RNA–Protein interactions for RNA: ENST00000397561.3

LDHAP4-201, Transcript of lactate dehydrogenase A pseudogene 4, humanhuman

BASIC

Gene LDHAP4, Length 998 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHAP4-201ENST00000397561 NISCHQ9Y2I1 1504 aa21■□□□□ 0.95
LDHAP4-201ENST00000397561 AEBP2Q6ZN18 517 aaPredicted RBP18.81■□□□□ 0.6
LDHAP4-201ENST00000397561 CCDC180Q9P1Z9 1646 aa18.57■□□□□ 0.56
LDHAP4-201ENST00000397561 CHIC1Q5VXU3 224 aa17.73■□□□□ 0.43
LDHAP4-201ENST00000397561 ABCC9O60706 1549 aa17.68■□□□□ 0.42
LDHAP4-201ENST00000397561 ZCCHC6Q5VYS8 1495 aaKnown RBP17.61■□□□□ 0.41
LDHAP4-201ENST00000397561 DCAF1Q9Y4B6 1507 aa17.36■□□□□ 0.37
LDHAP4-201ENST00000397561 DCAF8L2P0C7V8 631 aa17.29■□□□□ 0.36
LDHAP4-201ENST00000397561 NACADO15069 1562 aa17.25■□□□□ 0.35
LDHAP4-201ENST00000397561 MYO15BQ96JP2 1530 aa17.23■□□□□ 0.35
LDHAP4-201ENST00000397561 RB1CC1Q8TDY2 1594 aa17.19■□□□□ 0.34
LDHAP4-201ENST00000397561 UNC13AQ9UPW8 1703 aa17.07■□□□□ 0.32
LDHAP4-201ENST00000397561 SCRIBQ14160 1630 aa17■□□□□ 0.31
LDHAP4-201ENST00000397561 SHROOM4Q9ULL8 1493 aa16.89■□□□□ 0.29
LDHAP4-201ENST00000397561 BICRAQ9NZM4 1560 aa16.73■□□□□ 0.27
LDHAP4-201ENST00000397561 PABPN1Q86U42 306 aaKnown RBP eCLIP16.54■□□□□ 0.24
LDHAP4-201ENST00000397561 CECR2Q9BXF3 1484 aa16.34■□□□□ 0.21
LDHAP4-201ENST00000397561 SMARCA4P51532 1647 aa16.27■□□□□ 0.2
LDHAP4-201ENST00000397561 SENP3Q9H4L4 574 aaPredicted RBP16.26■□□□□ 0.19
LDHAP4-201ENST00000397561 BAZ1AQ9NRL2 1556 aaPredicted RBP16.25■□□□□ 0.19
LDHAP4-201ENST00000397561 MROH2BQ7Z745 1585 aa16.23■□□□□ 0.19
LDHAP4-201ENST00000397561 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.19
LDHAP4-201ENST00000397561 WIZO95785 1651 aa16.17■□□□□ 0.18
LDHAP4-201ENST00000397561 RSF1Q96T23 1441 aaPredicted RBP16.14■□□□□ 0.17
LDHAP4-201ENST00000397561 CC2D2AQ9P2K1 1620 aa16.07■□□□□ 0.16
LDHAP4-201ENST00000397561 PEG3Q9GZU2 1588 aa16.05■□□□□ 0.16
LDHAP4-201ENST00000397561 SUPT5HO00267 1087 aaKnown RBP16.04■□□□□ 0.16
LDHAP4-201ENST00000397561 SMARCA2P51531 1590 aa15.99■□□□□ 0.15
LDHAP4-201ENST00000397561 ATAD2BQ9ULI0 1458 aa15.98■□□□□ 0.15
LDHAP4-201ENST00000397561 PHF23Q9BUL5 403 aaPredicted RBP15.93■□□□□ 0.14
LDHAP4-201ENST00000397561 TOP2AP11388 1531 aaKnown RBP15.93■□□□□ 0.14
LDHAP4-201ENST00000397561 HMGXB3Q12766 1538 aa15.9■□□□□ 0.14
LDHAP4-201ENST00000397561 BAZ1BQ9UIG0 1483 aaKnown RBP15.89■□□□□ 0.13
LDHAP4-201ENST00000397561 NCAPD3P42695 1498 aa15.86■□□□□ 0.13
LDHAP4-201ENST00000397561 DNAJC5BQ9UF47 199 aa15.78■□□□□ 0.12
LDHAP4-201ENST00000397561 CCDC88BA6NC98 1476 aa15.71■□□□□ 0.1
LDHAP4-201ENST00000397561 PRDM2Q13029 1718 aa15.63■□□□□ 0.09
LDHAP4-201ENST00000397561 NESP48681 1621 aa15.46■□□□□ 0.07
LDHAP4-201ENST00000397561 LAMC3Q9Y6N6 1575 aa15.45■□□□□ 0.06
LDHAP4-201ENST00000397561 CFTRP13569 1480 aa15.45■□□□□ 0.06
LDHAP4-201ENST00000397561 KIF21AQ7Z4S6 1674 aa15.43■□□□□ 0.06
LDHAP4-201ENST00000397561 CADPSQ9ULU8 1353 aa15.4■□□□□ 0.06
LDHAP4-201ENST00000397561 ABCC8Q09428 1581 aa15.36■□□□□ 0.05
LDHAP4-201ENST00000397561 FANCD2Q9BXW9 1451 aa15.29■□□□□ 0.04
LDHAP4-201ENST00000397561 SYNJ1O43426 1573 aa15.26■□□□□ 0.03
LDHAP4-201ENST00000397561 BIVM-ERCC5R4GMW8 1640 aa15.25■□□□□ 0.03
LDHAP4-201ENST00000397561 CEP164Q9UPV0 1460 aa15.24■□□□□ 0.03
LDHAP4-201ENST00000397561 PDS5BQ9NTI5 1447 aa15.23■□□□□ 0.03
LDHAP4-201ENST00000397561 CUX1P39880 1505 aa15.21■□□□□ 0.03
LDHAP4-201ENST00000397561 TOP2BQ02880 1626 aa15.2■□□□□ 0.02
LDHAP4-201ENST00000397561 THOC2Q8NI27 1593 aaKnown RBP15.19■□□□□ 0.02
LDHAP4-201ENST00000397561 WRNQ14191 1432 aaPredicted RBP eCLIP15.19■□□□□ 0.02
LDHAP4-201ENST00000397561 DNMBPQ6XZF7 1577 aa15.17■□□□□ 0.02
LDHAP4-201ENST00000397561 ERCC6Q03468 1493 aa15.16■□□□□ 0.02
LDHAP4-201ENST00000397561 URB2Q14146 1524 aaKnown RBP15.16■□□□□ 0.02
LDHAP4-201ENST00000397561 DNAJC5Q9H3Z4 198 aa15.13■□□□□ 0.01
LDHAP4-201ENST00000397561 TOPBP1Q92547 1522 aa15.12■□□□□ 0.01
LDHAP4-201ENST00000397561 MRC2Q9UBG0 1479 aa15.12■□□□□ 0.01
LDHAP4-201ENST00000397561 FOXD1Q16676 465 aa15.11■□□□□ 0.01
LDHAP4-201ENST00000397561 WDR62O43379 1518 aa15.09■□□□□ 0.01
LDHAP4-201ENST00000397561 TRIM41Q8WV44 630 aa15.08■□□□□ 0
LDHAP4-201ENST00000397561 WDR97A6NE52 1622 aa15.06■□□□□ 0
LDHAP4-201ENST00000397561 FGD5Q6ZNL6 1462 aa15.06■□□□□ 0
LDHAP4-201ENST00000397561 POLA1P09884 1462 aaPredicted RBP15.02■□□□□ -0
LDHAP4-201ENST00000397561 TARBP1Q13395 1621 aaKnown RBP14.99□□□□□ -0.01
LDHAP4-201ENST00000397561 RAD54L2Q9Y4B4 1467 aa14.96□□□□□ -0.01
LDHAP4-201ENST00000397561 CUX2O14529 1486 aa14.95□□□□□ -0.02
LDHAP4-201ENST00000397561 RUSC2Q8N2Y8 1516 aa14.93□□□□□ -0.02
LDHAP4-201ENST00000397561 SOGA1O94964 1423 aa14.92□□□□□ -0.02
LDHAP4-201ENST00000397561 PBRM1Q86U86 1689 aa14.91□□□□□ -0.02
LDHAP4-201ENST00000397561 ABCA5Q8WWZ7 1642 aa14.9□□□□□ -0.02
LDHAP4-201ENST00000397561 ABCA10Q8WWZ4 1543 aa14.9□□□□□ -0.02
LDHAP4-201ENST00000397561 EIF4G3O43432 1585 aaKnown RBP14.86□□□□□ -0.03
LDHAP4-201ENST00000397561 IFT140Q96RY7 1462 aa14.86□□□□□ -0.03
LDHAP4-201ENST00000397561 ZNF608Q9ULD9 1512 aaPredicted RBP14.83□□□□□ -0.04
LDHAP4-201ENST00000397561 FAM9AQ8IZU1 332 aaPredicted RBP14.83□□□□□ -0.04
LDHAP4-201ENST00000397561 KIF27Q86VH2 1401 aa14.81□□□□□ -0.04
LDHAP4-201ENST00000397561 EEA1Q15075 1411 aa14.79□□□□□ -0.04
LDHAP4-201ENST00000397561 TDRD9Q8NDG6 1382 aaKnown RBP14.78□□□□□ -0.04
LDHAP4-201ENST00000397561 GAPVD1Q14C86 1478 aa14.77□□□□□ -0.04
LDHAP4-201ENST00000397561 POTEDQ86YR6 584 aa14.77□□□□□ -0.05
LDHAP4-201ENST00000397561 AQRO60306 1485 aaKnown RBP eCLIP14.76□□□□□ -0.05
LDHAP4-201ENST00000397561 CUL7Q14999 1698 aa14.76□□□□□ -0.05
LDHAP4-201ENST00000397561 KIF21BO75037 1637 aa14.75□□□□□ -0.05
LDHAP4-201ENST00000397561 ERICH3Q5RHP9 1530 aa14.74□□□□□ -0.05
LDHAP4-201ENST00000397561 ADAMTS12P58397 1594 aa14.72□□□□□ -0.05
LDHAP4-201ENST00000397561 CSRNP3Q8WYN3 585 aa14.69□□□□□ -0.06
LDHAP4-201ENST00000397561 IGF1RP08069 1367 aa14.69□□□□□ -0.06
LDHAP4-201ENST00000397561 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
LDHAP4-201ENST00000397561 CHD1O14646 1710 aa14.68□□□□□ -0.06
LDHAP4-201ENST00000397561 SNAPC4Q5SXM2 1469 aa14.67□□□□□ -0.06
LDHAP4-201ENST00000397561 PRXQ9BXM0 1461 aa14.67□□□□□ -0.06
LDHAP4-201ENST00000397561 CTTNBP2Q8WZ74 1663 aa14.66□□□□□ -0.06
LDHAP4-201ENST00000397561 RAPGEF2Q9Y4G8 1499 aa14.65□□□□□ -0.06
LDHAP4-201ENST00000397561 EHMT2Q96KQ7 1210 aa14.65□□□□□ -0.06
LDHAP4-201ENST00000397561 GOLGA3Q08378 1498 aa14.63□□□□□ -0.07
LDHAP4-201ENST00000397561 LOC105371045A0A1W2PR82 267 aa14.62□□□□□ -0.07
LDHAP4-201ENST00000397561 MAGI1Q96QZ7 1491 aaPredicted RBP14.62□□□□□ -0.07
LDHAP4-201ENST00000397561 CARMIL1Q5VZK9 1371 aa14.61□□□□□ -0.07
LDHAP4-201ENST00000397561 FHAD1B1AJZ9 1412 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 792.7 ms