RNA–Protein interactions for RNA: ENST00000400761.7

PDGFA-202, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-202ENST00000400761 NISCHQ9Y2I1 1504 aa43.62■■■■■ 4.57
PDGFA-202ENST00000400761 ABCC9O60706 1549 aa40.27■■■■■ 4.04
PDGFA-202ENST00000400761 CCDC180Q9P1Z9 1646 aa39.51■■■■□ 3.91
PDGFA-202ENST00000400761 DNAJC5BQ9UF47 199 aa38.52■■■■□ 3.76
PDGFA-202ENST00000400761 RB1CC1Q8TDY2 1594 aa37.99■■■■□ 3.67
PDGFA-202ENST00000400761 NACADO15069 1562 aa37.54■■■■□ 3.6
PDGFA-202ENST00000400761 PABPN1Q86U42 306 aaKnown RBP eCLIP37.36■■■■□ 3.57
PDGFA-202ENST00000400761 UNC13AQ9UPW8 1703 aa37.16■■■■□ 3.54
PDGFA-202ENST00000400761 DCAF8L2P0C7V8 631 aa37.11■■■■□ 3.53
PDGFA-202ENST00000400761 BICRAQ9NZM4 1560 aa36.94■■■■□ 3.5
PDGFA-202ENST00000400761 MYO15BQ96JP2 1530 aa36.77■■■■□ 3.48
PDGFA-202ENST00000400761 CECR2Q9BXF3 1484 aa36.37■■■■□ 3.41
PDGFA-202ENST00000400761 CC2D2AQ9P2K1 1620 aa36.35■■■■□ 3.41
PDGFA-202ENST00000400761 SHROOM4Q9ULL8 1493 aa36.35■■■■□ 3.41
PDGFA-202ENST00000400761 EIF4G1Q04637 1599 aaKnown RBP36.08■■■■□ 3.37
PDGFA-202ENST00000400761 DCAF1Q9Y4B6 1507 aa36■■■■□ 3.35
PDGFA-202ENST00000400761 ZCCHC6Q5VYS8 1495 aaKnown RBP35.98■■■■□ 3.35
PDGFA-202ENST00000400761 DNAJC5Q9H3Z4 198 aa35.97■■■■□ 3.35
PDGFA-202ENST00000400761 SCRIBQ14160 1630 aa35.92■■■■□ 3.34
PDGFA-202ENST00000400761 CUX2O14529 1486 aa35.07■■■■□ 3.2
PDGFA-202ENST00000400761 ERCC6Q03468 1493 aa34.83■■■■□ 3.17
PDGFA-202ENST00000400761 NCAPD3P42695 1498 aa34.67■■■■□ 3.14
PDGFA-202ENST00000400761 ATAD2BQ9ULI0 1458 aa34.44■■■■□ 3.1
PDGFA-202ENST00000400761 NESP48681 1621 aa34.37■■■■□ 3.09
PDGFA-202ENST00000400761 HMGXB3Q12766 1538 aa34.34■■■■□ 3.09
PDGFA-202ENST00000400761 SMARCA2P51531 1590 aa34.3■■■■□ 3.08
PDGFA-202ENST00000400761 THOC2Q8NI27 1593 aaKnown RBP34.21■■■■□ 3.07
PDGFA-202ENST00000400761 SMARCA4P51532 1647 aa34.2■■■■□ 3.07
PDGFA-202ENST00000400761 BAZ1BQ9UIG0 1483 aaKnown RBP34.05■■■■□ 3.04
PDGFA-202ENST00000400761 TRIM41Q8WV44 630 aa34.01■■■■□ 3.03
PDGFA-202ENST00000400761 LAMC3Q9Y6N6 1575 aa34.01■■■■□ 3.03
PDGFA-202ENST00000400761 KIF21AQ7Z4S6 1674 aa33.92■■■■□ 3.02
PDGFA-202ENST00000400761 BAZ1AQ9NRL2 1556 aaPredicted RBP33.9■■■■□ 3.02
PDGFA-202ENST00000400761 PEG3Q9GZU2 1588 aa33.89■■■■□ 3.02
PDGFA-202ENST00000400761 PDS5BQ9NTI5 1447 aa33.83■■■■□ 3.01
PDGFA-202ENST00000400761 MROH2BQ7Z745 1585 aa33.6■■■□□ 2.97
PDGFA-202ENST00000400761 MRC2Q9UBG0 1479 aa33.59■■■□□ 2.97
PDGFA-202ENST00000400761 CADPSQ9ULU8 1353 aa33.56■■■□□ 2.96
PDGFA-202ENST00000400761 WDR62O43379 1518 aa33.55■■■□□ 2.96
PDGFA-202ENST00000400761 OSCARQ8IYS5 282 aa33.3■■■□□ 2.92
PDGFA-202ENST00000400761 CEP164Q9UPV0 1460 aa33.29■■■□□ 2.92
PDGFA-202ENST00000400761 FANCD2Q9BXW9 1451 aa33.18■■■□□ 2.9
PDGFA-202ENST00000400761 WIZO95785 1651 aa33.16■■■□□ 2.9
PDGFA-202ENST00000400761 CFTRP13569 1480 aa33.02■■■□□ 2.88
PDGFA-202ENST00000400761 RIMBP3CA6NJZ7 1639 aa32.99■■■□□ 2.87
PDGFA-202ENST00000400761 RIMBP3BA6NNM3 1639 aa32.99■■■□□ 2.87
PDGFA-202ENST00000400761 RIMBP3Q9UFD9 1639 aa32.99■■■□□ 2.87
PDGFA-202ENST00000400761 URB2Q14146 1524 aaKnown RBP32.97■■■□□ 2.87
PDGFA-202ENST00000400761 ARHGEF11O15085 1522 aa32.8■■■□□ 2.84
PDGFA-202ENST00000400761 ZNF608Q9ULD9 1512 aaPredicted RBP32.7■■■□□ 2.83
PDGFA-202ENST00000400761 TOP2AP11388 1531 aaKnown RBP32.68■■■□□ 2.82
PDGFA-202ENST00000400761 IFT140Q96RY7 1462 aa32.67■■■□□ 2.82
PDGFA-202ENST00000400761 PRDM2Q13029 1718 aa32.64■■■□□ 2.82
PDGFA-202ENST00000400761 RSF1Q96T23 1441 aaPredicted RBP32.6■■■□□ 2.81
PDGFA-202ENST00000400761 CYB5RLQ6IPT4 315 aa32.58■■■□□ 2.81
PDGFA-202ENST00000400761 TOPBP1Q92547 1522 aa32.47■■■□□ 2.79
PDGFA-202ENST00000400761 EIF4G3O43432 1585 aaKnown RBP32.47■■■□□ 2.79
PDGFA-202ENST00000400761 TRHP20396 242 aaPredicted RBP32.46■■■□□ 2.79
PDGFA-202ENST00000400761 ARAP1Q96P48 1450 aa32.42■■■□□ 2.78
PDGFA-202ENST00000400761 CHD1O14646 1710 aa32.4■■■□□ 2.78
PDGFA-202ENST00000400761 ABCC8Q09428 1581 aa32.34■■■□□ 2.77
PDGFA-202ENST00000400761 CCDC88BA6NC98 1476 aa32.31■■■□□ 2.76
PDGFA-202ENST00000400761 AQRO60306 1485 aaKnown RBP eCLIP32.29■■■□□ 2.76
PDGFA-202ENST00000400761 DNMBPQ6XZF7 1577 aa32.28■■■□□ 2.76
PDGFA-202ENST00000400761 TARBP1Q13395 1621 aaKnown RBP32.26■■■□□ 2.76
PDGFA-202ENST00000400761 FBLN2P98095 1184 aa32.21■■■□□ 2.75
PDGFA-202ENST00000400761 AEBP2Q6ZN18 517 aaPredicted RBP32.12■■■□□ 2.73
PDGFA-202ENST00000400761 POLA1P09884 1462 aaPredicted RBP32.09■■■□□ 2.73
PDGFA-202ENST00000400761 CLASP1Q7Z460 1538 aa32.01■■■□□ 2.72
PDGFA-202ENST00000400761 RAD54L2Q9Y4B4 1467 aa31.97■■■□□ 2.71
PDGFA-202ENST00000400761 TDRD9Q8NDG6 1382 aaKnown RBP31.95■■■□□ 2.71
PDGFA-202ENST00000400761 SNAPC4Q5SXM2 1469 aa31.93■■■□□ 2.7
PDGFA-202ENST00000400761 SOGA1O94964 1423 aa31.92■■■□□ 2.7
PDGFA-202ENST00000400761 SYNJ1O43426 1573 aa31.9■■■□□ 2.7
PDGFA-202ENST00000400761 WDR97A6NE52 1622 aa31.87■■■□□ 2.69
PDGFA-202ENST00000400761 CHMP7Q8WUX9 453 aaPredicted RBP31.85■■■□□ 2.69
PDGFA-202ENST00000400761 MAGI1Q96QZ7 1491 aaPredicted RBP31.82■■■□□ 2.68
PDGFA-202ENST00000400761 FGD5Q6ZNL6 1462 aa31.76■■■□□ 2.67
PDGFA-202ENST00000400761 GRIN2BQ13224 1484 aa31.74■■■□□ 2.67
PDGFA-202ENST00000400761 SYNJ2O15056 1496 aa31.73■■■□□ 2.67
PDGFA-202ENST00000400761 GAPVD1Q14C86 1478 aa31.72■■■□□ 2.67
PDGFA-202ENST00000400761 CUX1P39880 1505 aa31.61■■■□□ 2.65
PDGFA-202ENST00000400761 PBRM1Q86U86 1689 aa31.57■■■□□ 2.64
PDGFA-202ENST00000400761 ERCC6L2Q5T890 1561 aa31.44■■■□□ 2.62
PDGFA-202ENST00000400761 ABCA5Q8WWZ7 1642 aa31.4■■■□□ 2.62
PDGFA-202ENST00000400761 ABCA10Q8WWZ4 1543 aa31.36■■■□□ 2.61
PDGFA-202ENST00000400761 GRIN2AQ12879 1464 aa31.33■■■□□ 2.61
PDGFA-202ENST00000400761 CEP170Q5SW79 1584 aa31.32■■■□□ 2.6
PDGFA-202ENST00000400761 KIF13AQ9H1H9 1805 aa31.28■■■□□ 2.6
PDGFA-202ENST00000400761 NUP160Q12769 1436 aa31.27■■■□□ 2.6
PDGFA-202ENST00000400761 SHROOM2Q13796 1616 aa31.24■■■□□ 2.59
PDGFA-202ENST00000400761 SUPT5HO00267 1087 aaKnown RBP31.22■■■□□ 2.59
PDGFA-202ENST00000400761 ADAMTS12P58397 1594 aa31.22■■■□□ 2.59
PDGFA-202ENST00000400761 FHAD1B1AJZ9 1412 aa31.08■■■□□ 2.57
PDGFA-202ENST00000400761 WRNQ14191 1432 aaPredicted RBP eCLIP31.07■■■□□ 2.56
PDGFA-202ENST00000400761 PRG4Q92954 1404 aaPredicted RBP31.01■■■□□ 2.55
PDGFA-202ENST00000400761 ABCC10Q5T3U5 1492 aa31■■■□□ 2.55
PDGFA-202ENST00000400761 FAM69CQ0P6D2 419 aa30.98■■■□□ 2.55
PDGFA-202ENST00000400761 ERICH3Q5RHP9 1530 aa30.96■■■□□ 2.55
PDGFA-202ENST00000400761 JPH4Q96JJ6 628 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms