RNA–Protein interactions for RNA: ENST00000395990.6

CASC1-204, Transcript of cancer susceptibility 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CASC1, Length 2,417 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-204ENST00000395990 AEBP2Q6ZN18 517 aaPredicted RBP13.01□□□□□ -0.33
CASC1-204ENST00000395990 CHIC1Q5VXU3 224 aa12.7□□□□□ -0.38
CASC1-204ENST00000395990 NISCHQ9Y2I1 1504 aa11.97□□□□□ -0.49
CASC1-204ENST00000395990 PHF23Q9BUL5 403 aaPredicted RBP11.18□□□□□ -0.62
CASC1-204ENST00000395990 SENP3Q9H4L4 574 aaPredicted RBP11.02□□□□□ -0.65
CASC1-204ENST00000395990 CCDC180Q9P1Z9 1646 aa10.59□□□□□ -0.71
CASC1-204ENST00000395990 ABCC9O60706 1549 aa10.4□□□□□ -0.75
CASC1-204ENST00000395990 PLPPR3Q6T4P5 718 aa10.32□□□□□ -0.76
CASC1-204ENST00000395990 FOXD1Q16676 465 aa10.24□□□□□ -0.77
CASC1-204ENST00000395990 DCAF8L2P0C7V8 631 aa10.02□□□□□ -0.81
CASC1-204ENST00000395990 ZCCHC6Q5VYS8 1495 aaKnown RBP9.97□□□□□ -0.81
CASC1-204ENST00000395990 RB1CC1Q8TDY2 1594 aa9.97□□□□□ -0.81
CASC1-204ENST00000395990 NACADO15069 1562 aa9.96□□□□□ -0.81
CASC1-204ENST00000395990 MYO15BQ96JP2 1530 aa9.91□□□□□ -0.82
CASC1-204ENST00000395990 DCAF1Q9Y4B6 1507 aa9.88□□□□□ -0.83
CASC1-204ENST00000395990 PPP6R1Q9UPN7 881 aa9.87□□□□□ -0.83
CASC1-204ENST00000395990 ADRA2BP18089 450 aa9.86□□□□□ -0.83
CASC1-204ENST00000395990 PABPN1Q86U42 306 aaKnown RBP eCLIP9.74□□□□□ -0.85
CASC1-204ENST00000395990 UNC13AQ9UPW8 1703 aa9.74□□□□□ -0.85
CASC1-204ENST00000395990 SCRIBQ14160 1630 aa9.7□□□□□ -0.86
CASC1-204ENST00000395990 BICRAQ9NZM4 1560 aa9.7□□□□□ -0.86
CASC1-204ENST00000395990 PIAS4Q8N2W9 510 aaPredicted RBP9.66□□□□□ -0.86
CASC1-204ENST00000395990 DNAJC5BQ9UF47 199 aa9.56□□□□□ -0.88
CASC1-204ENST00000395990 SHROOM4Q9ULL8 1493 aa9.56□□□□□ -0.88
CASC1-204ENST00000395990 EIF4G1Q04637 1599 aaKnown RBP9.43□□□□□ -0.9
CASC1-204ENST00000395990 MSH5O43196 834 aa9.42□□□□□ -0.9
CASC1-204ENST00000395990 CC2D2AQ9P2K1 1620 aa9.39□□□□□ -0.91
CASC1-204ENST00000395990 CECR2Q9BXF3 1484 aa9.35□□□□□ -0.91
CASC1-204ENST00000395990 SMARCA4P51532 1647 aa9.27□□□□□ -0.92
CASC1-204ENST00000395990 BAZ1AQ9NRL2 1556 aaPredicted RBP9.26□□□□□ -0.93
CASC1-204ENST00000395990 MROH2BQ7Z745 1585 aa9.24□□□□□ -0.93
CASC1-204ENST00000395990 ATAD2BQ9ULI0 1458 aa9.23□□□□□ -0.93
CASC1-204ENST00000395990 NCAPD3P42695 1498 aa9.21□□□□□ -0.93
CASC1-204ENST00000395990 SMARCA2P51531 1590 aa9.2□□□□□ -0.94
CASC1-204ENST00000395990 PEG3Q9GZU2 1588 aa9.18□□□□□ -0.94
CASC1-204ENST00000395990 HMGXB3Q12766 1538 aa9.16□□□□□ -0.94
CASC1-204ENST00000395990 BAZ1BQ9UIG0 1483 aaKnown RBP9.15□□□□□ -0.94
CASC1-204ENST00000395990 RSF1Q96T23 1441 aaPredicted RBP9.15□□□□□ -0.95
CASC1-204ENST00000395990 WIZO95785 1651 aa9.12□□□□□ -0.95
CASC1-204ENST00000395990 PPP4R3CPQ6ZMV5 832 aa9.1□□□□□ -0.95
CASC1-204ENST00000395990 TOP2AP11388 1531 aaKnown RBP9.02□□□□□ -0.97
CASC1-204ENST00000395990 NESP48681 1621 aa9.01□□□□□ -0.97
CASC1-204ENST00000395990 SCAF1Q9H7N4 1312 aaKnown RBP8.99□□□□□ -0.97
CASC1-204ENST00000395990 CADPSQ9ULU8 1353 aa8.96□□□□□ -0.98
CASC1-204ENST00000395990 LAMC3Q9Y6N6 1575 aa8.95□□□□□ -0.98
CASC1-204ENST00000395990 ERCC6Q03468 1493 aa8.94□□□□□ -0.98
CASC1-204ENST00000395990 SUPT5HO00267 1087 aaKnown RBP8.94□□□□□ -0.98
CASC1-204ENST00000395990 MAPK8IP2Q13387 824 aaPredicted RBP8.94□□□□□ -0.98
CASC1-204ENST00000395990 CCDC88BA6NC98 1476 aa8.94□□□□□ -0.98
CASC1-204ENST00000395990 KCNA4P22459 653 aa8.92□□□□□ -0.98
CASC1-204ENST00000395990 CFTRP13569 1480 aa8.91□□□□□ -0.98
CASC1-204ENST00000395990 PDS5BQ9NTI5 1447 aa8.9□□□□□ -0.98
CASC1-204ENST00000395990 KIF21AQ7Z4S6 1674 aa8.87□□□□□ -0.99
CASC1-204ENST00000395990 NCBP3Q53F19 620 aaKnown RBP8.85□□□□□ -0.99
CASC1-204ENST00000395990 FANCD2Q9BXW9 1451 aa8.85□□□□□ -0.99
CASC1-204ENST00000395990 THOC2Q8NI27 1593 aaKnown RBP8.84□□□□□ -0.99
CASC1-204ENST00000395990 CNKSR2Q8WXI2 1034 aa8.83□□□□□ -1
CASC1-204ENST00000395990 CUX2O14529 1486 aa8.83□□□□□ -1
CASC1-204ENST00000395990 CEP164Q9UPV0 1460 aa8.83□□□□□ -1
CASC1-204ENST00000395990 MRC2Q9UBG0 1479 aa8.81□□□□□ -1
CASC1-204ENST00000395990 DMRT2Q9Y5R5 561 aa8.8□□□□□ -1
CASC1-204ENST00000395990 PRDM2Q13029 1718 aa8.78□□□□□ -1
CASC1-204ENST00000395990 WDR62O43379 1518 aa8.78□□□□□ -1
CASC1-204ENST00000395990 URB2Q14146 1524 aaKnown RBP8.77□□□□□ -1.01
CASC1-204ENST00000395990 NPM3O75607 178 aaKnown RBP8.74□□□□□ -1.01
CASC1-204ENST00000395990 TOPBP1Q92547 1522 aa8.71□□□□□ -1.02
CASC1-204ENST00000395990 DNMBPQ6XZF7 1577 aa8.69□□□□□ -1.02
CASC1-204ENST00000395990 ABCC8Q09428 1581 aa8.68□□□□□ -1.02
CASC1-204ENST00000395990 CUX1P39880 1505 aa8.66□□□□□ -1.02
CASC1-204ENST00000395990 RNF216Q9NWF9 866 aaPredicted RBP8.65□□□□□ -1.02
CASC1-204ENST00000395990 POLA1P09884 1462 aaPredicted RBP8.64□□□□□ -1.03
CASC1-204ENST00000395990 IFT140Q96RY7 1462 aa8.64□□□□□ -1.03
CASC1-204ENST00000395990 ZNF608Q9ULD9 1512 aaPredicted RBP8.63□□□□□ -1.03
CASC1-204ENST00000395990 FGD5Q6ZNL6 1462 aa8.62□□□□□ -1.03
CASC1-204ENST00000395990 HOXD11P31277 338 aaPredicted RBP8.62□□□□□ -1.03
CASC1-204ENST00000395990 RAD54L2Q9Y4B4 1467 aa8.62□□□□□ -1.03
CASC1-204ENST00000395990 WRNQ14191 1432 aaPredicted RBP eCLIP8.61□□□□□ -1.03
CASC1-204ENST00000395990 TARBP1Q13395 1621 aaKnown RBP8.61□□□□□ -1.03
CASC1-204ENST00000395990 SOGA1O94964 1423 aa8.6□□□□□ -1.03
CASC1-204ENST00000395990 SYNJ1O43426 1573 aa8.59□□□□□ -1.03
CASC1-204ENST00000395990 AQRO60306 1485 aaKnown RBP eCLIP8.59□□□□□ -1.04
CASC1-204ENST00000395990 TDRD9Q8NDG6 1382 aaKnown RBP8.58□□□□□ -1.04
CASC1-204ENST00000395990 TOP2BQ02880 1626 aa8.57□□□□□ -1.04
CASC1-204ENST00000395990 POTEDQ86YR6 584 aa8.57□□□□□ -1.04
CASC1-204ENST00000395990 EIF4G3O43432 1585 aaKnown RBP8.57□□□□□ -1.04
CASC1-204ENST00000395990 BIVM-ERCC5R4GMW8 1640 aa8.56□□□□□ -1.04
CASC1-204ENST00000395990 DNAJC5Q9H3Z4 198 aa8.56□□□□□ -1.04
CASC1-204ENST00000395990 ABCA10Q8WWZ4 1543 aa8.53□□□□□ -1.04
CASC1-204ENST00000395990 WDR97A6NE52 1622 aa8.52□□□□□ -1.05
CASC1-204ENST00000395990 GAPVD1Q14C86 1478 aa8.5□□□□□ -1.05
CASC1-204ENST00000395990 GRIN2BQ13224 1484 aa8.49□□□□□ -1.05
CASC1-204ENST00000395990 ABCA5Q8WWZ7 1642 aa8.49□□□□□ -1.05
CASC1-204ENST00000395990 OSCARQ8IYS5 282 aa8.49□□□□□ -1.05
CASC1-204ENST00000395990 SNAPC4Q5SXM2 1469 aa8.49□□□□□ -1.05
CASC1-204ENST00000395990 SLC4A1APQ9BWU0 796 aaKnown RBP8.48□□□□□ -1.05
CASC1-204ENST00000395990 FBLN2P98095 1184 aa8.48□□□□□ -1.05
CASC1-204ENST00000395990 MAGI1Q96QZ7 1491 aaPredicted RBP8.46□□□□□ -1.05
CASC1-204ENST00000395990 PBRM1Q86U86 1689 aa8.45□□□□□ -1.06
CASC1-204ENST00000395990 CHD1O14646 1710 aa8.44□□□□□ -1.06
CASC1-204ENST00000395990 CHMP7Q8WUX9 453 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms