RNA–Protein interactions for RNA: ENST00000402218.1

MAPRE3-202, Transcript of microtubule associated protein RP/EB family member 3, humanhuman

TSL 5 BASIC

Gene MAPRE3, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAPRE3-202ENST00000402218 NISCHQ9Y2I1 1504 aa21.83■■□□□ 1.09
MAPRE3-202ENST00000402218 ABCC9O60706 1549 aa20.97■□□□□ 0.95
MAPRE3-202ENST00000402218 DNAJC5BQ9UF47 199 aa20.69■□□□□ 0.9
MAPRE3-202ENST00000402218 CCDC180Q9P1Z9 1646 aa19.8■□□□□ 0.76
MAPRE3-202ENST00000402218 DNAJC5Q9H3Z4 198 aa19.58■□□□□ 0.72
MAPRE3-202ENST00000402218 PABPN1Q86U42 306 aaKnown RBP eCLIP19.51■□□□□ 0.71
MAPRE3-202ENST00000402218 RB1CC1Q8TDY2 1594 aa19.39■□□□□ 0.69
MAPRE3-202ENST00000402218 NACADO15069 1562 aa19.04■□□□□ 0.64
MAPRE3-202ENST00000402218 DCAF8L2P0C7V8 631 aa19.02■□□□□ 0.64
MAPRE3-202ENST00000402218 BICRAQ9NZM4 1560 aa18.96■□□□□ 0.63
MAPRE3-202ENST00000402218 CECR2Q9BXF3 1484 aa18.96■□□□□ 0.63
MAPRE3-202ENST00000402218 UNC13AQ9UPW8 1703 aa18.89■□□□□ 0.61
MAPRE3-202ENST00000402218 CC2D2AQ9P2K1 1620 aa18.81■□□□□ 0.6
MAPRE3-202ENST00000402218 EIF4G1Q04637 1599 aaKnown RBP18.54■□□□□ 0.56
MAPRE3-202ENST00000402218 MYO15BQ96JP2 1530 aa18.46■□□□□ 0.55
MAPRE3-202ENST00000402218 SHROOM4Q9ULL8 1493 aa18.45■□□□□ 0.54
MAPRE3-202ENST00000402218 TRIM41Q8WV44 630 aa18.36■□□□□ 0.53
MAPRE3-202ENST00000402218 CUX2O14529 1486 aa18.35■□□□□ 0.53
MAPRE3-202ENST00000402218 SCRIBQ14160 1630 aa18.16■□□□□ 0.5
MAPRE3-202ENST00000402218 ERCC6Q03468 1493 aa18.11■□□□□ 0.49
MAPRE3-202ENST00000402218 DCAF1Q9Y4B6 1507 aa17.88■□□□□ 0.45
MAPRE3-202ENST00000402218 ZCCHC6Q5VYS8 1495 aaKnown RBP17.86■□□□□ 0.45
MAPRE3-202ENST00000402218 NESP48681 1621 aa17.77■□□□□ 0.44
MAPRE3-202ENST00000402218 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
MAPRE3-202ENST00000402218 THOC2Q8NI27 1593 aaKnown RBP17.63■□□□□ 0.41
MAPRE3-202ENST00000402218 ATAD2BQ9ULI0 1458 aa17.51■□□□□ 0.39
MAPRE3-202ENST00000402218 SMARCA2P51531 1590 aa17.5■□□□□ 0.39
MAPRE3-202ENST00000402218 OSCARQ8IYS5 282 aa17.5■□□□□ 0.39
MAPRE3-202ENST00000402218 AEBP2Q6ZN18 517 aaPredicted RBP17.43■□□□□ 0.38
MAPRE3-202ENST00000402218 HMGXB3Q12766 1538 aa17.37■□□□□ 0.37
MAPRE3-202ENST00000402218 KIF21AQ7Z4S6 1674 aa17.34■□□□□ 0.37
MAPRE3-202ENST00000402218 BAZ1AQ9NRL2 1556 aaPredicted RBP17.34■□□□□ 0.37
MAPRE3-202ENST00000402218 PDS5BQ9NTI5 1447 aa17.34■□□□□ 0.37
MAPRE3-202ENST00000402218 LAMC3Q9Y6N6 1575 aa17.32■□□□□ 0.36
MAPRE3-202ENST00000402218 TRHP20396 242 aaPredicted RBP17.29■□□□□ 0.36
MAPRE3-202ENST00000402218 RIMBP3CA6NJZ7 1639 aa17.25■□□□□ 0.35
MAPRE3-202ENST00000402218 RIMBP3BA6NNM3 1639 aa17.25■□□□□ 0.35
MAPRE3-202ENST00000402218 RIMBP3Q9UFD9 1639 aa17.25■□□□□ 0.35
MAPRE3-202ENST00000402218 BAZ1BQ9UIG0 1483 aaKnown RBP17.24■□□□□ 0.35
MAPRE3-202ENST00000402218 MRC2Q9UBG0 1479 aa17.24■□□□□ 0.35
MAPRE3-202ENST00000402218 CYB5RLQ6IPT4 315 aa17.2■□□□□ 0.34
MAPRE3-202ENST00000402218 WDR62O43379 1518 aa17.2■□□□□ 0.34
MAPRE3-202ENST00000402218 SMARCA4P51532 1647 aa17.17■□□□□ 0.34
MAPRE3-202ENST00000402218 CADPSQ9ULU8 1353 aa17.14■□□□□ 0.33
MAPRE3-202ENST00000402218 ARHGEF11O15085 1522 aa17.12■□□□□ 0.33
MAPRE3-202ENST00000402218 PEG3Q9GZU2 1588 aa16.98■□□□□ 0.31
MAPRE3-202ENST00000402218 CEP164Q9UPV0 1460 aa16.97■□□□□ 0.31
MAPRE3-202ENST00000402218 ARAP1Q96P48 1450 aa16.93■□□□□ 0.3
MAPRE3-202ENST00000402218 ILDR1Q86SU0 546 aaPredicted RBP16.92■□□□□ 0.3
MAPRE3-202ENST00000402218 FANCD2Q9BXW9 1451 aa16.91■□□□□ 0.3
MAPRE3-202ENST00000402218 MROH2BQ7Z745 1585 aa16.86■□□□□ 0.29
MAPRE3-202ENST00000402218 URB2Q14146 1524 aaKnown RBP16.86■□□□□ 0.29
MAPRE3-202ENST00000402218 ZNF608Q9ULD9 1512 aaPredicted RBP16.84■□□□□ 0.29
MAPRE3-202ENST00000402218 SUPT5HO00267 1087 aaKnown RBP16.78■□□□□ 0.28
MAPRE3-202ENST00000402218 CFTRP13569 1480 aa16.71■□□□□ 0.27
MAPRE3-202ENST00000402218 RSF1Q96T23 1441 aaPredicted RBP16.7■□□□□ 0.26
MAPRE3-202ENST00000402218 FBLN2P98095 1184 aa16.69■□□□□ 0.26
MAPRE3-202ENST00000402218 IFT140Q96RY7 1462 aa16.68■□□□□ 0.26
MAPRE3-202ENST00000402218 AQRO60306 1485 aaKnown RBP eCLIP16.59■□□□□ 0.255e-9■■■□□ 17.8
MAPRE3-202ENST00000402218 CHD1O14646 1710 aa16.57■□□□□ 0.24
MAPRE3-202ENST00000402218 WIZO95785 1651 aa16.55■□□□□ 0.24
MAPRE3-202ENST00000402218 EIF4G3O43432 1585 aaKnown RBP16.55■□□□□ 0.24
MAPRE3-202ENST00000402218 KDM4FA0A1W2PPD8 638 aa16.48■□□□□ 0.23
MAPRE3-202ENST00000402218 TOPBP1Q92547 1522 aa16.47■□□□□ 0.23
MAPRE3-202ENST00000402218 CLASP1Q7Z460 1538 aa16.43■□□□□ 0.22
MAPRE3-202ENST00000402218 GAPVD1Q14C86 1478 aa16.38■□□□□ 0.21
MAPRE3-202ENST00000402218 CHMP7Q8WUX9 453 aaPredicted RBP16.38■□□□□ 0.21
MAPRE3-202ENST00000402218 TARBP1Q13395 1621 aaKnown RBP16.36■□□□□ 0.21
MAPRE3-202ENST00000402218 TDRD9Q8NDG6 1382 aaKnown RBP16.36■□□□□ 0.21
MAPRE3-202ENST00000402218 SNAPC4Q5SXM2 1469 aa16.31■□□□□ 0.2
MAPRE3-202ENST00000402218 ABCC8Q09428 1581 aa16.3■□□□□ 0.2
MAPRE3-202ENST00000402218 RAD54L2Q9Y4B4 1467 aa16.29■□□□□ 0.2
MAPRE3-202ENST00000402218 CHIC1Q5VXU3 224 aa16.29■□□□□ 0.2
MAPRE3-202ENST00000402218 SYNJ1O43426 1573 aa16.29■□□□□ 0.2
MAPRE3-202ENST00000402218 DNMBPQ6XZF7 1577 aa16.26■□□□□ 0.19
MAPRE3-202ENST00000402218 POLA1P09884 1462 aaPredicted RBP16.26■□□□□ 0.19
MAPRE3-202ENST00000402218 TOP2AP11388 1531 aaKnown RBP16.24■□□□□ 0.19
MAPRE3-202ENST00000402218 SOGA1O94964 1423 aa16.2■□□□□ 0.18
MAPRE3-202ENST00000402218 ERCC6L2Q5T890 1561 aa16.2■□□□□ 0.18
MAPRE3-202ENST00000402218 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
MAPRE3-202ENST00000402218 CCDC88BA6NC98 1476 aa16.17■□□□□ 0.18
MAPRE3-202ENST00000402218 FAM69CQ0P6D2 419 aa16.17■□□□□ 0.18
MAPRE3-202ENST00000402218 MAGI1Q96QZ7 1491 aaPredicted RBP16.16■□□□□ 0.18
MAPRE3-202ENST00000402218 SYNJ2O15056 1496 aa16.16■□□□□ 0.18
MAPRE3-202ENST00000402218 KIF13AQ9H1H9 1805 aa16.15■□□□□ 0.18
MAPRE3-202ENST00000402218 GRIN2BQ13224 1484 aa16.11■□□□□ 0.17
MAPRE3-202ENST00000402218 FBXO41Q8TF61 875 aa16.11■□□□□ 0.17
MAPRE3-202ENST00000402218 ABCC10Q5T3U5 1492 aa16.04■□□□□ 0.16
MAPRE3-202ENST00000402218 HECW2Q9P2P5 1572 aa16.03■□□□□ 0.16
MAPRE3-202ENST00000402218 FGD5Q6ZNL6 1462 aa16.02■□□□□ 0.15
MAPRE3-202ENST00000402218 CEP170Q5SW79 1584 aa16■□□□□ 0.15
MAPRE3-202ENST00000402218 WDR97A6NE52 1622 aa16■□□□□ 0.15
MAPRE3-202ENST00000402218 KDM6BO15054 1643 aa16■□□□□ 0.15
MAPRE3-202ENST00000402218 ADGRL1O94910 1474 aa15.98■□□□□ 0.15
MAPRE3-202ENST00000402218 LMTK3Q96Q04 1460 aa15.94■□□□□ 0.14
MAPRE3-202ENST00000402218 NPM1P06748 294 aaKnown RBP eCLIP15.93■□□□□ 0.14
MAPRE3-202ENST00000402218 NUP160Q12769 1436 aa15.91■□□□□ 0.14
MAPRE3-202ENST00000402218 DIP2BQ9P265 1576 aa15.91■□□□□ 0.14
MAPRE3-202ENST00000402218 GRIN2AQ12879 1464 aa15.91■□□□□ 0.14
MAPRE3-202ENST00000402218 ILDR2Q71H61 639 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms