RNA–Protein interactions for RNA: ENST00000394563.4

STIP1P3-201, Transcript of stress induced phosphoprotein 1 pseudogene 3, humanhuman

BASIC

Gene STIP1P3, Length 1,624 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STIP1P3-201ENST00000394563 NISCHQ9Y2I1 1504 aa23.18■■□□□ 1.3
STIP1P3-201ENST00000394563 CCDC180Q9P1Z9 1646 aa20.19■□□□□ 0.82
STIP1P3-201ENST00000394563 ZCCHC6Q5VYS8 1495 aaKnown RBP19.44■□□□□ 0.7
STIP1P3-201ENST00000394563 ABCC9O60706 1549 aa19.33■□□□□ 0.68
STIP1P3-201ENST00000394563 DCAF8L2P0C7V8 631 aa19.3■□□□□ 0.68
STIP1P3-201ENST00000394563 DCAF1Q9Y4B6 1507 aa19.12■□□□□ 0.65
STIP1P3-201ENST00000394563 MYO15BQ96JP2 1530 aa18.93■□□□□ 0.62
STIP1P3-201ENST00000394563 SHROOM4Q9ULL8 1493 aa18.92■□□□□ 0.62
STIP1P3-201ENST00000394563 NACADO15069 1562 aa18.88■□□□□ 0.61
STIP1P3-201ENST00000394563 RB1CC1Q8TDY2 1594 aa18.75■□□□□ 0.59
STIP1P3-201ENST00000394563 SCRIBQ14160 1630 aa18.63■□□□□ 0.57
STIP1P3-201ENST00000394563 UNC13AQ9UPW8 1703 aa18.33■□□□□ 0.53
STIP1P3-201ENST00000394563 PABPN1Q86U42 306 aaKnown RBP eCLIP18.24■□□□□ 0.51
STIP1P3-201ENST00000394563 BICRAQ9NZM4 1560 aa18.2■□□□□ 0.5
STIP1P3-201ENST00000394563 SUPT5HO00267 1087 aaKnown RBP18.15■□□□□ 0.5
STIP1P3-201ENST00000394563 CECR2Q9BXF3 1484 aa18.06■□□□□ 0.48
STIP1P3-201ENST00000394563 RSF1Q96T23 1441 aaPredicted RBP17.96■□□□□ 0.47
STIP1P3-201ENST00000394563 MROH2BQ7Z745 1585 aa17.92■□□□□ 0.46
STIP1P3-201ENST00000394563 BAZ1AQ9NRL2 1556 aaPredicted RBP17.89■□□□□ 0.45
STIP1P3-201ENST00000394563 SMARCA4P51532 1647 aa17.82■□□□□ 0.44
STIP1P3-201ENST00000394563 WIZO95785 1651 aa17.76■□□□□ 0.43
STIP1P3-201ENST00000394563 EIF4G1Q04637 1599 aaKnown RBP17.66■□□□□ 0.42
STIP1P3-201ENST00000394563 ATAD2BQ9ULI0 1458 aa17.59■□□□□ 0.41
STIP1P3-201ENST00000394563 PEG3Q9GZU2 1588 aa17.59■□□□□ 0.41
STIP1P3-201ENST00000394563 TOP2AP11388 1531 aaKnown RBP17.55■□□□□ 0.4
STIP1P3-201ENST00000394563 SMARCA2P51531 1590 aa17.54■□□□□ 0.4
STIP1P3-201ENST00000394563 BAZ1BQ9UIG0 1483 aaKnown RBP17.48■□□□□ 0.39
STIP1P3-201ENST00000394563 NCAPD3P42695 1498 aa17.45■□□□□ 0.38
STIP1P3-201ENST00000394563 CC2D2AQ9P2K1 1620 aa17.43■□□□□ 0.38
STIP1P3-201ENST00000394563 CCDC88BA6NC98 1476 aa17.41■□□□□ 0.38
STIP1P3-201ENST00000394563 HMGXB3Q12766 1538 aa17.38■□□□□ 0.37
STIP1P3-201ENST00000394563 CHIC1Q5VXU3 224 aa17.29■□□□□ 0.36
STIP1P3-201ENST00000394563 DNAJC5BQ9UF47 199 aa17.19■□□□□ 0.34
STIP1P3-201ENST00000394563 TRIM41Q8WV44 630 aa17.05■□□□□ 0.32
STIP1P3-201ENST00000394563 CFTRP13569 1480 aa17.03■□□□□ 0.32
STIP1P3-201ENST00000394563 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.32
STIP1P3-201ENST00000394563 ABCC8Q09428 1581 aa17■□□□□ 0.31
STIP1P3-201ENST00000394563 NESP48681 1621 aa16.92■□□□□ 0.3
STIP1P3-201ENST00000394563 WRNQ14191 1432 aaPredicted RBP eCLIP16.91■□□□□ 0.3
STIP1P3-201ENST00000394563 LAMC3Q9Y6N6 1575 aa16.85■□□□□ 0.29
STIP1P3-201ENST00000394563 PRDM2Q13029 1718 aa16.85■□□□□ 0.29
STIP1P3-201ENST00000394563 FANCD2Q9BXW9 1451 aa16.82■□□□□ 0.28
STIP1P3-201ENST00000394563 SYNJ1O43426 1573 aa16.82■□□□□ 0.28
STIP1P3-201ENST00000394563 FAM9AQ8IZU1 332 aaPredicted RBP16.78■□□□□ 0.28
STIP1P3-201ENST00000394563 PDS5BQ9NTI5 1447 aa16.76■□□□□ 0.27
STIP1P3-201ENST00000394563 CUX1P39880 1505 aa16.76■□□□□ 0.27
STIP1P3-201ENST00000394563 TOP2BQ02880 1626 aa16.74■□□□□ 0.27
STIP1P3-201ENST00000394563 CEP164Q9UPV0 1460 aa16.72■□□□□ 0.27
STIP1P3-201ENST00000394563 BIVM-ERCC5R4GMW8 1640 aa16.71■□□□□ 0.27
STIP1P3-201ENST00000394563 SOGA1O94964 1423 aa16.69■□□□□ 0.26
STIP1P3-201ENST00000394563 LOC105371045A0A1W2PR82 267 aa16.66■□□□□ 0.26
STIP1P3-201ENST00000394563 KIF21AQ7Z4S6 1674 aa16.65■□□□□ 0.26
STIP1P3-201ENST00000394563 RUSC2Q8N2Y8 1516 aa16.64■□□□□ 0.25
STIP1P3-201ENST00000394563 URB2Q14146 1524 aaKnown RBP16.62■□□□□ 0.25
STIP1P3-201ENST00000394563 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
STIP1P3-201ENST00000394563 DNMBPQ6XZF7 1577 aa16.62■□□□□ 0.25
STIP1P3-201ENST00000394563 FGD5Q6ZNL6 1462 aa16.6■□□□□ 0.25
STIP1P3-201ENST00000394563 EHMT2Q96KQ7 1210 aa16.58■□□□□ 0.24
STIP1P3-201ENST00000394563 EEA1Q15075 1411 aa16.57■□□□□ 0.24
STIP1P3-201ENST00000394563 ERCC6Q03468 1493 aa16.56■□□□□ 0.24
STIP1P3-201ENST00000394563 CSRNP3Q8WYN3 585 aa16.56■□□□□ 0.24
STIP1P3-201ENST00000394563 MRC2Q9UBG0 1479 aa16.55■□□□□ 0.24
STIP1P3-201ENST00000394563 POLA1P09884 1462 aaPredicted RBP16.54■□□□□ 0.24
STIP1P3-201ENST00000394563 RAD54L2Q9Y4B4 1467 aa16.51■□□□□ 0.23
STIP1P3-201ENST00000394563 KIF27Q86VH2 1401 aa16.49■□□□□ 0.23
STIP1P3-201ENST00000394563 CUX2O14529 1486 aa16.49■□□□□ 0.23
STIP1P3-201ENST00000394563 WDR62O43379 1518 aa16.44■□□□□ 0.22
STIP1P3-201ENST00000394563 ABCA10Q8WWZ4 1543 aa16.43■□□□□ 0.22
STIP1P3-201ENST00000394563 THOC2Q8NI27 1593 aaKnown RBP16.41■□□□□ 0.22
STIP1P3-201ENST00000394563 IGF1RP08069 1367 aa16.38■□□□□ 0.21
STIP1P3-201ENST00000394563 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
STIP1P3-201ENST00000394563 UBTFP17480 764 aaKnown RBP16.36■□□□□ 0.21
STIP1P3-201ENST00000394563 GOLGA3Q08378 1498 aa16.36■□□□□ 0.21
STIP1P3-201ENST00000394563 TARBP1Q13395 1621 aaKnown RBP16.35■□□□□ 0.21
STIP1P3-201ENST00000394563 WDR97A6NE52 1622 aa16.34■□□□□ 0.21
STIP1P3-201ENST00000394563 KIF21BO75037 1637 aa16.34■□□□□ 0.21
STIP1P3-201ENST00000394563 PRXQ9BXM0 1461 aa16.34■□□□□ 0.21
STIP1P3-201ENST00000394563 RAPGEF2Q9Y4G8 1499 aa16.33■□□□□ 0.2
STIP1P3-201ENST00000394563 IFT140Q96RY7 1462 aa16.32■□□□□ 0.2
STIP1P3-201ENST00000394563 GAPVD1Q14C86 1478 aa16.3■□□□□ 0.2
STIP1P3-201ENST00000394563 CARMIL1Q5VZK9 1371 aa16.3■□□□□ 0.2
STIP1P3-201ENST00000394563 TNIKQ9UKE5 1360 aa16.3■□□□□ 0.2
STIP1P3-201ENST00000394563 AQRO60306 1485 aaKnown RBP eCLIP16.28■□□□□ 0.2
STIP1P3-201ENST00000394563 ABCA5Q8WWZ7 1642 aa16.28■□□□□ 0.2
STIP1P3-201ENST00000394563 ZNF608Q9ULD9 1512 aaPredicted RBP16.27■□□□□ 0.19
STIP1P3-201ENST00000394563 ERICH3Q5RHP9 1530 aa16.26■□□□□ 0.19
STIP1P3-201ENST00000394563 CEP162Q5TB80 1403 aa16.2■□□□□ 0.18
STIP1P3-201ENST00000394563 GRIN2BQ13224 1484 aa16.18■□□□□ 0.18
STIP1P3-201ENST00000394563 CUL7Q14999 1698 aa16.18■□□□□ 0.18
STIP1P3-201ENST00000394563 RANGAP1P46060 587 aaPredicted RBP16.17■□□□□ 0.18
STIP1P3-201ENST00000394563 PBRM1Q86U86 1689 aa16.16■□□□□ 0.18
STIP1P3-201ENST00000394563 EIF4G3O43432 1585 aaKnown RBP16.16■□□□□ 0.18
STIP1P3-201ENST00000394563 FHAD1B1AJZ9 1412 aa16.12■□□□□ 0.17
STIP1P3-201ENST00000394563 CLIP1P30622 1438 aa16.11■□□□□ 0.17
STIP1P3-201ENST00000394563 SNAPC4Q5SXM2 1469 aa16.11■□□□□ 0.17
STIP1P3-201ENST00000394563 ADAMTS12P58397 1594 aa16.1■□□□□ 0.17
STIP1P3-201ENST00000394563 MAGI1Q96QZ7 1491 aaPredicted RBP16.05■□□□□ 0.16
STIP1P3-201ENST00000394563 CHMP7Q8WUX9 453 aaPredicted RBP16.02■□□□□ 0.16
STIP1P3-201ENST00000394563 FBLN2P98095 1184 aa16.01■□□□□ 0.15
STIP1P3-201ENST00000394563 SYNJ2O15056 1496 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms