RNA–Protein interactions for RNA: ENST00000396098.5

LPIN1-203, Transcript of lipin 1, humanhuman

TSL 1 (best) BASIC

Gene LPIN1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPIN1-203ENST00000396098 NISCHQ9Y2I1 1504 aa26.35■■□□□ 1.81
LPIN1-203ENST00000396098 CCDC180Q9P1Z9 1646 aa22.97■■□□□ 1.27
LPIN1-203ENST00000396098 ABCC9O60706 1549 aa22.08■■□□□ 1.12
LPIN1-203ENST00000396098 ZCCHC6Q5VYS8 1495 aaKnown RBP22.06■■□□□ 1.12
LPIN1-203ENST00000396098 DCAF8L2P0C7V8 631 aa22■■□□□ 1.11
LPIN1-203ENST00000396098 DCAF1Q9Y4B6 1507 aa21.75■■□□□ 1.07
LPIN1-203ENST00000396098 MYO15BQ96JP2 1530 aa21.58■■□□□ 1.05
LPIN1-203ENST00000396098 NACADO15069 1562 aa21.53■■□□□ 1.04
LPIN1-203ENST00000396098 SHROOM4Q9ULL8 1493 aa21.42■■□□□ 1.02
LPIN1-203ENST00000396098 RB1CC1Q8TDY2 1594 aa21.4■■□□□ 1.02
LPIN1-203ENST00000396098 SCRIBQ14160 1630 aa21.17■□□□□ 0.98
LPIN1-203ENST00000396098 PABPN1Q86U42 306 aaKnown RBP eCLIP20.86■□□□□ 0.93
LPIN1-203ENST00000396098 UNC13AQ9UPW8 1703 aa20.84■□□□□ 0.93
LPIN1-203ENST00000396098 BICRAQ9NZM4 1560 aa20.75■□□□□ 0.91
LPIN1-203ENST00000396098 SUPT5HO00267 1087 aaKnown RBP20.53■□□□□ 0.88
LPIN1-203ENST00000396098 CECR2Q9BXF3 1484 aa20.53■□□□□ 0.88
LPIN1-203ENST00000396098 RSF1Q96T23 1441 aaPredicted RBP20.39■□□□□ 0.86
LPIN1-203ENST00000396098 MROH2BQ7Z745 1585 aa20.36■□□□□ 0.85
LPIN1-203ENST00000396098 BAZ1AQ9NRL2 1556 aaPredicted RBP20.35■□□□□ 0.85
LPIN1-203ENST00000396098 SMARCA4P51532 1647 aa20.26■□□□□ 0.83
LPIN1-203ENST00000396098 EIF4G1Q04637 1599 aaKnown RBP20.15■□□□□ 0.82
LPIN1-203ENST00000396098 WIZO95785 1651 aa20.13■□□□□ 0.81
LPIN1-203ENST00000396098 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
LPIN1-203ENST00000396098 PEG3Q9GZU2 1588 aa20.01■□□□□ 0.79
LPIN1-203ENST00000396098 SMARCA2P51531 1590 aa19.99■□□□□ 0.79
LPIN1-203ENST00000396098 TOP2AP11388 1531 aaKnown RBP19.93■□□□□ 0.78
LPIN1-203ENST00000396098 NCAPD3P42695 1498 aa19.93■□□□□ 0.78
LPIN1-203ENST00000396098 BAZ1BQ9UIG0 1483 aaKnown RBP19.91■□□□□ 0.78
LPIN1-203ENST00000396098 CC2D2AQ9P2K1 1620 aa19.91■□□□□ 0.78
LPIN1-203ENST00000396098 HMGXB3Q12766 1538 aa19.8■□□□□ 0.76
LPIN1-203ENST00000396098 CCDC88BA6NC98 1476 aa19.78■□□□□ 0.76
LPIN1-203ENST00000396098 DNAJC5BQ9UF47 199 aa19.77■□□□□ 0.76
LPIN1-203ENST00000396098 CHIC1Q5VXU3 224 aa19.51■□□□□ 0.71
LPIN1-203ENST00000396098 CADPSQ9ULU8 1353 aa19.43■□□□□ 0.7
LPIN1-203ENST00000396098 CFTRP13569 1480 aa19.41■□□□□ 0.7
LPIN1-203ENST00000396098 TRIM41Q8WV44 630 aa19.32■□□□□ 0.68
LPIN1-203ENST00000396098 NESP48681 1621 aa19.3■□□□□ 0.68
LPIN1-203ENST00000396098 ABCC8Q09428 1581 aa19.25■□□□□ 0.67
LPIN1-203ENST00000396098 LAMC3Q9Y6N6 1575 aa19.22■□□□□ 0.67
LPIN1-203ENST00000396098 WRNQ14191 1432 aaPredicted RBP eCLIP19.19■□□□□ 0.66
LPIN1-203ENST00000396098 FANCD2Q9BXW9 1451 aa19.18■□□□□ 0.66
LPIN1-203ENST00000396098 PDS5BQ9NTI5 1447 aa19.16■□□□□ 0.66
LPIN1-203ENST00000396098 PRDM2Q13029 1718 aa19.1■□□□□ 0.65
LPIN1-203ENST00000396098 CEP164Q9UPV0 1460 aa19.06■□□□□ 0.64
LPIN1-203ENST00000396098 SYNJ1O43426 1573 aa19.06■□□□□ 0.64
LPIN1-203ENST00000396098 CUX1P39880 1505 aa19.04■□□□□ 0.64
LPIN1-203ENST00000396098 TOP2BQ02880 1626 aa19■□□□□ 0.63
LPIN1-203ENST00000396098 FAM9AQ8IZU1 332 aaPredicted RBP18.98■□□□□ 0.63
LPIN1-203ENST00000396098 KIF21AQ7Z4S6 1674 aa18.95■□□□□ 0.62
LPIN1-203ENST00000396098 ERCC6Q03468 1493 aa18.95■□□□□ 0.62
LPIN1-203ENST00000396098 BIVM-ERCC5R4GMW8 1640 aa18.94■□□□□ 0.62
LPIN1-203ENST00000396098 URB2Q14146 1524 aaKnown RBP18.94■□□□□ 0.62
LPIN1-203ENST00000396098 TOPBP1Q92547 1522 aa18.92■□□□□ 0.62
LPIN1-203ENST00000396098 DNMBPQ6XZF7 1577 aa18.91■□□□□ 0.62
LPIN1-203ENST00000396098 SOGA1O94964 1423 aa18.9■□□□□ 0.62
LPIN1-203ENST00000396098 MRC2Q9UBG0 1479 aa18.89■□□□□ 0.61
LPIN1-203ENST00000396098 FGD5Q6ZNL6 1462 aa18.88■□□□□ 0.61
LPIN1-203ENST00000396098 RUSC2Q8N2Y8 1516 aa18.83■□□□□ 0.61
LPIN1-203ENST00000396098 POLA1P09884 1462 aaPredicted RBP18.81■□□□□ 0.6
LPIN1-203ENST00000396098 LOC105371045A0A1W2PR82 267 aa18.8■□□□□ 0.6
LPIN1-203ENST00000396098 CSRNP3Q8WYN3 585 aa18.8■□□□□ 0.6
LPIN1-203ENST00000396098 RAD54L2Q9Y4B4 1467 aa18.79■□□□□ 0.6
LPIN1-203ENST00000396098 EEA1Q15075 1411 aa18.78■□□□□ 0.6
LPIN1-203ENST00000396098 WDR62O43379 1518 aa18.76■□□□□ 0.59
LPIN1-203ENST00000396098 KIF27Q86VH2 1401 aa18.74■□□□□ 0.59
LPIN1-203ENST00000396098 CUX2O14529 1486 aa18.73■□□□□ 0.59
LPIN1-203ENST00000396098 EHMT2Q96KQ7 1210 aa18.73■□□□□ 0.59
LPIN1-203ENST00000396098 THOC2Q8NI27 1593 aaKnown RBP18.72■□□□□ 0.59
LPIN1-203ENST00000396098 ABCA10Q8WWZ4 1543 aa18.7■□□□□ 0.58
LPIN1-203ENST00000396098 TDRD9Q8NDG6 1382 aaKnown RBP18.67■□□□□ 0.58
LPIN1-203ENST00000396098 IGF1RP08069 1367 aa18.64■□□□□ 0.57
LPIN1-203ENST00000396098 IFT140Q96RY7 1462 aa18.63■□□□□ 0.57
LPIN1-203ENST00000396098 TARBP1Q13395 1621 aaKnown RBP18.62■□□□□ 0.57
LPIN1-203ENST00000396098 AQRO60306 1485 aaKnown RBP eCLIP18.57■□□□□ 0.563e-7■■■■□ 22.8
LPIN1-203ENST00000396098 GAPVD1Q14C86 1478 aa18.57■□□□□ 0.56
LPIN1-203ENST00000396098 ZNF608Q9ULD9 1512 aaPredicted RBP18.55■□□□□ 0.56
LPIN1-203ENST00000396098 UBTFP17480 764 aaKnown RBP18.55■□□□□ 0.56
LPIN1-203ENST00000396098 WDR97A6NE52 1622 aa18.54■□□□□ 0.56
LPIN1-203ENST00000396098 PRXQ9BXM0 1461 aa18.53■□□□□ 0.56
LPIN1-203ENST00000396098 CARMIL1Q5VZK9 1371 aa18.53■□□□□ 0.56
LPIN1-203ENST00000396098 GOLGA3Q08378 1498 aa18.5■□□□□ 0.55
LPIN1-203ENST00000396098 RAPGEF2Q9Y4G8 1499 aa18.5■□□□□ 0.55
LPIN1-203ENST00000396098 ABCA5Q8WWZ7 1642 aa18.5■□□□□ 0.55
LPIN1-203ENST00000396098 KIF21BO75037 1637 aa18.49■□□□□ 0.55
LPIN1-203ENST00000396098 ERICH3Q5RHP9 1530 aa18.46■□□□□ 0.55
LPIN1-203ENST00000396098 GRIN2BQ13224 1484 aa18.45■□□□□ 0.54
LPIN1-203ENST00000396098 TNIKQ9UKE5 1360 aa18.44■□□□□ 0.54
LPIN1-203ENST00000396098 EIF4G3O43432 1585 aaKnown RBP18.4■□□□□ 0.54
LPIN1-203ENST00000396098 CUL7Q14999 1698 aa18.37■□□□□ 0.53
LPIN1-203ENST00000396098 FHAD1B1AJZ9 1412 aa18.37■□□□□ 0.53
LPIN1-203ENST00000396098 PBRM1Q86U86 1689 aa18.35■□□□□ 0.53
LPIN1-203ENST00000396098 SNAPC4Q5SXM2 1469 aa18.35■□□□□ 0.53
LPIN1-203ENST00000396098 RANGAP1P46060 587 aaPredicted RBP18.34■□□□□ 0.53
LPIN1-203ENST00000396098 CHMP7Q8WUX9 453 aaPredicted RBP18.31■□□□□ 0.52
LPIN1-203ENST00000396098 CEP162Q5TB80 1403 aa18.3■□□□□ 0.52
LPIN1-203ENST00000396098 FBLN2P98095 1184 aa18.3■□□□□ 0.52
LPIN1-203ENST00000396098 MAGI1Q96QZ7 1491 aaPredicted RBP18.3■□□□□ 0.52
LPIN1-203ENST00000396098 ADAMTS12P58397 1594 aa18.29■□□□□ 0.52
LPIN1-203ENST00000396098 SYNJ2O15056 1496 aa18.24■□□□□ 0.51
LPIN1-203ENST00000396098 CLIP1P30622 1438 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms