RNA–Protein interactions for RNA: ENST00000398372.2

SMARCE1P6-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6, humanhuman

BASIC

Gene SMARCE1P6, Length 1,216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P6-201ENST00000398372 AEBP2Q6ZN18 517 aaPredicted RBP15.98■□□□□ 0.15
SMARCE1P6-201ENST00000398372 NISCHQ9Y2I1 1504 aa15.51■□□□□ 0.07
SMARCE1P6-201ENST00000398372 CHIC1Q5VXU3 224 aa14.89□□□□□ -0.03
SMARCE1P6-201ENST00000398372 ABCC9O60706 1549 aa14.68□□□□□ -0.06
SMARCE1P6-201ENST00000398372 DNAJC5BQ9UF47 199 aa14.35□□□□□ -0.11
SMARCE1P6-201ENST00000398372 CCDC180Q9P1Z9 1646 aa14.08□□□□□ -0.16
SMARCE1P6-201ENST00000398372 SENP3Q9H4L4 574 aaPredicted RBP13.69□□□□□ -0.22
SMARCE1P6-201ENST00000398372 RB1CC1Q8TDY2 1594 aa13.66□□□□□ -0.22
SMARCE1P6-201ENST00000398372 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMARCE1P6-201ENST00000398372 UNC13AQ9UPW8 1703 aa13.45□□□□□ -0.26
SMARCE1P6-201ENST00000398372 PHF23Q9BUL5 403 aaPredicted RBP13.45□□□□□ -0.26
SMARCE1P6-201ENST00000398372 DNAJC5Q9H3Z4 198 aa13.45□□□□□ -0.26
SMARCE1P6-201ENST00000398372 NACADO15069 1562 aa13.43□□□□□ -0.26
SMARCE1P6-201ENST00000398372 BICRAQ9NZM4 1560 aa13.38□□□□□ -0.27
SMARCE1P6-201ENST00000398372 DCAF8L2P0C7V8 631 aa13.37□□□□□ -0.27
SMARCE1P6-201ENST00000398372 CECR2Q9BXF3 1484 aa13.24□□□□□ -0.29
SMARCE1P6-201ENST00000398372 CC2D2AQ9P2K1 1620 aa13.22□□□□□ -0.29
SMARCE1P6-201ENST00000398372 MYO15BQ96JP2 1530 aa13.05□□□□□ -0.32
SMARCE1P6-201ENST00000398372 EIF4G1Q04637 1599 aaKnown RBP13.04□□□□□ -0.32
SMARCE1P6-201ENST00000398372 SHROOM4Q9ULL8 1493 aa12.97□□□□□ -0.33
SMARCE1P6-201ENST00000398372 POTEDQ86YR6 584 aa12.92□□□□□ -0.34
SMARCE1P6-201ENST00000398372 SCRIBQ14160 1630 aa12.88□□□□□ -0.35
SMARCE1P6-201ENST00000398372 FOXD1Q16676 465 aa12.85□□□□□ -0.35
SMARCE1P6-201ENST00000398372 CUX2O14529 1486 aa12.78□□□□□ -0.36
SMARCE1P6-201ENST00000398372 ZCCHC6Q5VYS8 1495 aaKnown RBP12.74□□□□□ -0.37
SMARCE1P6-201ENST00000398372 DCAF1Q9Y4B6 1507 aa12.71□□□□□ -0.38
SMARCE1P6-201ENST00000398372 TRIM41Q8WV44 630 aa12.65□□□□□ -0.38
SMARCE1P6-201ENST00000398372 ERCC6Q03468 1493 aa12.64□□□□□ -0.39
SMARCE1P6-201ENST00000398372 NESP48681 1621 aa12.51□□□□□ -0.41
SMARCE1P6-201ENST00000398372 NCAPD3P42695 1498 aa12.45□□□□□ -0.42
SMARCE1P6-201ENST00000398372 THOC2Q8NI27 1593 aaKnown RBP12.41□□□□□ -0.42
SMARCE1P6-201ENST00000398372 ATAD2BQ9ULI0 1458 aa12.35□□□□□ -0.43
SMARCE1P6-201ENST00000398372 SMARCA2P51531 1590 aa12.3□□□□□ -0.44
SMARCE1P6-201ENST00000398372 KIF21AQ7Z4S6 1674 aa12.28□□□□□ -0.44
SMARCE1P6-201ENST00000398372 HMGXB3Q12766 1538 aa12.27□□□□□ -0.45
SMARCE1P6-201ENST00000398372 MSH5O43196 834 aa12.22□□□□□ -0.45
SMARCE1P6-201ENST00000398372 LAMC3Q9Y6N6 1575 aa12.21□□□□□ -0.46
SMARCE1P6-201ENST00000398372 SMARCA4P51532 1647 aa12.2□□□□□ -0.46
SMARCE1P6-201ENST00000398372 BAZ1BQ9UIG0 1483 aaKnown RBP12.17□□□□□ -0.46
SMARCE1P6-201ENST00000398372 BAZ1AQ9NRL2 1556 aaPredicted RBP12.17□□□□□ -0.46
SMARCE1P6-201ENST00000398372 OSCARQ8IYS5 282 aa12.16□□□□□ -0.46
SMARCE1P6-201ENST00000398372 PDS5BQ9NTI5 1447 aa12.15□□□□□ -0.46
SMARCE1P6-201ENST00000398372 MRC2Q9UBG0 1479 aa12.11□□□□□ -0.47
SMARCE1P6-201ENST00000398372 PLPPR3Q6T4P5 718 aa12.11□□□□□ -0.47
SMARCE1P6-201ENST00000398372 WDR62O43379 1518 aa12.1□□□□□ -0.47
SMARCE1P6-201ENST00000398372 RIMBP3CA6NJZ7 1639 aa12.08□□□□□ -0.48
SMARCE1P6-201ENST00000398372 RIMBP3BA6NNM3 1639 aa12.08□□□□□ -0.48
SMARCE1P6-201ENST00000398372 RIMBP3Q9UFD9 1639 aa12.08□□□□□ -0.48
SMARCE1P6-201ENST00000398372 PEG3Q9GZU2 1588 aa12.05□□□□□ -0.48
SMARCE1P6-201ENST00000398372 CADPSQ9ULU8 1353 aa12.05□□□□□ -0.48
SMARCE1P6-201ENST00000398372 MROH2BQ7Z745 1585 aa11.99□□□□□ -0.49
SMARCE1P6-201ENST00000398372 ARHGEF11O15085 1522 aa11.96□□□□□ -0.5
SMARCE1P6-201ENST00000398372 TRHP20396 242 aaPredicted RBP11.95□□□□□ -0.5
SMARCE1P6-201ENST00000398372 CYB5RLQ6IPT4 315 aa11.95□□□□□ -0.5
SMARCE1P6-201ENST00000398372 CEP164Q9UPV0 1460 aa11.94□□□□□ -0.5
SMARCE1P6-201ENST00000398372 FANCD2Q9BXW9 1451 aa11.91□□□□□ -0.5
SMARCE1P6-201ENST00000398372 URB2Q14146 1524 aaKnown RBP11.89□□□□□ -0.51
SMARCE1P6-201ENST00000398372 ZNF608Q9ULD9 1512 aaPredicted RBP11.85□□□□□ -0.51
SMARCE1P6-201ENST00000398372 PIAS4Q8N2W9 510 aaPredicted RBP11.84□□□□□ -0.51
SMARCE1P6-201ENST00000398372 ARAP1Q96P48 1450 aa11.83□□□□□ -0.52
SMARCE1P6-201ENST00000398372 WIZO95785 1651 aa11.83□□□□□ -0.52
SMARCE1P6-201ENST00000398372 CFTRP13569 1480 aa11.8□□□□□ -0.52
SMARCE1P6-201ENST00000398372 CHD1O14646 1710 aa11.74□□□□□ -0.53
SMARCE1P6-201ENST00000398372 IFT140Q96RY7 1462 aa11.72□□□□□ -0.53
SMARCE1P6-201ENST00000398372 EIF4G3O43432 1585 aaKnown RBP11.69□□□□□ -0.54
SMARCE1P6-201ENST00000398372 FBLN2P98095 1184 aa11.67□□□□□ -0.54
SMARCE1P6-201ENST00000398372 AQRO60306 1485 aaKnown RBP eCLIP11.67□□□□□ -0.54
SMARCE1P6-201ENST00000398372 RSF1Q96T23 1441 aaPredicted RBP11.66□□□□□ -0.54
SMARCE1P6-201ENST00000398372 TOPBP1Q92547 1522 aa11.64□□□□□ -0.55
SMARCE1P6-201ENST00000398372 PRDM2Q13029 1718 aa11.61□□□□□ -0.55
SMARCE1P6-201ENST00000398372 ILDR1Q86SU0 546 aaPredicted RBP11.6□□□□□ -0.55
SMARCE1P6-201ENST00000398372 PPP6R1Q9UPN7 881 aa11.6□□□□□ -0.55
SMARCE1P6-201ENST00000398372 TARBP1Q13395 1621 aaKnown RBP11.6□□□□□ -0.55
SMARCE1P6-201ENST00000398372 CLASP1Q7Z460 1538 aa11.57□□□□□ -0.56
SMARCE1P6-201ENST00000398372 TOP2AP11388 1531 aaKnown RBP11.56□□□□□ -0.56
SMARCE1P6-201ENST00000398372 DNMBPQ6XZF7 1577 aa11.52□□□□□ -0.57
SMARCE1P6-201ENST00000398372 TDRD9Q8NDG6 1382 aaKnown RBP11.52□□□□□ -0.57
SMARCE1P6-201ENST00000398372 ADRA2BP18089 450 aa11.51□□□□□ -0.57
SMARCE1P6-201ENST00000398372 CCDC88BA6NC98 1476 aa11.51□□□□□ -0.57
SMARCE1P6-201ENST00000398372 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
SMARCE1P6-201ENST00000398372 ABCC8Q09428 1581 aa11.5□□□□□ -0.57
SMARCE1P6-201ENST00000398372 SNAPC4Q5SXM2 1469 aa11.49□□□□□ -0.57
SMARCE1P6-201ENST00000398372 POLA1P09884 1462 aaPredicted RBP11.48□□□□□ -0.57
SMARCE1P6-201ENST00000398372 GAPVD1Q14C86 1478 aa11.47□□□□□ -0.57
SMARCE1P6-201ENST00000398372 CHMP7Q8WUX9 453 aaPredicted RBP11.47□□□□□ -0.57
SMARCE1P6-201ENST00000398372 SYNJ1O43426 1573 aa11.45□□□□□ -0.58
SMARCE1P6-201ENST00000398372 ERCC6L2Q5T890 1561 aa11.44□□□□□ -0.58
SMARCE1P6-201ENST00000398372 SOGA1O94964 1423 aa11.43□□□□□ -0.58
SMARCE1P6-201ENST00000398372 KDM4FA0A1W2PPD8 638 aa11.43□□□□□ -0.58
SMARCE1P6-201ENST00000398372 KIF13AQ9H1H9 1805 aa11.4□□□□□ -0.58
SMARCE1P6-201ENST00000398372 MAGI1Q96QZ7 1491 aaPredicted RBP11.38□□□□□ -0.59
SMARCE1P6-201ENST00000398372 SYNJ2O15056 1496 aa11.38□□□□□ -0.59
SMARCE1P6-201ENST00000398372 GRIN2BQ13224 1484 aa11.35□□□□□ -0.59
SMARCE1P6-201ENST00000398372 FGD5Q6ZNL6 1462 aa11.34□□□□□ -0.59
SMARCE1P6-201ENST00000398372 WDR97A6NE52 1622 aa11.31□□□□□ -0.6
SMARCE1P6-201ENST00000398372 PBRM1Q86U86 1689 aa11.3□□□□□ -0.6
SMARCE1P6-201ENST00000398372 CUX1P39880 1505 aa11.29□□□□□ -0.6
SMARCE1P6-201ENST00000398372 CEP170Q5SW79 1584 aa11.28□□□□□ -0.6
SMARCE1P6-201ENST00000398372 SUPT5HO00267 1087 aaKnown RBP11.27□□□□□ -0.61
SMARCE1P6-201ENST00000398372 FAM69CQ0P6D2 419 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms