RNA–Protein interactions for RNA: ENST00000400777.7

CASP9-204, Transcript of caspase 9, humanhuman

TSL 1 (best)

Gene CASP9, Length 1,878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-204ENST00000400777 NISCHQ9Y2I1 1504 aa37.37■■■■□ 3.57
CASP9-204ENST00000400777 CCDC180Q9P1Z9 1646 aa32.75■■■□□ 2.83
CASP9-204ENST00000400777 ABCC9O60706 1549 aa31.38■■■□□ 2.61
CASP9-204ENST00000400777 ZCCHC6Q5VYS8 1495 aaKnown RBP31.31■■■□□ 2.6
CASP9-204ENST00000400777 DCAF8L2P0C7V8 631 aa31.05■■■□□ 2.56
CASP9-204ENST00000400777 DCAF1Q9Y4B6 1507 aa30.91■■■□□ 2.54
CASP9-204ENST00000400777 MYO15BQ96JP2 1530 aa30.71■■■□□ 2.51
CASP9-204ENST00000400777 NACADO15069 1562 aa30.63■■■□□ 2.49
CASP9-204ENST00000400777 RB1CC1Q8TDY2 1594 aa30.47■■■□□ 2.47
CASP9-204ENST00000400777 SHROOM4Q9ULL8 1493 aa30.2■■■□□ 2.42
CASP9-204ENST00000400777 SCRIBQ14160 1630 aa30.06■■■□□ 2.4
CASP9-204ENST00000400777 UNC13AQ9UPW8 1703 aa29.74■■■□□ 2.35
CASP9-204ENST00000400777 PABPN1Q86U42 306 aaKnown RBP eCLIP29.53■■■□□ 2.32
CASP9-204ENST00000400777 BICRAQ9NZM4 1560 aa29.52■■■□□ 2.32
CASP9-204ENST00000400777 CECR2Q9BXF3 1484 aa29.06■■■□□ 2.24
CASP9-204ENST00000400777 BAZ1AQ9NRL2 1556 aaPredicted RBP28.9■■■□□ 2.22
CASP9-204ENST00000400777 SUPT5HO00267 1087 aaKnown RBP28.87■■■□□ 2.21
CASP9-204ENST00000400777 MROH2BQ7Z745 1585 aa28.84■■■□□ 2.21
CASP9-204ENST00000400777 RSF1Q96T23 1441 aaPredicted RBP28.83■■■□□ 2.21
CASP9-204ENST00000400777 SMARCA4P51532 1647 aa28.8■■■□□ 2.2
CASP9-204ENST00000400777 EIF4G1Q04637 1599 aaKnown RBP28.7■■■□□ 2.19
CASP9-204ENST00000400777 WIZO95785 1651 aa28.56■■■□□ 2.16
CASP9-204ENST00000400777 PEG3Q9GZU2 1588 aa28.48■■■□□ 2.15
CASP9-204ENST00000400777 ATAD2BQ9ULI0 1458 aa28.46■■■□□ 2.15
CASP9-204ENST00000400777 SMARCA2P51531 1590 aa28.43■■■□□ 2.14
CASP9-204ENST00000400777 CC2D2AQ9P2K1 1620 aa28.36■■■□□ 2.13
CASP9-204ENST00000400777 NCAPD3P42695 1498 aa28.29■■■□□ 2.12
CASP9-204ENST00000400777 TOP2AP11388 1531 aaKnown RBP28.28■■■□□ 2.12
CASP9-204ENST00000400777 BAZ1BQ9UIG0 1483 aaKnown RBP28.28■■■□□ 2.12
CASP9-204ENST00000400777 HMGXB3Q12766 1538 aa28.2■■■□□ 2.11
CASP9-204ENST00000400777 DNAJC5BQ9UF47 199 aa28.04■■■□□ 2.08
CASP9-204ENST00000400777 CCDC88BA6NC98 1476 aa27.99■■■□□ 2.07
CASP9-204ENST00000400777 CFTRP13569 1480 aa27.55■■■□□ 2
CASP9-204ENST00000400777 CADPSQ9ULU8 1353 aa27.55■■■□□ 2
CASP9-204ENST00000400777 NESP48681 1621 aa27.4■■□□□ 1.98
CASP9-204ENST00000400777 CHIC1Q5VXU3 224 aa27.39■■□□□ 1.98
CASP9-204ENST00000400777 LAMC3Q9Y6N6 1575 aa27.39■■□□□ 1.97
CASP9-204ENST00000400777 PRDM2Q13029 1718 aa27.28■■□□□ 1.96
CASP9-204ENST00000400777 ABCC8Q09428 1581 aa27.25■■□□□ 1.95
CASP9-204ENST00000400777 FANCD2Q9BXW9 1451 aa27.23■■□□□ 1.95
CASP9-204ENST00000400777 PDS5BQ9NTI5 1447 aa27.23■■□□□ 1.95
CASP9-204ENST00000400777 TRIM41Q8WV44 630 aa27.19■■□□□ 1.94
CASP9-204ENST00000400777 WRNQ14191 1432 aaPredicted RBP eCLIP27.17■■□□□ 1.94
CASP9-204ENST00000400777 CEP164Q9UPV0 1460 aa27.1■■□□□ 1.93
CASP9-204ENST00000400777 SYNJ1O43426 1573 aa27.03■■□□□ 1.92
CASP9-204ENST00000400777 KIF21AQ7Z4S6 1674 aa27.02■■□□□ 1.92
CASP9-204ENST00000400777 CUX1P39880 1505 aa26.99■■□□□ 1.91
CASP9-204ENST00000400777 ERCC6Q03468 1493 aa26.98■■□□□ 1.91
CASP9-204ENST00000400777 TOP2BQ02880 1626 aa26.97■■□□□ 1.91
CASP9-204ENST00000400777 BIVM-ERCC5R4GMW8 1640 aa26.92■■□□□ 1.9
CASP9-204ENST00000400777 URB2Q14146 1524 aaKnown RBP26.89■■□□□ 1.89
CASP9-204ENST00000400777 DNMBPQ6XZF7 1577 aa26.89■■□□□ 1.89
CASP9-204ENST00000400777 TOPBP1Q92547 1522 aa26.87■■□□□ 1.89
CASP9-204ENST00000400777 MRC2Q9UBG0 1479 aa26.87■■□□□ 1.89
CASP9-204ENST00000400777 FGD5Q6ZNL6 1462 aa26.78■■□□□ 1.88
CASP9-204ENST00000400777 WDR62O43379 1518 aa26.73■■□□□ 1.87
CASP9-204ENST00000400777 POLA1P09884 1462 aaPredicted RBP26.72■■□□□ 1.87
CASP9-204ENST00000400777 THOC2Q8NI27 1593 aaKnown RBP26.72■■□□□ 1.87
CASP9-204ENST00000400777 SOGA1O94964 1423 aa26.68■■□□□ 1.86
CASP9-204ENST00000400777 FAM9AQ8IZU1 332 aaPredicted RBP26.66■■□□□ 1.86
CASP9-204ENST00000400777 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
CASP9-204ENST00000400777 RUSC2Q8N2Y8 1516 aa26.58■■□□□ 1.85
CASP9-204ENST00000400777 EEA1Q15075 1411 aa26.56■■□□□ 1.84
CASP9-204ENST00000400777 CUX2O14529 1486 aa26.55■■□□□ 1.84
CASP9-204ENST00000400777 ABCA10Q8WWZ4 1543 aa26.54■■□□□ 1.84
CASP9-204ENST00000400777 KIF27Q86VH2 1401 aa26.53■■□□□ 1.84
CASP9-204ENST00000400777 IFT140Q96RY7 1462 aa26.49■■□□□ 1.83
CASP9-204ENST00000400777 TARBP1Q13395 1621 aaKnown RBP26.48■■□□□ 1.83
CASP9-204ENST00000400777 CSRNP3Q8WYN3 585 aa26.47■■□□□ 1.83
CASP9-204ENST00000400777 WDR97A6NE52 1622 aa26.43■■□□□ 1.82
CASP9-204ENST00000400777 TDRD9Q8NDG6 1382 aaKnown RBP26.42■■□□□ 1.82
CASP9-204ENST00000400777 GAPVD1Q14C86 1478 aa26.34■■□□□ 1.81
CASP9-204ENST00000400777 ZNF608Q9ULD9 1512 aaPredicted RBP26.33■■□□□ 1.81
CASP9-204ENST00000400777 IGF1RP08069 1367 aa26.33■■□□□ 1.8
CASP9-204ENST00000400777 ABCA5Q8WWZ7 1642 aa26.32■■□□□ 1.8
CASP9-204ENST00000400777 LOC105371045A0A1W2PR82 267 aa26.32■■□□□ 1.8
CASP9-204ENST00000400777 AQRO60306 1485 aaKnown RBP eCLIP26.32■■□□□ 1.83e-6■■■□□ 17.3
CASP9-204ENST00000400777 EHMT2Q96KQ7 1210 aa26.3■■□□□ 1.8
CASP9-204ENST00000400777 ERICH3Q5RHP9 1530 aa26.23■■□□□ 1.79
CASP9-204ENST00000400777 EIF4G3O43432 1585 aaKnown RBP26.22■■□□□ 1.79
CASP9-204ENST00000400777 PRXQ9BXM0 1461 aa26.22■■□□□ 1.79
CASP9-204ENST00000400777 GRIN2BQ13224 1484 aa26.2■■□□□ 1.78
CASP9-204ENST00000400777 KIF21BO75037 1637 aa26.2■■□□□ 1.78
CASP9-204ENST00000400777 CARMIL1Q5VZK9 1371 aa26.19■■□□□ 1.78
CASP9-204ENST00000400777 GOLGA3Q08378 1498 aa26.17■■□□□ 1.78
CASP9-204ENST00000400777 RAPGEF2Q9Y4G8 1499 aa26.16■■□□□ 1.78
CASP9-204ENST00000400777 PBRM1Q86U86 1689 aa26.15■■□□□ 1.78
CASP9-204ENST00000400777 CUL7Q14999 1698 aa26.13■■□□□ 1.77
CASP9-204ENST00000400777 UBTFP17480 764 aaKnown RBP26.11■■□□□ 1.77
CASP9-204ENST00000400777 SNAPC4Q5SXM2 1469 aa26.06■■□□□ 1.76
CASP9-204ENST00000400777 FHAD1B1AJZ9 1412 aa26.05■■□□□ 1.76
CASP9-204ENST00000400777 MAGI1Q96QZ7 1491 aaPredicted RBP26.02■■□□□ 1.76
CASP9-204ENST00000400777 ADAMTS12P58397 1594 aa26.02■■□□□ 1.76
CASP9-204ENST00000400777 TNIKQ9UKE5 1360 aa26■■□□□ 1.75
CASP9-204ENST00000400777 SYNJ2O15056 1496 aa25.93■■□□□ 1.74
CASP9-204ENST00000400777 CHMP7Q8WUX9 453 aaPredicted RBP25.92■■□□□ 1.74
CASP9-204ENST00000400777 FBLN2P98095 1184 aa25.9■■□□□ 1.74
CASP9-204ENST00000400777 GRIN2AQ12879 1464 aa25.87■■□□□ 1.73
CASP9-204ENST00000400777 CEP162Q5TB80 1403 aa25.83■■□□□ 1.73
CASP9-204ENST00000400777 RANGAP1P46060 587 aaPredicted RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms