RNA–Protein interactions for RNA: ENST00000394488.2

NDST3-202, Transcript of N-deacetylase and N-sulfotransferase 3, humanhuman

TSL 1 (best)

Gene NDST3, Length 2,184 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDST3-202ENST00000394488 NISCHQ9Y2I1 1504 aa48.64■■■■■ 5.38
NDST3-202ENST00000394488 CCDC180Q9P1Z9 1646 aa42.67■■■■■ 4.42
NDST3-202ENST00000394488 ABCC9O60706 1549 aa41.29■■■■■ 4.2
NDST3-202ENST00000394488 ZCCHC6Q5VYS8 1495 aaKnown RBP40.69■■■■■ 4.11
NDST3-202ENST00000394488 DCAF8L2P0C7V8 631 aa40.65■■■■■ 4.1
NDST3-202ENST00000394488 DCAF1Q9Y4B6 1507 aa40.07■■■■■ 4
NDST3-202ENST00000394488 NACADO15069 1562 aa39.93■■■■□ 3.98
NDST3-202ENST00000394488 MYO15BQ96JP2 1530 aa39.85■■■■□ 3.97
NDST3-202ENST00000394488 RB1CC1Q8TDY2 1594 aa39.81■■■■□ 3.96
NDST3-202ENST00000394488 SHROOM4Q9ULL8 1493 aa39.4■■■■□ 3.9
NDST3-202ENST00000394488 SCRIBQ14160 1630 aa39.34■■■■□ 3.89
NDST3-202ENST00000394488 UNC13AQ9UPW8 1703 aa39.12■■■■□ 3.85
NDST3-202ENST00000394488 PABPN1Q86U42 306 aaKnown RBP eCLIP38.85■■■■□ 3.81
NDST3-202ENST00000394488 BICRAQ9NZM4 1560 aa38.73■■■■□ 3.79
NDST3-202ENST00000394488 CECR2Q9BXF3 1484 aa37.99■■■■□ 3.67
NDST3-202ENST00000394488 MROH2BQ7Z745 1585 aa37.64■■■■□ 3.62
NDST3-202ENST00000394488 EIF4G1Q04637 1599 aaKnown RBP37.61■■■■□ 3.61
NDST3-202ENST00000394488 BAZ1AQ9NRL2 1556 aaPredicted RBP37.57■■■■□ 3.61
NDST3-202ENST00000394488 SMARCA4P51532 1647 aa37.57■■■■□ 3.6
NDST3-202ENST00000394488 RSF1Q96T23 1441 aaPredicted RBP37.49■■■■□ 3.59
NDST3-202ENST00000394488 SUPT5HO00267 1087 aaKnown RBP37.47■■■■□ 3.59
NDST3-202ENST00000394488 WIZO95785 1651 aa37.31■■■■□ 3.56
NDST3-202ENST00000394488 CC2D2AQ9P2K1 1620 aa37.28■■■■□ 3.56
NDST3-202ENST00000394488 DNAJC5BQ9UF47 199 aa37.22■■■■□ 3.55
NDST3-202ENST00000394488 ATAD2BQ9ULI0 1458 aa37.15■■■■□ 3.54
NDST3-202ENST00000394488 PEG3Q9GZU2 1588 aa37.05■■■■□ 3.52
NDST3-202ENST00000394488 SMARCA2P51531 1590 aa37.02■■■■□ 3.52
NDST3-202ENST00000394488 NCAPD3P42695 1498 aa36.9■■■■□ 3.5
NDST3-202ENST00000394488 BAZ1BQ9UIG0 1483 aaKnown RBP36.89■■■■□ 3.5
NDST3-202ENST00000394488 TOP2AP11388 1531 aaKnown RBP36.77■■■■□ 3.48
NDST3-202ENST00000394488 HMGXB3Q12766 1538 aa36.76■■■■□ 3.47
NDST3-202ENST00000394488 CCDC88BA6NC98 1476 aa36.46■■■■□ 3.43
NDST3-202ENST00000394488 NESP48681 1621 aa36.04■■■■□ 3.36
NDST3-202ENST00000394488 CADPSQ9ULU8 1353 aa35.94■■■■□ 3.34
NDST3-202ENST00000394488 CFTRP13569 1480 aa35.9■■■■□ 3.34
NDST3-202ENST00000394488 LAMC3Q9Y6N6 1575 aa35.76■■■■□ 3.32
NDST3-202ENST00000394488 PRDM2Q13029 1718 aa35.62■■■■□ 3.29
NDST3-202ENST00000394488 FANCD2Q9BXW9 1451 aa35.58■■■■□ 3.29
NDST3-202ENST00000394488 ABCC8Q09428 1581 aa35.55■■■■□ 3.28
NDST3-202ENST00000394488 KIF21AQ7Z4S6 1674 aa35.53■■■■□ 3.28
NDST3-202ENST00000394488 PDS5BQ9NTI5 1447 aa35.51■■■■□ 3.28
NDST3-202ENST00000394488 ERCC6Q03468 1493 aa35.4■■■■□ 3.26
NDST3-202ENST00000394488 CEP164Q9UPV0 1460 aa35.4■■■■□ 3.26
NDST3-202ENST00000394488 CHIC1Q5VXU3 224 aa35.37■■■■□ 3.25
NDST3-202ENST00000394488 WRNQ14191 1432 aaPredicted RBP eCLIP35.28■■■■□ 3.24
NDST3-202ENST00000394488 SYNJ1O43426 1573 aa35.23■■■■□ 3.23
NDST3-202ENST00000394488 CUX1P39880 1505 aa35.22■■■■□ 3.23
NDST3-202ENST00000394488 URB2Q14146 1524 aaKnown RBP35.21■■■■□ 3.23
NDST3-202ENST00000394488 TRIM41Q8WV44 630 aa35.17■■■■□ 3.22
NDST3-202ENST00000394488 MRC2Q9UBG0 1479 aa35.14■■■■□ 3.22
NDST3-202ENST00000394488 TOPBP1Q92547 1522 aa35.1■■■■□ 3.21
NDST3-202ENST00000394488 THOC2Q8NI27 1593 aaKnown RBP35.1■■■■□ 3.21
NDST3-202ENST00000394488 DNMBPQ6XZF7 1577 aa35.06■■■■□ 3.2
NDST3-202ENST00000394488 TOP2BQ02880 1626 aa35.05■■■■□ 3.2
NDST3-202ENST00000394488 BIVM-ERCC5R4GMW8 1640 aa35.01■■■■□ 3.2
NDST3-202ENST00000394488 WDR62O43379 1518 aa34.97■■■■□ 3.19
NDST3-202ENST00000394488 FGD5Q6ZNL6 1462 aa34.95■■■■□ 3.19
NDST3-202ENST00000394488 POLA1P09884 1462 aaPredicted RBP34.9■■■■□ 3.18
NDST3-202ENST00000394488 RAD54L2Q9Y4B4 1467 aa34.85■■■■□ 3.17
NDST3-202ENST00000394488 CUX2O14529 1486 aa34.78■■■■□ 3.16
NDST3-202ENST00000394488 SOGA1O94964 1423 aa34.75■■■■□ 3.15
NDST3-202ENST00000394488 FAM9AQ8IZU1 332 aaPredicted RBP34.67■■■■□ 3.14
NDST3-202ENST00000394488 RUSC2Q8N2Y8 1516 aa34.66■■■■□ 3.14
NDST3-202ENST00000394488 TARBP1Q13395 1621 aaKnown RBP34.64■■■■□ 3.14
NDST3-202ENST00000394488 TDRD9Q8NDG6 1382 aaKnown RBP34.58■■■■□ 3.13
NDST3-202ENST00000394488 ZNF608Q9ULD9 1512 aaPredicted RBP34.57■■■■□ 3.12
NDST3-202ENST00000394488 IFT140Q96RY7 1462 aa34.55■■■■□ 3.12
NDST3-202ENST00000394488 ABCA10Q8WWZ4 1543 aa34.55■■■■□ 3.12
NDST3-202ENST00000394488 WDR97A6NE52 1622 aa34.53■■■■□ 3.12
NDST3-202ENST00000394488 AQRO60306 1485 aaKnown RBP eCLIP34.49■■■■□ 3.11
NDST3-202ENST00000394488 KIF27Q86VH2 1401 aa34.41■■■■□ 3.1
NDST3-202ENST00000394488 EIF4G3O43432 1585 aaKnown RBP34.36■■■■□ 3.09
NDST3-202ENST00000394488 ABCA5Q8WWZ7 1642 aa34.35■■■■□ 3.09
NDST3-202ENST00000394488 EHMT2Q96KQ7 1210 aa34.35■■■■□ 3.09
NDST3-202ENST00000394488 GAPVD1Q14C86 1478 aa34.35■■■■□ 3.09
NDST3-202ENST00000394488 CSRNP3Q8WYN3 585 aa34.26■■■■□ 3.07
NDST3-202ENST00000394488 IGF1RP08069 1367 aa34.25■■■■□ 3.07
NDST3-202ENST00000394488 PBRM1Q86U86 1689 aa34.21■■■■□ 3.07
NDST3-202ENST00000394488 EEA1Q15075 1411 aa34.2■■■■□ 3.07
NDST3-202ENST00000394488 GRIN2BQ13224 1484 aa34.16■■■■□ 3.06
NDST3-202ENST00000394488 LOC105371045A0A1W2PR82 267 aa34.11■■■■□ 3.05
NDST3-202ENST00000394488 SNAPC4Q5SXM2 1469 aa34.1■■■■□ 3.05
NDST3-202ENST00000394488 ERICH3Q5RHP9 1530 aa34.1■■■■□ 3.05
NDST3-202ENST00000394488 CARMIL1Q5VZK9 1371 aa34.05■■■■□ 3.04
NDST3-202ENST00000394488 PRXQ9BXM0 1461 aa34.01■■■■□ 3.03
NDST3-202ENST00000394488 RAPGEF2Q9Y4G8 1499 aa34■■■■□ 3.03
NDST3-202ENST00000394488 FBLN2P98095 1184 aa33.98■■■■□ 3.03
NDST3-202ENST00000394488 ADAMTS12P58397 1594 aa33.97■■■■□ 3.03
NDST3-202ENST00000394488 CUL7Q14999 1698 aa33.95■■■■□ 3.03
NDST3-202ENST00000394488 MAGI1Q96QZ7 1491 aaPredicted RBP33.93■■■■□ 3.02
NDST3-202ENST00000394488 FHAD1B1AJZ9 1412 aa33.91■■■■□ 3.02
NDST3-202ENST00000394488 KIF21BO75037 1637 aa33.89■■■■□ 3.02
NDST3-202ENST00000394488 CHMP7Q8WUX9 453 aaPredicted RBP33.87■■■■□ 3.01
NDST3-202ENST00000394488 SYNJ2O15056 1496 aa33.83■■■■□ 3.01
NDST3-202ENST00000394488 UBTFP17480 764 aaKnown RBP33.82■■■■□ 3.01
NDST3-202ENST00000394488 GOLGA3Q08378 1498 aa33.81■■■■□ 3
NDST3-202ENST00000394488 CHD1O14646 1710 aa33.79■■■■□ 3
NDST3-202ENST00000394488 GRIN2AQ12879 1464 aa33.77■■■■□ 3
NDST3-202ENST00000394488 RANGAP1P46060 587 aaPredicted RBP33.7■■■□□ 2.99
NDST3-202ENST00000394488 CEP170Q5SW79 1584 aa33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms