RNA–Protein interactions for RNA: ENST00000398421.6

NCF1-202, Transcript of neutrophil cytosolic factor 1, humanhuman

TSL 2

Gene NCF1, Length 2,354 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCF1-202ENST00000398421 NISCHQ9Y2I1 1504 aa47.83■■■■■ 5.25
NCF1-202ENST00000398421 CCDC180Q9P1Z9 1646 aa40.94■■■■■ 4.14
NCF1-202ENST00000398421 SHROOM4Q9ULL8 1493 aa40.39■■■■■ 4.06
NCF1-202ENST00000398421 ZCCHC6Q5VYS8 1495 aaKnown RBP40.34■■■■■ 4.05
NCF1-202ENST00000398421 DCAF8L2P0C7V8 631 aa39.83■■■■□ 3.97
NCF1-202ENST00000398421 SUPT5HO00267 1087 aaKnown RBP39.26■■■■□ 3.88
NCF1-202ENST00000398421 DCAF1Q9Y4B6 1507 aa39.19■■■■□ 3.86
NCF1-202ENST00000398421 ABCC9O60706 1549 aa38.52■■■■□ 3.76
NCF1-202ENST00000398421 SCRIBQ14160 1630 aa38.34■■■■□ 3.73
NCF1-202ENST00000398421 MYO15BQ96JP2 1530 aa38.27■■■■□ 3.72
NCF1-202ENST00000398421 NACADO15069 1562 aa37.97■■■■□ 3.67
NCF1-202ENST00000398421 CHIC1Q5VXU3 224 aa37.87■■■■□ 3.65
NCF1-202ENST00000398421 RSF1Q96T23 1441 aaPredicted RBP37.62■■■■□ 3.61
NCF1-202ENST00000398421 RB1CC1Q8TDY2 1594 aa37.5■■■■□ 3.59
NCF1-202ENST00000398421 CECR2Q9BXF3 1484 aa37.42■■■■□ 3.58
NCF1-202ENST00000398421 MROH2BQ7Z745 1585 aa37.2■■■■□ 3.55
NCF1-202ENST00000398421 UNC13AQ9UPW8 1703 aa37.05■■■■□ 3.52
NCF1-202ENST00000398421 WIZO95785 1651 aa36.99■■■■□ 3.51
NCF1-202ENST00000398421 LOC105371045A0A1W2PR82 267 aa36.78■■■■□ 3.48
NCF1-202ENST00000398421 BAZ1AQ9NRL2 1556 aaPredicted RBP36.75■■■■□ 3.47
NCF1-202ENST00000398421 PABPN1Q86U42 306 aaKnown RBP eCLIP36.72■■■■□ 3.47
NCF1-202ENST00000398421 BICRAQ9NZM4 1560 aa36.6■■■■□ 3.45
NCF1-202ENST00000398421 SMARCA4P51532 1647 aa36.57■■■■□ 3.45
NCF1-202ENST00000398421 TRIM41Q8WV44 630 aa36.57■■■■□ 3.44
NCF1-202ENST00000398421 TOP2AP11388 1531 aaKnown RBP36.33■■■■□ 3.41
NCF1-202ENST00000398421 FAM9AQ8IZU1 332 aaPredicted RBP36.32■■■■□ 3.41
NCF1-202ENST00000398421 EIF4G1Q04637 1599 aaKnown RBP36.21■■■■□ 3.39
NCF1-202ENST00000398421 CCDC88BA6NC98 1476 aa36.2■■■■□ 3.39
NCF1-202ENST00000398421 SMARCA2P51531 1590 aa36.15■■■■□ 3.38
NCF1-202ENST00000398421 EHMT2Q96KQ7 1210 aa36.08■■■■□ 3.37
NCF1-202ENST00000398421 PCGF6Q9BYE7 350 aa36.04■■■■□ 3.36
NCF1-202ENST00000398421 ABCC8Q09428 1581 aa35.94■■■■□ 3.34
NCF1-202ENST00000398421 PEG3Q9GZU2 1588 aa35.87■■■■□ 3.33
NCF1-202ENST00000398421 ATAD2BQ9ULI0 1458 aa35.78■■■■□ 3.32
NCF1-202ENST00000398421 BAZ1BQ9UIG0 1483 aaKnown RBP35.63■■■■□ 3.29
NCF1-202ENST00000398421 HRCP23327 699 aa35.56■■■■□ 3.28
NCF1-202ENST00000398421 SOGA1O94964 1423 aa35.46■■■■□ 3.27
NCF1-202ENST00000398421 TRIM26Q12899 539 aaPredicted RBP35.43■■■■□ 3.26
NCF1-202ENST00000398421 RUSC2Q8N2Y8 1516 aa35.36■■■■□ 3.25
NCF1-202ENST00000398421 WRNQ14191 1432 aaPredicted RBP eCLIP35.33■■■■□ 3.25
NCF1-202ENST00000398421 SYNJ1O43426 1573 aa35.25■■■■□ 3.23
NCF1-202ENST00000398421 PPARGC1BQ86YN6 1023 aaKnown RBP35.18■■■■□ 3.22
NCF1-202ENST00000398421 NCAPD3P42695 1498 aa35.16■■■■□ 3.22
NCF1-202ENST00000398421 CSRNP3Q8WYN3 585 aa35.12■■■■□ 3.21
NCF1-202ENST00000398421 HMGXB3Q12766 1538 aa35.1■■■■□ 3.21
NCF1-202ENST00000398421 EEA1Q15075 1411 aa35.01■■■■□ 3.2
NCF1-202ENST00000398421 CEP162Q5TB80 1403 aa34.94■■■■□ 3.18
NCF1-202ENST00000398421 UBTFP17480 764 aaKnown RBP34.93■■■■□ 3.18
NCF1-202ENST00000398421 TNIKQ9UKE5 1360 aa34.9■■■■□ 3.18
NCF1-202ENST00000398421 GOLGA3Q08378 1498 aa34.82■■■■□ 3.16
NCF1-202ENST00000398421 TOP2BQ02880 1626 aa34.82■■■■□ 3.16
NCF1-202ENST00000398421 TTBK1Q5TCY1 1321 aaPredicted RBP34.74■■■■□ 3.15
NCF1-202ENST00000398421 BIVM-ERCC5R4GMW8 1640 aa34.72■■■■□ 3.15
NCF1-202ENST00000398421 CFTRP13569 1480 aa34.72■■■■□ 3.15
NCF1-202ENST00000398421 CC2D2AQ9P2K1 1620 aa34.68■■■■□ 3.14
NCF1-202ENST00000398421 CEP164Q9UPV0 1460 aa34.68■■■■□ 3.14
NCF1-202ENST00000398421 CUX1P39880 1505 aa34.67■■■■□ 3.14
NCF1-202ENST00000398421 KIF21BO75037 1637 aa34.65■■■■□ 3.14
NCF1-202ENST00000398421 RAPGEF2Q9Y4G8 1499 aa34.61■■■■□ 3.13
NCF1-202ENST00000398421 RANGAP1P46060 587 aaPredicted RBP34.49■■■■□ 3.11
NCF1-202ENST00000398421 CADPSQ9ULU8 1353 aa34.44■■■■□ 3.1
NCF1-202ENST00000398421 PRDM2Q13029 1718 aa34.42■■■■□ 3.1
NCF1-202ENST00000398421 CLIP1P30622 1438 aa34.42■■■■□ 3.1
NCF1-202ENST00000398421 PRXQ9BXM0 1461 aa34.3■■■■□ 3.08
NCF1-202ENST00000398421 KIF27Q86VH2 1401 aa34.26■■■■□ 3.08
NCF1-202ENST00000398421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.26■■■■□ 3.07
NCF1-202ENST00000398421 ZEB1P37275 1124 aaPredicted RBP34.25■■■■□ 3.07
NCF1-202ENST00000398421 ERICH3Q5RHP9 1530 aa34.19■■■■□ 3.06
NCF1-202ENST00000398421 NESP48681 1621 aa34.17■■■■□ 3.06
NCF1-202ENST00000398421 VPS8Q8N3P4 1428 aa34.17■■■■□ 3.06
NCF1-202ENST00000398421 FGD5Q6ZNL6 1462 aa34.13■■■■□ 3.05
NCF1-202ENST00000398421 FANCD2Q9BXW9 1451 aa34.13■■■■□ 3.05
NCF1-202ENST00000398421 CUX2O14529 1486 aa34.13■■■■□ 3.05
NCF1-202ENST00000398421 DNAJC5BQ9UF47 199 aa34.11■■■■□ 3.05
NCF1-202ENST00000398421 CCER1Q8TC90 406 aaPredicted RBP34.04■■■■□ 3.04
NCF1-202ENST00000398421 IGF1RP08069 1367 aa34■■■■□ 3.03
NCF1-202ENST00000398421 ARAP1Q96P48 1450 aa34■■■■□ 3.03
NCF1-202ENST00000398421 APLP2Q06481 763 aa33.91■■■■□ 3.02
NCF1-202ENST00000398421 RAD54L2Q9Y4B4 1467 aa33.9■■■■□ 3.02
NCF1-202ENST00000398421 TOPBP1Q92547 1522 aa33.86■■■■□ 3.01
NCF1-202ENST00000398421 DNMBPQ6XZF7 1577 aa33.86■■■■□ 3.01
NCF1-202ENST00000398421 CARMIL1Q5VZK9 1371 aa33.83■■■■□ 3.01
NCF1-202ENST00000398421 HNRNPUL2Q1KMD3 747 aaKnown RBP33.82■■■■□ 3
NCF1-202ENST00000398421 POLA1P09884 1462 aaPredicted RBP33.81■■■■□ 3
NCF1-202ENST00000398421 ARHGAP35Q9NRY4 1499 aa33.8■■■■□ 3
NCF1-202ENST00000398421 KANK4Q5T7N3 995 aaPredicted RBP33.75■■■□□ 2.99
NCF1-202ENST00000398421 LAMC3Q9Y6N6 1575 aa33.74■■■□□ 2.99
NCF1-202ENST00000398421 URB2Q14146 1524 aaKnown RBP33.72■■■□□ 2.99
NCF1-202ENST00000398421 ABCA10Q8WWZ4 1543 aa33.68■■■□□ 2.98
NCF1-202ENST00000398421 KIF21AQ7Z4S6 1674 aa33.57■■■□□ 2.96
NCF1-202ENST00000398421 PDS5BQ9NTI5 1447 aa33.53■■■□□ 2.96
NCF1-202ENST00000398421 P3H3Q8IVL6 736 aa33.52■■■□□ 2.96
NCF1-202ENST00000398421 TDRD9Q8NDG6 1382 aaKnown RBP33.5■■■□□ 2.95
NCF1-202ENST00000398421 WDR97A6NE52 1622 aa33.48■■■□□ 2.95
NCF1-202ENST00000398421 CUL7Q14999 1698 aa33.37■■■□□ 2.93
NCF1-202ENST00000398421 ABCA5Q8WWZ7 1642 aa33.35■■■□□ 2.93
NCF1-202ENST00000398421 FHOD3Q2V2M9 1422 aa33.33■■■□□ 2.93
NCF1-202ENST00000398421 GAPVD1Q14C86 1478 aa33.31■■■□□ 2.92
NCF1-202ENST00000398421 TIAM1Q13009 1591 aa33.29■■■□□ 2.92
NCF1-202ENST00000398421 RRBP1Q9P2E9 1410 aaKnown RBP33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms