RNA–Protein interactions for RNA: ENST00000400880.3

CCRL2-203, Transcript of C-C motif chemokine receptor like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCRL2, Length 1,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2-203ENST00000400880 AEBP2Q6ZN18 517 aaPredicted RBP27.89■■■□□ 2.06
CCRL2-203ENST00000400880 CHIC1Q5VXU3 224 aa27.04■■□□□ 1.92
CCRL2-203ENST00000400880 NISCHQ9Y2I1 1504 aa25.78■■□□□ 1.72
CCRL2-203ENST00000400880 PHF23Q9BUL5 403 aaPredicted RBP23.87■■□□□ 1.41
CCRL2-203ENST00000400880 SENP3Q9H4L4 574 aaPredicted RBP23.47■■□□□ 1.35
CCRL2-203ENST00000400880 CCDC180Q9P1Z9 1646 aa22.92■■□□□ 1.26
CCRL2-203ENST00000400880 ABCC9O60706 1549 aa22.16■■□□□ 1.14
CCRL2-203ENST00000400880 FOXD1Q16676 465 aa21.92■■□□□ 1.1
CCRL2-203ENST00000400880 PLPPR3Q6T4P5 718 aa21.82■■□□□ 1.08
CCRL2-203ENST00000400880 ZCCHC6Q5VYS8 1495 aaKnown RBP21.52■■□□□ 1.04
CCRL2-203ENST00000400880 NACADO15069 1562 aa21.45■■□□□ 1.02
CCRL2-203ENST00000400880 RB1CC1Q8TDY2 1594 aa21.43■■□□□ 1.02
CCRL2-203ENST00000400880 MYO15BQ96JP2 1530 aa21.39■■□□□ 1.02
CCRL2-203ENST00000400880 DCAF1Q9Y4B6 1507 aa21.36■■□□□ 1.01
CCRL2-203ENST00000400880 DCAF8L2P0C7V8 631 aa21.29■■□□□ 1
CCRL2-203ENST00000400880 PPP6R1Q9UPN7 881 aa21.08■□□□□ 0.97
CCRL2-203ENST00000400880 UNC13AQ9UPW8 1703 aa21.06■□□□□ 0.96
CCRL2-203ENST00000400880 ADRA2BP18089 450 aa20.99■□□□□ 0.95
CCRL2-203ENST00000400880 SCRIBQ14160 1630 aa20.86■□□□□ 0.93
CCRL2-203ENST00000400880 BICRAQ9NZM4 1560 aa20.82■□□□□ 0.92
CCRL2-203ENST00000400880 PABPN1Q86U42 306 aaKnown RBP eCLIP20.68■□□□□ 0.9
CCRL2-203ENST00000400880 SHROOM4Q9ULL8 1493 aa20.6■□□□□ 0.89
CCRL2-203ENST00000400880 PIAS4Q8N2W9 510 aaPredicted RBP20.56■□□□□ 0.88
CCRL2-203ENST00000400880 EIF4G1Q04637 1599 aaKnown RBP20.23■□□□□ 0.83
CCRL2-203ENST00000400880 DNAJC5BQ9UF47 199 aa20.18■□□□□ 0.82
CCRL2-203ENST00000400880 CC2D2AQ9P2K1 1620 aa20.11■□□□□ 0.81
CCRL2-203ENST00000400880 MSH5O43196 834 aa20.1■□□□□ 0.81
CCRL2-203ENST00000400880 CECR2Q9BXF3 1484 aa20.05■□□□□ 0.8
CCRL2-203ENST00000400880 SMARCA4P51532 1647 aa20■□□□□ 0.79
CCRL2-203ENST00000400880 BAZ1AQ9NRL2 1556 aaPredicted RBP19.97■□□□□ 0.79
CCRL2-203ENST00000400880 MROH2BQ7Z745 1585 aa19.87■□□□□ 0.77
CCRL2-203ENST00000400880 PEG3Q9GZU2 1588 aa19.82■□□□□ 0.76
CCRL2-203ENST00000400880 ATAD2BQ9ULI0 1458 aa19.8■□□□□ 0.76
CCRL2-203ENST00000400880 SMARCA2P51531 1590 aa19.79■□□□□ 0.76
CCRL2-203ENST00000400880 NCAPD3P42695 1498 aa19.77■□□□□ 0.76
CCRL2-203ENST00000400880 HMGXB3Q12766 1538 aa19.73■□□□□ 0.75
CCRL2-203ENST00000400880 WIZO95785 1651 aa19.68■□□□□ 0.74
CCRL2-203ENST00000400880 RSF1Q96T23 1441 aaPredicted RBP19.67■□□□□ 0.74
CCRL2-203ENST00000400880 BAZ1BQ9UIG0 1483 aaKnown RBP19.64■□□□□ 0.73
CCRL2-203ENST00000400880 TOP2AP11388 1531 aaKnown RBP19.48■□□□□ 0.71
CCRL2-203ENST00000400880 PPP4R3CPQ6ZMV5 832 aa19.26■□□□□ 0.67
CCRL2-203ENST00000400880 NESP48681 1621 aa19.25■□□□□ 0.67
CCRL2-203ENST00000400880 LAMC3Q9Y6N6 1575 aa19.25■□□□□ 0.67
CCRL2-203ENST00000400880 CCDC88BA6NC98 1476 aa19.21■□□□□ 0.67
CCRL2-203ENST00000400880 SUPT5HO00267 1087 aaKnown RBP19.18■□□□□ 0.66
CCRL2-203ENST00000400880 CADPSQ9ULU8 1353 aa19.17■□□□□ 0.66
CCRL2-203ENST00000400880 CFTRP13569 1480 aa19.12■□□□□ 0.65
CCRL2-203ENST00000400880 PRDM2Q13029 1718 aa19.11■□□□□ 0.65
CCRL2-203ENST00000400880 MAPK8IP2Q13387 824 aaPredicted RBP19.1■□□□□ 0.65
CCRL2-203ENST00000400880 KIF21AQ7Z4S6 1674 aa19.09■□□□□ 0.65
CCRL2-203ENST00000400880 ERCC6Q03468 1493 aa19.07■□□□□ 0.64
CCRL2-203ENST00000400880 PDS5BQ9NTI5 1447 aa19.05■□□□□ 0.64
CCRL2-203ENST00000400880 THOC2Q8NI27 1593 aaKnown RBP18.99■□□□□ 0.63
CCRL2-203ENST00000400880 FANCD2Q9BXW9 1451 aa18.97■□□□□ 0.63
CCRL2-203ENST00000400880 SCAF1Q9H7N4 1312 aaKnown RBP18.97■□□□□ 0.63
CCRL2-203ENST00000400880 CEP164Q9UPV0 1460 aa18.93■□□□□ 0.62
CCRL2-203ENST00000400880 MRC2Q9UBG0 1479 aa18.89■□□□□ 0.61
CCRL2-203ENST00000400880 CUX2O14529 1486 aa18.86■□□□□ 0.61
CCRL2-203ENST00000400880 WDR62O43379 1518 aa18.85■□□□□ 0.61
CCRL2-203ENST00000400880 KCNA4P22459 653 aa18.8■□□□□ 0.6
CCRL2-203ENST00000400880 URB2Q14146 1524 aaKnown RBP18.79■□□□□ 0.6
CCRL2-203ENST00000400880 DMRT2Q9Y5R5 561 aa18.79■□□□□ 0.6
CCRL2-203ENST00000400880 DNMBPQ6XZF7 1577 aa18.72■□□□□ 0.59
CCRL2-203ENST00000400880 TOPBP1Q92547 1522 aa18.71■□□□□ 0.59
CCRL2-203ENST00000400880 CNKSR2Q8WXI2 1034 aa18.7■□□□□ 0.58
CCRL2-203ENST00000400880 ABCC8Q09428 1581 aa18.68■□□□□ 0.58
CCRL2-203ENST00000400880 CUX1P39880 1505 aa18.63■□□□□ 0.57
CCRL2-203ENST00000400880 NCBP3Q53F19 620 aaKnown RBP18.58■□□□□ 0.56
CCRL2-203ENST00000400880 POTEDQ86YR6 584 aa18.57■□□□□ 0.56
CCRL2-203ENST00000400880 POLA1P09884 1462 aaPredicted RBP18.56■□□□□ 0.56
CCRL2-203ENST00000400880 BIVM-ERCC5R4GMW8 1640 aa18.56■□□□□ 0.56
CCRL2-203ENST00000400880 SYNJ1O43426 1573 aa18.54■□□□□ 0.56
CCRL2-203ENST00000400880 IFT140Q96RY7 1462 aa18.53■□□□□ 0.56
CCRL2-203ENST00000400880 TOP2BQ02880 1626 aa18.53■□□□□ 0.56
CCRL2-203ENST00000400880 TARBP1Q13395 1621 aaKnown RBP18.53■□□□□ 0.56
CCRL2-203ENST00000400880 WRNQ14191 1432 aaPredicted RBP eCLIP18.53■□□□□ 0.56
CCRL2-203ENST00000400880 FGD5Q6ZNL6 1462 aa18.52■□□□□ 0.56
CCRL2-203ENST00000400880 NPM3O75607 178 aaKnown RBP18.52■□□□□ 0.56
CCRL2-203ENST00000400880 WDR97A6NE52 1622 aa18.46■□□□□ 0.55
CCRL2-203ENST00000400880 RAD54L2Q9Y4B4 1467 aa18.45■□□□□ 0.54
CCRL2-203ENST00000400880 ZNF608Q9ULD9 1512 aaPredicted RBP18.44■□□□□ 0.54
CCRL2-203ENST00000400880 SOGA1O94964 1423 aa18.43■□□□□ 0.54
CCRL2-203ENST00000400880 EIF4G3O43432 1585 aaKnown RBP18.42■□□□□ 0.54
CCRL2-203ENST00000400880 HOXD11P31277 338 aaPredicted RBP18.39■□□□□ 0.53
CCRL2-203ENST00000400880 RNF216Q9NWF9 866 aaPredicted RBP18.38■□□□□ 0.53
CCRL2-203ENST00000400880 ABCA10Q8WWZ4 1543 aa18.37■□□□□ 0.53
CCRL2-203ENST00000400880 ABCA5Q8WWZ7 1642 aa18.33■□□□□ 0.52
CCRL2-203ENST00000400880 AQRO60306 1485 aaKnown RBP eCLIP18.33■□□□□ 0.52
CCRL2-203ENST00000400880 TDRD9Q8NDG6 1382 aaKnown RBP18.3■□□□□ 0.52
CCRL2-203ENST00000400880 PBRM1Q86U86 1689 aa18.29■□□□□ 0.52
CCRL2-203ENST00000400880 GAPVD1Q14C86 1478 aa18.24■□□□□ 0.51
CCRL2-203ENST00000400880 GRIN2BQ13224 1484 aa18.22■□□□□ 0.51
CCRL2-203ENST00000400880 CHD1O14646 1710 aa18.19■□□□□ 0.5
CCRL2-203ENST00000400880 SNAPC4Q5SXM2 1469 aa18.19■□□□□ 0.5
CCRL2-203ENST00000400880 MAGI1Q96QZ7 1491 aaPredicted RBP18.18■□□□□ 0.5
CCRL2-203ENST00000400880 ERICH3Q5RHP9 1530 aa18.15■□□□□ 0.5
CCRL2-203ENST00000400880 ADAMTS12P58397 1594 aa18.13■□□□□ 0.49
CCRL2-203ENST00000400880 TRIM41Q8WV44 630 aa18.11■□□□□ 0.49
CCRL2-203ENST00000400880 KIF27Q86VH2 1401 aa18.11■□□□□ 0.49
CCRL2-203ENST00000400880 SYNJ2O15056 1496 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms