ 1.82
RABGAP1-203ENST00000402311 AQRO60306 1485 aaKnown RBP eCLIP26.31■■□□□ 1.86e-6■■■■□ 23.2
RABGAP1-203ENST00000402311 CLASP1Q7Z460 1538 aa26.3■■□□□ 1.8
RABGAP1-203ENST00000402311 GAPVD1Q14C86 1478 aa26.25■■□□□ 1.79
RABGAP1-203ENST00000402311 FBXO41Q8TF61 875 aa26.24■■□□□ 1.79
RABGAP1-203ENST00000402311 ERCC6L2Q5T890 1561 aa26.24■■□□□ 1.79
RABGAP1-203ENST00000402311 SYNJ1O43426 1573 aa26.19■■□□□ 1.78
RABGAP1-203ENST00000402311 LMTK3Q96Q04 1460 aa26.18■■□□□ 1.78
RABGAP1-203ENST00000402311 TOPBP1Q92547 1522 aa26.17■■□□□ 1.78
RABGAP1-203ENST00000402311 WIZO95785 1651 aa26.12■■□□□ 1.77
RABGAP1-203ENST00000402311 KIF13AQ9H1H9 1805 aa26.1■■□□□ 1.77
RABGAP1-203ENST00000402311 CHMP7Q8WUX9 453 aaPredicted RBP26.08■■□□□ 1.77
RABGAP1-203ENST00000402311 HECW2Q9P2P5 1572 aa26.07■■□□□ 1.76
RABGAP1-203ENST00000402311 PRDM2Q13029 1718 aa26.05■■□□□ 1.76
RABGAP1-203ENST00000402311 TARBP1Q13395 1621 aaKnown RBP26.05■■□□□ 1.76
RABGAP1-203ENST00000402311 ABCC8Q09428 1581 aa26■■□□□ 1.75
RABGAP1-203ENST00000402311 SNAPC4Q5SXM2 1469 aa25.99■■□□□ 1.75
RABGAP1-203ENST00000402311 SOCS7O14512 581 aa25.99■■□□□ 1.75
RABGAP1-203ENST00000402311 KDM6BO15054 1643 aa25.93■■□□□ 1.74
RABGAP1-203ENST00000402311 DNMBPQ6XZF7 1577 aa25.91■■□□□ 1.74
RABGAP1-203ENST00000402311 TDRD9Q8NDG6 1382 aaKnown RBP25.86■■□□□ 1.73
RABGAP1-203ENST00000402311 FAM69CQ0P6D2 419 aa25.86■■□□□ 1.73
RABGAP1-203ENST00000402311 ADGRL1O94910 1474 aa25.83■■□□□ 1.73
RABGAP1-203ENST00000402311 MAGI1Q96QZ7 1491 aaPredicted RBP25.82■■□□□ 1.72
RABGAP1-203ENST00000402311 POLA1P09884 1462 aaPredicted RBP25.79■■□□□ 1.72
RABGAP1-203ENST00000402311 SYNJ2O15056 1496 aa25.78■■□□□ 1.72
RABGAP1-203ENST00000402311 ILDR2Q71H61 639 aa25.77■■□□□ 1.72
RABGAP1-203ENST00000402311 RAD54L2Q9Y4B4 1467 aa25.74■■□□□ 1.71
RABGAP1-203ENST00000402311 ABCC10Q5T3U5 1492 aa25.72■■□□□ 1.71
RABGAP1-203ENST00000402311 SOGA1O94964 1423 aa25.67■■□□□ 1.7
RABGAP1-203ENST00000402311 DISP3Q9P2K9 1392 aa25.67■■□□□ 1.7
RABGAP1-203ENST00000402311 WDR97A6NE52 1622 aa25.66■■□□□ 1.7
RABGAP1-203ENST00000402311 TOP2AP11388 1531 aaKnown RBP25.66■■□□□ 1.7
RABGAP1-203ENST00000402311 GRIN2BQ13224 1484 aa25.65■■□□□ 1.7
RABGAP1-203ENST00000402311 DIP2BQ9P265 1576 aa25.6■■□□□ 1.69
RABGAP1-203ENST00000402311 TSPOAP1O95153 1857 aa25.57■■□□□ 1.68
RABGAP1-203ENST00000402311 CEP170Q5SW79 1584 aa25.56■■□□□ 1.68
RABGAP1-203ENST00000402311 NPM1P06748 294 aaKnown RBP eCLIP25.55■■□□□ 1.68
RABGAP1-203ENST00000402311 MAPKBP1O60336 1514 aa25.47■■□□□ 1.67
RABGAP1-203ENST00000402311 PBRM1Q86U86 1689 aa25.42■■□□□ 1.66
RABGAP1-203ENST00000402311 CCDC88BA6NC98 1476 aa25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms