RNA–Protein interactions for RNA: ENST00000401360.1

MIR541-201, microRNA 541, humanhuman

BASIC

Gene MIR541, Length 84 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR541-201ENST00000401360 NISCHQ9Y2I1 1504 aa14.57□□□□□ -0.08
MIR541-201ENST00000401360 CCDC180Q9P1Z9 1646 aa12.66□□□□□ -0.38
MIR541-201ENST00000401360 ZCCHC6Q5VYS8 1495 aaKnown RBP12.27□□□□□ -0.44
MIR541-201ENST00000401360 DCAF1Q9Y4B6 1507 aa12.15□□□□□ -0.46
MIR541-201ENST00000401360 DCAF8L2P0C7V8 631 aa11.96□□□□□ -0.49
MIR541-201ENST00000401360 MYO15BQ96JP2 1530 aa11.95□□□□□ -0.5
MIR541-201ENST00000401360 SHROOM4Q9ULL8 1493 aa11.94□□□□□ -0.5
MIR541-201ENST00000401360 NACADO15069 1562 aa11.75□□□□□ -0.53
MIR541-201ENST00000401360 SUPT5HO00267 1087 aaKnown RBP11.71□□□□□ -0.53
MIR541-201ENST00000401360 ABCC9O60706 1549 aa11.6□□□□□ -0.55
MIR541-201ENST00000401360 RB1CC1Q8TDY2 1594 aa11.58□□□□□ -0.55
MIR541-201ENST00000401360 SCRIBQ14160 1630 aa11.53□□□□□ -0.56
MIR541-201ENST00000401360 RSF1Q96T23 1441 aaPredicted RBP11.37□□□□□ -0.59
MIR541-201ENST00000401360 CHIC1Q5VXU3 224 aa11.35□□□□□ -0.59
MIR541-201ENST00000401360 BAZ1AQ9NRL2 1556 aaPredicted RBP11.3□□□□□ -0.6
MIR541-201ENST00000401360 MROH2BQ7Z745 1585 aa11.19□□□□□ -0.62
MIR541-201ENST00000401360 UNC13AQ9UPW8 1703 aa11.18□□□□□ -0.62
MIR541-201ENST00000401360 CECR2Q9BXF3 1484 aa11.18□□□□□ -0.62
MIR541-201ENST00000401360 SMARCA4P51532 1647 aa11.13□□□□□ -0.63
MIR541-201ENST00000401360 TRIM41Q8WV44 630 aa11.11□□□□□ -0.63
MIR541-201ENST00000401360 WIZO95785 1651 aa11.1□□□□□ -0.63
MIR541-201ENST00000401360 TOP2AP11388 1531 aaKnown RBP11.09□□□□□ -0.63
MIR541-201ENST00000401360 BICRAQ9NZM4 1560 aa11.05□□□□□ -0.64
MIR541-201ENST00000401360 PEG3Q9GZU2 1588 aa11.03□□□□□ -0.64
MIR541-201ENST00000401360 SMARCA2P51531 1590 aa10.99□□□□□ -0.65
MIR541-201ENST00000401360 PABPN1Q86U42 306 aaKnown RBP eCLIP10.97□□□□□ -0.65
MIR541-201ENST00000401360 CCDC88BA6NC98 1476 aa10.93□□□□□ -0.66
MIR541-201ENST00000401360 BAZ1BQ9UIG0 1483 aaKnown RBP10.9□□□□□ -0.66
MIR541-201ENST00000401360 ATAD2BQ9ULI0 1458 aa10.89□□□□□ -0.67
MIR541-201ENST00000401360 EEA1Q15075 1411 aa10.88□□□□□ -0.67
MIR541-201ENST00000401360 EIF4G1Q04637 1599 aaKnown RBP10.87□□□□□ -0.67
MIR541-201ENST00000401360 LOC105371045A0A1W2PR82 267 aa10.85□□□□□ -0.67
MIR541-201ENST00000401360 HMGXB3Q12766 1538 aa10.83□□□□□ -0.68
MIR541-201ENST00000401360 NCAPD3P42695 1498 aa10.81□□□□□ -0.68
MIR541-201ENST00000401360 TRIM26Q12899 539 aaPredicted RBP10.78□□□□□ -0.68
MIR541-201ENST00000401360 WRNQ14191 1432 aaPredicted RBP eCLIP10.76□□□□□ -0.69
MIR541-201ENST00000401360 FAM9AQ8IZU1 332 aaPredicted RBP10.76□□□□□ -0.69
MIR541-201ENST00000401360 PCGF6Q9BYE7 350 aa10.72□□□□□ -0.69
MIR541-201ENST00000401360 ABCC8Q09428 1581 aa10.71□□□□□ -0.69
MIR541-201ENST00000401360 CSRNP3Q8WYN3 585 aa10.7□□□□□ -0.7
MIR541-201ENST00000401360 HRCP23327 699 aa10.67□□□□□ -0.7
MIR541-201ENST00000401360 TNIKQ9UKE5 1360 aa10.66□□□□□ -0.7
MIR541-201ENST00000401360 GOLGA3Q08378 1498 aa10.64□□□□□ -0.71
MIR541-201ENST00000401360 ZEB1P37275 1124 aaPredicted RBP10.64□□□□□ -0.71
MIR541-201ENST00000401360 CEP164Q9UPV0 1460 aa10.63□□□□□ -0.71
MIR541-201ENST00000401360 TOP2BQ02880 1626 aa10.62□□□□□ -0.71
MIR541-201ENST00000401360 CFTRP13569 1480 aa10.61□□□□□ -0.71
MIR541-201ENST00000401360 KIF21BO75037 1637 aa10.6□□□□□ -0.71
MIR541-201ENST00000401360 BIVM-ERCC5R4GMW8 1640 aa10.6□□□□□ -0.71
MIR541-201ENST00000401360 UBTFP17480 764 aaKnown RBP10.6□□□□□ -0.71
MIR541-201ENST00000401360 PRDM2Q13029 1718 aa10.6□□□□□ -0.71
MIR541-201ENST00000401360 SOGA1O94964 1423 aa10.59□□□□□ -0.71
MIR541-201ENST00000401360 SYNJ1O43426 1573 aa10.59□□□□□ -0.71
MIR541-201ENST00000401360 CEP162Q5TB80 1403 aa10.56□□□□□ -0.72
MIR541-201ENST00000401360 CADPSQ9ULU8 1353 aa10.55□□□□□ -0.72
MIR541-201ENST00000401360 KIF27Q86VH2 1401 aa10.53□□□□□ -0.72
MIR541-201ENST00000401360 CC2D2AQ9P2K1 1620 aa10.53□□□□□ -0.72
MIR541-201ENST00000401360 ERICH3Q5RHP9 1530 aa10.52□□□□□ -0.73
MIR541-201ENST00000401360 EHMT2Q96KQ7 1210 aa10.51□□□□□ -0.73
MIR541-201ENST00000401360 APLP2Q06481 763 aa10.5□□□□□ -0.73
MIR541-201ENST00000401360 RUSC2Q8N2Y8 1516 aa10.47□□□□□ -0.73
MIR541-201ENST00000401360 CLIP1P30622 1438 aa10.46□□□□□ -0.74
MIR541-201ENST00000401360 CUX1P39880 1505 aa10.46□□□□□ -0.74
MIR541-201ENST00000401360 PRXQ9BXM0 1461 aa10.43□□□□□ -0.74
MIR541-201ENST00000401360 LAMC3Q9Y6N6 1575 aa10.43□□□□□ -0.74
MIR541-201ENST00000401360 VPS8Q8N3P4 1428 aa10.41□□□□□ -0.74
MIR541-201ENST00000401360 FANCD2Q9BXW9 1451 aa10.4□□□□□ -0.74
MIR541-201ENST00000401360 RAPGEF2Q9Y4G8 1499 aa10.4□□□□□ -0.74
MIR541-201ENST00000401360 PDS5BQ9NTI5 1447 aa10.38□□□□□ -0.75
MIR541-201ENST00000401360 DNMBPQ6XZF7 1577 aa10.37□□□□□ -0.75
MIR541-201ENST00000401360 CUX2O14529 1486 aa10.35□□□□□ -0.75
MIR541-201ENST00000401360 FGD5Q6ZNL6 1462 aa10.35□□□□□ -0.75
MIR541-201ENST00000401360 IGF1RP08069 1367 aa10.31□□□□□ -0.76
MIR541-201ENST00000401360 CARMIL1Q5VZK9 1371 aa10.31□□□□□ -0.76
MIR541-201ENST00000401360 ABCA10Q8WWZ4 1543 aa10.31□□□□□ -0.76
MIR541-201ENST00000401360 TOPBP1Q92547 1522 aa10.3□□□□□ -0.76
MIR541-201ENST00000401360 CCER1Q8TC90 406 aaPredicted RBP10.3□□□□□ -0.76
MIR541-201ENST00000401360 CUL7Q14999 1698 aa10.29□□□□□ -0.76
MIR541-201ENST00000401360 FHAD1B1AJZ9 1412 aa10.27□□□□□ -0.77
MIR541-201ENST00000401360 PPARGC1BQ86YN6 1023 aaKnown RBP10.26□□□□□ -0.77
MIR541-201ENST00000401360 MAP3K1Q13233 1512 aa10.26□□□□□ -0.77
MIR541-201ENST00000401360 POLA1P09884 1462 aaPredicted RBP10.25□□□□□ -0.77
MIR541-201ENST00000401360 EFCAB5A4FU69 1503 aa10.23□□□□□ -0.77
MIR541-201ENST00000401360 ARAP1Q96P48 1450 aa10.21□□□□□ -0.78
MIR541-201ENST00000401360 NESP48681 1621 aa10.21□□□□□ -0.78
MIR541-201ENST00000401360 RANGAP1P46060 587 aaPredicted RBP10.2□□□□□ -0.78
MIR541-201ENST00000401360 CLSPNQ9HAW4 1339 aa10.2□□□□□ -0.78
MIR541-201ENST00000401360 ARHGAP35Q9NRY4 1499 aa10.19□□□□□ -0.78
MIR541-201ENST00000401360 WDR97A6NE52 1622 aa10.18□□□□□ -0.78
MIR541-201ENST00000401360 URB2Q14146 1524 aaKnown RBP10.18□□□□□ -0.78
MIR541-201ENST00000401360 GAPVD1Q14C86 1478 aa10.17□□□□□ -0.78
MIR541-201ENST00000401360 FMN1Q68DA7 1419 aa10.16□□□□□ -0.78
MIR541-201ENST00000401360 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.16□□□□□ -0.78
MIR541-201ENST00000401360 AQRO60306 1485 aaKnown RBP eCLIP10.16□□□□□ -0.78
MIR541-201ENST00000401360 MRC2Q9UBG0 1479 aa10.16□□□□□ -0.78
MIR541-201ENST00000401360 RAD54L2Q9Y4B4 1467 aa10.16□□□□□ -0.78
MIR541-201ENST00000401360 CTTNBP2Q8WZ74 1663 aa10.15□□□□□ -0.78
MIR541-201ENST00000401360 TTBK1Q5TCY1 1321 aaPredicted RBP10.15□□□□□ -0.78
MIR541-201ENST00000401360 ABCA5Q8WWZ7 1642 aa10.15□□□□□ -0.79
MIR541-201ENST00000401360 KIF21AQ7Z4S6 1674 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms