RNA–Protein interactions for RNA: ENST00000397132.6

TULP3-201, Transcript of tubby like protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TULP3, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP3-201ENST00000397132 NISCHQ9Y2I1 1504 aa20.32■□□□□ 0.84
TULP3-201ENST00000397132 CCDC180Q9P1Z9 1646 aa18.02■□□□□ 0.48
TULP3-201ENST00000397132 ABCC9O60706 1549 aa17.63■□□□□ 0.41
TULP3-201ENST00000397132 NACADO15069 1562 aa16.96■□□□□ 0.31
TULP3-201ENST00000397132 RB1CC1Q8TDY2 1594 aa16.95■□□□□ 0.3
TULP3-201ENST00000397132 ZCCHC6Q5VYS8 1495 aaKnown RBP16.93■□□□□ 0.3
TULP3-201ENST00000397132 DCAF8L2P0C7V8 631 aa16.91■□□□□ 0.3
TULP3-201ENST00000397132 MYO15BQ96JP2 1530 aa16.9■□□□□ 0.3
TULP3-201ENST00000397132 DCAF1Q9Y4B6 1507 aa16.82■□□□□ 0.28
TULP3-201ENST00000397132 UNC13AQ9UPW8 1703 aa16.57■□□□□ 0.24
TULP3-201ENST00000397132 BICRAQ9NZM4 1560 aa16.49■□□□□ 0.23
TULP3-201ENST00000397132 PABPN1Q86U42 306 aaKnown RBP eCLIP16.49■□□□□ 0.23
TULP3-201ENST00000397132 SCRIBQ14160 1630 aa16.43■□□□□ 0.22
TULP3-201ENST00000397132 SHROOM4Q9ULL8 1493 aa16.31■□□□□ 0.2
TULP3-201ENST00000397132 DNAJC5BQ9UF47 199 aa16.23■□□□□ 0.19
TULP3-201ENST00000397132 EIF4G1Q04637 1599 aaKnown RBP16.03■□□□□ 0.16
TULP3-201ENST00000397132 CC2D2AQ9P2K1 1620 aa15.95■□□□□ 0.14
TULP3-201ENST00000397132 CECR2Q9BXF3 1484 aa15.85■□□□□ 0.13
TULP3-201ENST00000397132 SMARCA4P51532 1647 aa15.74■□□□□ 0.11
TULP3-201ENST00000397132 BAZ1AQ9NRL2 1556 aaPredicted RBP15.73■□□□□ 0.11
TULP3-201ENST00000397132 NCAPD3P42695 1498 aa15.68■□□□□ 0.1
TULP3-201ENST00000397132 ATAD2BQ9ULI0 1458 aa15.68■□□□□ 0.1
TULP3-201ENST00000397132 MROH2BQ7Z745 1585 aa15.65■□□□□ 0.1
TULP3-201ENST00000397132 SMARCA2P51531 1590 aa15.63■□□□□ 0.09
TULP3-201ENST00000397132 PEG3Q9GZU2 1588 aa15.62■□□□□ 0.09
TULP3-201ENST00000397132 HMGXB3Q12766 1538 aa15.58■□□□□ 0.09
TULP3-201ENST00000397132 BAZ1BQ9UIG0 1483 aaKnown RBP15.52■□□□□ 0.07
TULP3-201ENST00000397132 RSF1Q96T23 1441 aaPredicted RBP15.5■□□□□ 0.07
TULP3-201ENST00000397132 WIZO95785 1651 aa15.46■□□□□ 0.07
TULP3-201ENST00000397132 SUPT5HO00267 1087 aaKnown RBP15.38■□□□□ 0.05
TULP3-201ENST00000397132 TOP2AP11388 1531 aaKnown RBP15.3■□□□□ 0.04
TULP3-201ENST00000397132 NESP48681 1621 aa15.28■□□□□ 0.04
TULP3-201ENST00000397132 LAMC3Q9Y6N6 1575 aa15.22■□□□□ 0.03
TULP3-201ENST00000397132 CADPSQ9ULU8 1353 aa15.21■□□□□ 0.03
TULP3-201ENST00000397132 ERCC6Q03468 1493 aa15.17■□□□□ 0.02
TULP3-201ENST00000397132 CCDC88BA6NC98 1476 aa15.14■□□□□ 0.01
TULP3-201ENST00000397132 CFTRP13569 1480 aa15.13■□□□□ 0.01
TULP3-201ENST00000397132 PDS5BQ9NTI5 1447 aa15.13■□□□□ 0.01
TULP3-201ENST00000397132 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
TULP3-201ENST00000397132 CUX2O14529 1486 aa15.04■□□□□ -0
TULP3-201ENST00000397132 THOC2Q8NI27 1593 aaKnown RBP15.04■□□□□ -0
TULP3-201ENST00000397132 FANCD2Q9BXW9 1451 aa15.02□□□□□ -0.01
TULP3-201ENST00000397132 CEP164Q9UPV0 1460 aa14.98□□□□□ -0.01
TULP3-201ENST00000397132 CHIC1Q5VXU3 224 aa14.97□□□□□ -0.01
TULP3-201ENST00000397132 MRC2Q9UBG0 1479 aa14.97□□□□□ -0.01
TULP3-201ENST00000397132 PRDM2Q13029 1718 aa14.94□□□□□ -0.02
TULP3-201ENST00000397132 WDR62O43379 1518 aa14.93□□□□□ -0.02
TULP3-201ENST00000397132 URB2Q14146 1524 aaKnown RBP14.88□□□□□ -0.03
TULP3-201ENST00000397132 TOPBP1Q92547 1522 aa14.78□□□□□ -0.04
TULP3-201ENST00000397132 ABCC8Q09428 1581 aa14.77□□□□□ -0.05
TULP3-201ENST00000397132 DNMBPQ6XZF7 1577 aa14.75□□□□□ -0.05
TULP3-201ENST00000397132 IFT140Q96RY7 1462 aa14.68□□□□□ -0.06
TULP3-201ENST00000397132 CUX1P39880 1505 aa14.68□□□□□ -0.06
TULP3-201ENST00000397132 POLA1P09884 1462 aaPredicted RBP14.67□□□□□ -0.06
TULP3-201ENST00000397132 ZNF608Q9ULD9 1512 aaPredicted RBP14.63□□□□□ -0.07
TULP3-201ENST00000397132 TARBP1Q13395 1621 aaKnown RBP14.63□□□□□ -0.07
TULP3-201ENST00000397132 FGD5Q6ZNL6 1462 aa14.61□□□□□ -0.07
TULP3-201ENST00000397132 RAD54L2Q9Y4B4 1467 aa14.59□□□□□ -0.07
TULP3-201ENST00000397132 SOGA1O94964 1423 aa14.59□□□□□ -0.07
TULP3-201ENST00000397132 DNAJC5Q9H3Z4 198 aa14.59□□□□□ -0.07
TULP3-201ENST00000397132 WRNQ14191 1432 aaPredicted RBP eCLIP14.58□□□□□ -0.07
TULP3-201ENST00000397132 HRCP23327 699 aa14.56□□□□□ -0.08
TULP3-201ENST00000397132 TOP2BQ02880 1626 aa14.55□□□□□ -0.08
TULP3-201ENST00000397132 SYNJ1O43426 1573 aa14.54□□□□□ -0.08
TULP3-201ENST00000397132 EIF4G3O43432 1585 aaKnown RBP14.54□□□□□ -0.08
TULP3-201ENST00000397132 AQRO60306 1485 aaKnown RBP eCLIP14.54□□□□□ -0.083e-7■■■■■ 30.5
TULP3-201ENST00000397132 BIVM-ERCC5R4GMW8 1640 aa14.53□□□□□ -0.08
TULP3-201ENST00000397132 TDRD9Q8NDG6 1382 aaKnown RBP14.52□□□□□ -0.09
TULP3-201ENST00000397132 ABCA10Q8WWZ4 1543 aa14.5□□□□□ -0.09
TULP3-201ENST00000397132 WDR97A6NE52 1622 aa14.5□□□□□ -0.09
TULP3-201ENST00000397132 TRIM41Q8WV44 630 aa14.43□□□□□ -0.1
TULP3-201ENST00000397132 GAPVD1Q14C86 1478 aa14.43□□□□□ -0.1
TULP3-201ENST00000397132 OSCARQ8IYS5 282 aa14.42□□□□□ -0.1
TULP3-201ENST00000397132 ABCA5Q8WWZ7 1642 aa14.42□□□□□ -0.1
TULP3-201ENST00000397132 GRIN2BQ13224 1484 aa14.42□□□□□ -0.1
TULP3-201ENST00000397132 SNAPC4Q5SXM2 1469 aa14.39□□□□□ -0.11
TULP3-201ENST00000397132 MAGI1Q96QZ7 1491 aaPredicted RBP14.39□□□□□ -0.11
TULP3-201ENST00000397132 PBRM1Q86U86 1689 aa14.35□□□□□ -0.11
TULP3-201ENST00000397132 SYNJ2O15056 1496 aa14.34□□□□□ -0.11
TULP3-201ENST00000397132 CHD1O14646 1710 aa14.33□□□□□ -0.11
TULP3-201ENST00000397132 TRIM26Q12899 539 aaPredicted RBP14.33□□□□□ -0.12
TULP3-201ENST00000397132 FBLN2P98095 1184 aa14.33□□□□□ -0.12
TULP3-201ENST00000397132 PCGF6Q9BYE7 350 aa14.32□□□□□ -0.12
TULP3-201ENST00000397132 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
TULP3-201ENST00000397132 CHMP7Q8WUX9 453 aaPredicted RBP14.31□□□□□ -0.12
TULP3-201ENST00000397132 KIF27Q86VH2 1401 aa14.27□□□□□ -0.12
TULP3-201ENST00000397132 ADAMTS12P58397 1594 aa14.27□□□□□ -0.12
TULP3-201ENST00000397132 LOC105371045A0A1W2PR82 267 aa14.27□□□□□ -0.13
TULP3-201ENST00000397132 FHAD1B1AJZ9 1412 aa14.26□□□□□ -0.13
TULP3-201ENST00000397132 IGF1RP08069 1367 aa14.25□□□□□ -0.13
TULP3-201ENST00000397132 GRIN2AQ12879 1464 aa14.24□□□□□ -0.13
TULP3-201ENST00000397132 CLASP1Q7Z460 1538 aa14.23□□□□□ -0.13
TULP3-201ENST00000397132 FAM9AQ8IZU1 332 aaPredicted RBP14.22□□□□□ -0.13
TULP3-201ENST00000397132 ZEB1P37275 1124 aaPredicted RBP14.2□□□□□ -0.14
TULP3-201ENST00000397132 NUP160Q12769 1436 aa14.2□□□□□ -0.14
TULP3-201ENST00000397132 ARHGEF11O15085 1522 aa14.19□□□□□ -0.14
TULP3-201ENST00000397132 CEP170Q5SW79 1584 aa14.17□□□□□ -0.14
TULP3-201ENST00000397132 RIMBP3CA6NJZ7 1639 aa14.17□□□□□ -0.14
TULP3-201ENST00000397132 RIMBP3BA6NNM3 1639 aa14.17□□□□□ -0.14
TULP3-201ENST00000397132 RIMBP3Q9UFD9 1639 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms