RNA–Protein interactions for RNA: ENST00000399036.3

CCRL2-202, Transcript of C-C motif chemokine receptor like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCRL2, Length 1,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2-202ENST00000399036 NISCHQ9Y2I1 1504 aa29.94■■■□□ 2.38
CCRL2-202ENST00000399036 CCDC180Q9P1Z9 1646 aa26.49■■□□□ 1.83
CCRL2-202ENST00000399036 ABCC9O60706 1549 aa25.93■■□□□ 1.74
CCRL2-202ENST00000399036 DCAF8L2P0C7V8 631 aa25.05■■□□□ 1.6
CCRL2-202ENST00000399036 ZCCHC6Q5VYS8 1495 aaKnown RBP24.97■■□□□ 1.59
CCRL2-202ENST00000399036 RB1CC1Q8TDY2 1594 aa24.9■■□□□ 1.58
CCRL2-202ENST00000399036 NACADO15069 1562 aa24.89■■□□□ 1.57
CCRL2-202ENST00000399036 MYO15BQ96JP2 1530 aa24.75■■□□□ 1.55
CCRL2-202ENST00000399036 DCAF1Q9Y4B6 1507 aa24.71■■□□□ 1.55
CCRL2-202ENST00000399036 UNC13AQ9UPW8 1703 aa24.4■■□□□ 1.5
CCRL2-202ENST00000399036 PABPN1Q86U42 306 aaKnown RBP eCLIP24.29■■□□□ 1.48
CCRL2-202ENST00000399036 SCRIBQ14160 1630 aa24.29■■□□□ 1.48
CCRL2-202ENST00000399036 BICRAQ9NZM4 1560 aa24.22■■□□□ 1.47
CCRL2-202ENST00000399036 SHROOM4Q9ULL8 1493 aa23.83■■□□□ 1.41
CCRL2-202ENST00000399036 DNAJC5BQ9UF47 199 aa23.76■■□□□ 1.39
CCRL2-202ENST00000399036 EIF4G1Q04637 1599 aaKnown RBP23.54■■□□□ 1.36
CCRL2-202ENST00000399036 CC2D2AQ9P2K1 1620 aa23.43■■□□□ 1.34
CCRL2-202ENST00000399036 CECR2Q9BXF3 1484 aa23.38■■□□□ 1.33
CCRL2-202ENST00000399036 SMARCA4P51532 1647 aa23.2■■□□□ 1.31
CCRL2-202ENST00000399036 BAZ1AQ9NRL2 1556 aaPredicted RBP23.17■■□□□ 1.3
CCRL2-202ENST00000399036 MROH2BQ7Z745 1585 aa23.13■■□□□ 1.29
CCRL2-202ENST00000399036 ATAD2BQ9ULI0 1458 aa23.06■■□□□ 1.28
CCRL2-202ENST00000399036 NCAPD3P42695 1498 aa23■■□□□ 1.27
CCRL2-202ENST00000399036 SMARCA2P51531 1590 aa22.97■■□□□ 1.27
CCRL2-202ENST00000399036 PEG3Q9GZU2 1588 aa22.94■■□□□ 1.26
CCRL2-202ENST00000399036 RSF1Q96T23 1441 aaPredicted RBP22.89■■□□□ 1.25
CCRL2-202ENST00000399036 WIZO95785 1651 aa22.88■■□□□ 1.25
CCRL2-202ENST00000399036 HMGXB3Q12766 1538 aa22.87■■□□□ 1.25
CCRL2-202ENST00000399036 BAZ1BQ9UIG0 1483 aaKnown RBP22.86■■□□□ 1.25
CCRL2-202ENST00000399036 TOP2AP11388 1531 aaKnown RBP22.59■■□□□ 1.21
CCRL2-202ENST00000399036 NESP48681 1621 aa22.5■■□□□ 1.19
CCRL2-202ENST00000399036 SUPT5HO00267 1087 aaKnown RBP22.45■■□□□ 1.19
CCRL2-202ENST00000399036 CCDC88BA6NC98 1476 aa22.37■■□□□ 1.17
CCRL2-202ENST00000399036 CADPSQ9ULU8 1353 aa22.35■■□□□ 1.17
CCRL2-202ENST00000399036 LAMC3Q9Y6N6 1575 aa22.35■■□□□ 1.17
CCRL2-202ENST00000399036 ERCC6Q03468 1493 aa22.28■■□□□ 1.16
CCRL2-202ENST00000399036 CFTRP13569 1480 aa22.24■■□□□ 1.15
CCRL2-202ENST00000399036 PDS5BQ9NTI5 1447 aa22.2■■□□□ 1.14
CCRL2-202ENST00000399036 KIF21AQ7Z4S6 1674 aa22.19■■□□□ 1.14
CCRL2-202ENST00000399036 FANCD2Q9BXW9 1451 aa22.1■■□□□ 1.13
CCRL2-202ENST00000399036 THOC2Q8NI27 1593 aaKnown RBP22.07■■□□□ 1.12
CCRL2-202ENST00000399036 CEP164Q9UPV0 1460 aa22.04■■□□□ 1.12
CCRL2-202ENST00000399036 PRDM2Q13029 1718 aa22.03■■□□□ 1.12
CCRL2-202ENST00000399036 MRC2Q9UBG0 1479 aa21.99■■□□□ 1.11
CCRL2-202ENST00000399036 CUX2O14529 1486 aa21.96■■□□□ 1.11
CCRL2-202ENST00000399036 WDR62O43379 1518 aa21.91■■□□□ 1.1
CCRL2-202ENST00000399036 URB2Q14146 1524 aaKnown RBP21.9■■□□□ 1.1
CCRL2-202ENST00000399036 TOPBP1Q92547 1522 aa21.77■■□□□ 1.08
CCRL2-202ENST00000399036 DNMBPQ6XZF7 1577 aa21.72■■□□□ 1.07
CCRL2-202ENST00000399036 ABCC8Q09428 1581 aa21.68■■□□□ 1.06
CCRL2-202ENST00000399036 CUX1P39880 1505 aa21.67■■□□□ 1.06
CCRL2-202ENST00000399036 POLA1P09884 1462 aaPredicted RBP21.6■■□□□ 1.05
CCRL2-202ENST00000399036 FGD5Q6ZNL6 1462 aa21.57■■□□□ 1.04
CCRL2-202ENST00000399036 IFT140Q96RY7 1462 aa21.56■■□□□ 1.04
CCRL2-202ENST00000399036 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
CCRL2-202ENST00000399036 RAD54L2Q9Y4B4 1467 aa21.55■■□□□ 1.04
CCRL2-202ENST00000399036 ZNF608Q9ULD9 1512 aaPredicted RBP21.54■■□□□ 1.04
CCRL2-202ENST00000399036 SYNJ1O43426 1573 aa21.53■■□□□ 1.04
CCRL2-202ENST00000399036 TARBP1Q13395 1621 aaKnown RBP21.52■■□□□ 1.04
CCRL2-202ENST00000399036 SOGA1O94964 1423 aa21.5■■□□□ 1.03
CCRL2-202ENST00000399036 TOP2BQ02880 1626 aa21.47■■□□□ 1.03
CCRL2-202ENST00000399036 BIVM-ERCC5R4GMW8 1640 aa21.47■■□□□ 1.03
CCRL2-202ENST00000399036 AQRO60306 1485 aaKnown RBP eCLIP21.43■■□□□ 1.02
CCRL2-202ENST00000399036 EIF4G3O43432 1585 aaKnown RBP21.42■■□□□ 1.02
CCRL2-202ENST00000399036 TDRD9Q8NDG6 1382 aaKnown RBP21.41■■□□□ 1.02
CCRL2-202ENST00000399036 WDR97A6NE52 1622 aa21.36■■□□□ 1.01
CCRL2-202ENST00000399036 ABCA10Q8WWZ4 1543 aa21.33■■□□□ 1.01
CCRL2-202ENST00000399036 GAPVD1Q14C86 1478 aa21.25■□□□□ 0.99
CCRL2-202ENST00000399036 ABCA5Q8WWZ7 1642 aa21.25■□□□□ 0.99
CCRL2-202ENST00000399036 DNAJC5Q9H3Z4 198 aa21.21■□□□□ 0.99
CCRL2-202ENST00000399036 GRIN2BQ13224 1484 aa21.21■□□□□ 0.99
CCRL2-202ENST00000399036 SNAPC4Q5SXM2 1469 aa21.2■□□□□ 0.98
CCRL2-202ENST00000399036 PBRM1Q86U86 1689 aa21.19■□□□□ 0.98
CCRL2-202ENST00000399036 TRIM41Q8WV44 630 aa21.15■□□□□ 0.98
CCRL2-202ENST00000399036 FBLN2P98095 1184 aa21.14■□□□□ 0.97
CCRL2-202ENST00000399036 CHD1O14646 1710 aa21.13■□□□□ 0.97
CCRL2-202ENST00000399036 MAGI1Q96QZ7 1491 aaPredicted RBP21.12■□□□□ 0.97
CCRL2-202ENST00000399036 OSCARQ8IYS5 282 aa21.12■□□□□ 0.97
CCRL2-202ENST00000399036 CHMP7Q8WUX9 453 aaPredicted RBP21.07■□□□□ 0.96
CCRL2-202ENST00000399036 KIF27Q86VH2 1401 aa21.07■□□□□ 0.96
CCRL2-202ENST00000399036 SYNJ2O15056 1496 aa21.06■□□□□ 0.96
CCRL2-202ENST00000399036 ERICH3Q5RHP9 1530 aa21.06■□□□□ 0.96
CCRL2-202ENST00000399036 ADAMTS12P58397 1594 aa21.04■□□□□ 0.96
CCRL2-202ENST00000399036 RUSC2Q8N2Y8 1516 aa21.03■□□□□ 0.96
CCRL2-202ENST00000399036 IGF1RP08069 1367 aa21.01■□□□□ 0.95
CCRL2-202ENST00000399036 CHIC1Q5VXU3 224 aa21■□□□□ 0.95
CCRL2-202ENST00000399036 FHAD1B1AJZ9 1412 aa20.99■□□□□ 0.95
CCRL2-202ENST00000399036 GRIN2AQ12879 1464 aa20.96■□□□□ 0.95
CCRL2-202ENST00000399036 CLASP1Q7Z460 1538 aa20.89■□□□□ 0.93
CCRL2-202ENST00000399036 CUL7Q14999 1698 aa20.88■□□□□ 0.93
CCRL2-202ENST00000399036 CEP170Q5SW79 1584 aa20.88■□□□□ 0.93
CCRL2-202ENST00000399036 CARMIL1Q5VZK9 1371 aa20.87■□□□□ 0.93
CCRL2-202ENST00000399036 NUP160Q12769 1436 aa20.86■□□□□ 0.93
CCRL2-202ENST00000399036 ARHGEF11O15085 1522 aa20.79■□□□□ 0.92
CCRL2-202ENST00000399036 FAM9AQ8IZU1 332 aaPredicted RBP20.79■□□□□ 0.92
CCRL2-202ENST00000399036 RIMBP3CA6NJZ7 1639 aa20.79■□□□□ 0.92
CCRL2-202ENST00000399036 RIMBP3BA6NNM3 1639 aa20.79■□□□□ 0.92
CCRL2-202ENST00000399036 RIMBP3Q9UFD9 1639 aa20.79■□□□□ 0.92
CCRL2-202ENST00000399036 RAPGEF2Q9Y4G8 1499 aa20.74■□□□□ 0.91
CCRL2-202ENST00000399036 CSRNP3Q8WYN3 585 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms