RNA–Protein interactions for RNA: ENST00000394799.6

GNL3-201, Transcript of G protein nucleolar 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GNL3, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNL3-201ENST00000394799 NISCHQ9Y2I1 1504 aa29.13■■■□□ 2.25
GNL3-201ENST00000394799 CCDC180Q9P1Z9 1646 aa25.54■■□□□ 1.68
GNL3-201ENST00000394799 ZCCHC6Q5VYS8 1495 aaKnown RBP24.43■■□□□ 1.5
GNL3-201ENST00000394799 ABCC9O60706 1549 aa24.33■■□□□ 1.48
GNL3-201ENST00000394799 DCAF8L2P0C7V8 631 aa24.13■■□□□ 1.45
GNL3-201ENST00000394799 DCAF1Q9Y4B6 1507 aa24.07■■□□□ 1.44
GNL3-201ENST00000394799 MYO15BQ96JP2 1530 aa23.86■■□□□ 1.41
GNL3-201ENST00000394799 NACADO15069 1562 aa23.81■■□□□ 1.4
GNL3-201ENST00000394799 RB1CC1Q8TDY2 1594 aa23.68■■□□□ 1.38
GNL3-201ENST00000394799 SHROOM4Q9ULL8 1493 aa23.64■■□□□ 1.37
GNL3-201ENST00000394799 SCRIBQ14160 1630 aa23.47■■□□□ 1.35
GNL3-201ENST00000394799 UNC13AQ9UPW8 1703 aa23.21■■□□□ 1.31
GNL3-201ENST00000394799 BICRAQ9NZM4 1560 aa22.94■■□□□ 1.26
GNL3-201ENST00000394799 PABPN1Q86U42 306 aaKnown RBP eCLIP22.88■■□□□ 1.25
GNL3-201ENST00000394799 CECR2Q9BXF3 1484 aa22.65■■□□□ 1.22
GNL3-201ENST00000394799 SUPT5HO00267 1087 aaKnown RBP22.62■■□□□ 1.21
GNL3-201ENST00000394799 BAZ1AQ9NRL2 1556 aaPredicted RBP22.52■■□□□ 1.2
GNL3-201ENST00000394799 RSF1Q96T23 1441 aaPredicted RBP22.5■■□□□ 1.19
GNL3-201ENST00000394799 MROH2BQ7Z745 1585 aa22.5■■□□□ 1.19
GNL3-201ENST00000394799 SMARCA4P51532 1647 aa22.46■■□□□ 1.19
GNL3-201ENST00000394799 WIZO95785 1651 aa22.33■■□□□ 1.17
GNL3-201ENST00000394799 EIF4G1Q04637 1599 aaKnown RBP22.28■■□□□ 1.16
GNL3-201ENST00000394799 PEG3Q9GZU2 1588 aa22.17■■□□□ 1.14
GNL3-201ENST00000394799 SMARCA2P51531 1590 aa22.13■■□□□ 1.13
GNL3-201ENST00000394799 ATAD2BQ9ULI0 1458 aa22.11■■□□□ 1.13
GNL3-201ENST00000394799 TOP2AP11388 1531 aaKnown RBP22.09■■□□□ 1.13
GNL3-201ENST00000394799 CC2D2AQ9P2K1 1620 aa22.01■■□□□ 1.11
GNL3-201ENST00000394799 BAZ1BQ9UIG0 1483 aaKnown RBP22■■□□□ 1.11
GNL3-201ENST00000394799 NCAPD3P42695 1498 aa21.95■■□□□ 1.1
GNL3-201ENST00000394799 HMGXB3Q12766 1538 aa21.93■■□□□ 1.1
GNL3-201ENST00000394799 CCDC88BA6NC98 1476 aa21.84■■□□□ 1.09
GNL3-201ENST00000394799 DNAJC5BQ9UF47 199 aa21.59■■□□□ 1.05
GNL3-201ENST00000394799 CHIC1Q5VXU3 224 aa21.52■■□□□ 1.04
GNL3-201ENST00000394799 CFTRP13569 1480 aa21.41■■□□□ 1.02
GNL3-201ENST00000394799 CADPSQ9ULU8 1353 aa21.38■■□□□ 1.01
GNL3-201ENST00000394799 PRDM2Q13029 1718 aa21.37■■□□□ 1.01
GNL3-201ENST00000394799 ABCC8Q09428 1581 aa21.33■■□□□ 1.01
GNL3-201ENST00000394799 NESP48681 1621 aa21.28■■□□□ 1
GNL3-201ENST00000394799 TRIM41Q8WV44 630 aa21.28■■□□□ 1
GNL3-201ENST00000394799 LAMC3Q9Y6N6 1575 aa21.27■■□□□ 1
GNL3-201ENST00000394799 WRNQ14191 1432 aaPredicted RBP eCLIP21.2■□□□□ 0.99
GNL3-201ENST00000394799 FANCD2Q9BXW9 1451 aa21.17■□□□□ 0.98
GNL3-201ENST00000394799 SYNJ1O43426 1573 aa21.14■□□□□ 0.98
GNL3-201ENST00000394799 PDS5BQ9NTI5 1447 aa21.1■□□□□ 0.97
GNL3-201ENST00000394799 TOP2BQ02880 1626 aa21.07■□□□□ 0.96
GNL3-201ENST00000394799 CEP164Q9UPV0 1460 aa21.07■□□□□ 0.96
GNL3-201ENST00000394799 BIVM-ERCC5R4GMW8 1640 aa21.06■□□□□ 0.96
GNL3-201ENST00000394799 CUX1P39880 1505 aa21.06■□□□□ 0.96
GNL3-201ENST00000394799 KIF21AQ7Z4S6 1674 aa21.06■□□□□ 0.96
GNL3-201ENST00000394799 DNMBPQ6XZF7 1577 aa20.95■□□□□ 0.94
GNL3-201ENST00000394799 TOPBP1Q92547 1522 aa20.91■□□□□ 0.94
GNL3-201ENST00000394799 URB2Q14146 1524 aaKnown RBP20.91■□□□□ 0.94
GNL3-201ENST00000394799 FAM9AQ8IZU1 332 aaPredicted RBP20.9■□□□□ 0.94
GNL3-201ENST00000394799 ERCC6Q03468 1493 aa20.89■□□□□ 0.94
GNL3-201ENST00000394799 FGD5Q6ZNL6 1462 aa20.87■□□□□ 0.93
GNL3-201ENST00000394799 MRC2Q9UBG0 1479 aa20.87■□□□□ 0.93
GNL3-201ENST00000394799 SOGA1O94964 1423 aa20.86■□□□□ 0.93
GNL3-201ENST00000394799 RUSC2Q8N2Y8 1516 aa20.8■□□□□ 0.92
GNL3-201ENST00000394799 EEA1Q15075 1411 aa20.79■□□□□ 0.92
GNL3-201ENST00000394799 POLA1P09884 1462 aaPredicted RBP20.79■□□□□ 0.92
GNL3-201ENST00000394799 THOC2Q8NI27 1593 aaKnown RBP20.76■□□□□ 0.91
GNL3-201ENST00000394799 WDR62O43379 1518 aa20.75■□□□□ 0.91
GNL3-201ENST00000394799 RAD54L2Q9Y4B4 1467 aa20.73■□□□□ 0.91
GNL3-201ENST00000394799 CUX2O14529 1486 aa20.7■□□□□ 0.9
GNL3-201ENST00000394799 KIF27Q86VH2 1401 aa20.69■□□□□ 0.9
GNL3-201ENST00000394799 LOC105371045A0A1W2PR82 267 aa20.69■□□□□ 0.9
GNL3-201ENST00000394799 CSRNP3Q8WYN3 585 aa20.68■□□□□ 0.9
GNL3-201ENST00000394799 ABCA10Q8WWZ4 1543 aa20.66■□□□□ 0.9
GNL3-201ENST00000394799 WDR97A6NE52 1622 aa20.65■□□□□ 0.9
GNL3-201ENST00000394799 EHMT2Q96KQ7 1210 aa20.63■□□□□ 0.89
GNL3-201ENST00000394799 TARBP1Q13395 1621 aaKnown RBP20.62■□□□□ 0.89
GNL3-201ENST00000394799 IFT140Q96RY7 1462 aa20.57■□□□□ 0.88
GNL3-201ENST00000394799 KIF21BO75037 1637 aa20.56■□□□□ 0.88
GNL3-201ENST00000394799 ABCA5Q8WWZ7 1642 aa20.54■□□□□ 0.88
GNL3-201ENST00000394799 TDRD9Q8NDG6 1382 aaKnown RBP20.53■□□□□ 0.88
GNL3-201ENST00000394799 GOLGA3Q08378 1498 aa20.51■□□□□ 0.87
GNL3-201ENST00000394799 IGF1RP08069 1367 aa20.5■□□□□ 0.87
GNL3-201ENST00000394799 GAPVD1Q14C86 1478 aa20.5■□□□□ 0.87
GNL3-201ENST00000394799 PRXQ9BXM0 1461 aa20.48■□□□□ 0.87
GNL3-201ENST00000394799 RAPGEF2Q9Y4G8 1499 aa20.45■□□□□ 0.86
GNL3-201ENST00000394799 ZNF608Q9ULD9 1512 aaPredicted RBP20.45■□□□□ 0.86
GNL3-201ENST00000394799 PBRM1Q86U86 1689 aa20.44■□□□□ 0.86
GNL3-201ENST00000394799 ERICH3Q5RHP9 1530 aa20.44■□□□□ 0.86
GNL3-201ENST00000394799 AQRO60306 1485 aaKnown RBP eCLIP20.44■□□□□ 0.869e-7■■■□□ 18.4
GNL3-201ENST00000394799 UBTFP17480 764 aaKnown RBP20.43■□□□□ 0.86
GNL3-201ENST00000394799 CUL7Q14999 1698 aa20.42■□□□□ 0.86
GNL3-201ENST00000394799 CARMIL1Q5VZK9 1371 aa20.41■□□□□ 0.86
GNL3-201ENST00000394799 EIF4G3O43432 1585 aaKnown RBP20.41■□□□□ 0.86
GNL3-201ENST00000394799 TNIKQ9UKE5 1360 aa20.38■□□□□ 0.85
GNL3-201ENST00000394799 GRIN2BQ13224 1484 aa20.37■□□□□ 0.85
GNL3-201ENST00000394799 ADAMTS12P58397 1594 aa20.3■□□□□ 0.84
GNL3-201ENST00000394799 CEP162Q5TB80 1403 aa20.28■□□□□ 0.84
GNL3-201ENST00000394799 SNAPC4Q5SXM2 1469 aa20.27■□□□□ 0.84
GNL3-201ENST00000394799 FHAD1B1AJZ9 1412 aa20.26■□□□□ 0.83
GNL3-201ENST00000394799 MAGI1Q96QZ7 1491 aaPredicted RBP20.22■□□□□ 0.83
GNL3-201ENST00000394799 CTTNBP2Q8WZ74 1663 aa20.18■□□□□ 0.82
GNL3-201ENST00000394799 RANGAP1P46060 587 aaPredicted RBP20.17■□□□□ 0.82
GNL3-201ENST00000394799 CLIP1P30622 1438 aa20.17■□□□□ 0.82
GNL3-201ENST00000394799 SYNJ2O15056 1496 aa20.14■□□□□ 0.82
GNL3-201ENST00000394799 GRIN2AQ12879 1464 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms