RNA–Protein interactions for RNA: ENST00000394285.3

PDCL-202, Transcript of phosducin like, humanhuman

TSL 3

Gene PDCL, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL-202ENST00000394285 NISCHQ9Y2I1 1504 aa26.74■■□□□ 1.87
PDCL-202ENST00000394285 CCDC180Q9P1Z9 1646 aa23.69■■□□□ 1.38
PDCL-202ENST00000394285 ABCC9O60706 1549 aa23.33■■□□□ 1.32
PDCL-202ENST00000394285 DCAF8L2P0C7V8 631 aa22.42■■□□□ 1.18
PDCL-202ENST00000394285 RB1CC1Q8TDY2 1594 aa22.42■■□□□ 1.18
PDCL-202ENST00000394285 NACADO15069 1562 aa22.41■■□□□ 1.18
PDCL-202ENST00000394285 MYO15BQ96JP2 1530 aa22.33■■□□□ 1.17
PDCL-202ENST00000394285 ZCCHC6Q5VYS8 1495 aaKnown RBP22.22■■□□□ 1.15
PDCL-202ENST00000394285 DCAF1Q9Y4B6 1507 aa22.16■■□□□ 1.14
PDCL-202ENST00000394285 PABPN1Q86U42 306 aaKnown RBP eCLIP21.85■■□□□ 1.09
PDCL-202ENST00000394285 BICRAQ9NZM4 1560 aa21.7■■□□□ 1.06
PDCL-202ENST00000394285 UNC13AQ9UPW8 1703 aa21.66■■□□□ 1.06
PDCL-202ENST00000394285 SHROOM4Q9ULL8 1493 aa21.59■■□□□ 1.05
PDCL-202ENST00000394285 DNAJC5BQ9UF47 199 aa21.59■■□□□ 1.05
PDCL-202ENST00000394285 SCRIBQ14160 1630 aa21.56■■□□□ 1.04
PDCL-202ENST00000394285 EIF4G1Q04637 1599 aaKnown RBP21.14■□□□□ 0.98
PDCL-202ENST00000394285 CC2D2AQ9P2K1 1620 aa21.05■□□□□ 0.96
PDCL-202ENST00000394285 CECR2Q9BXF3 1484 aa21.01■□□□□ 0.95
PDCL-202ENST00000394285 NCAPD3P42695 1498 aa20.75■□□□□ 0.91
PDCL-202ENST00000394285 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
PDCL-202ENST00000394285 ATAD2BQ9ULI0 1458 aa20.69■□□□□ 0.9
PDCL-202ENST00000394285 SMARCA4P51532 1647 aa20.67■□□□□ 0.9
PDCL-202ENST00000394285 SMARCA2P51531 1590 aa20.63■□□□□ 0.89
PDCL-202ENST00000394285 MROH2BQ7Z745 1585 aa20.56■□□□□ 0.88
PDCL-202ENST00000394285 PEG3Q9GZU2 1588 aa20.55■□□□□ 0.88
PDCL-202ENST00000394285 HMGXB3Q12766 1538 aa20.54■□□□□ 0.88
PDCL-202ENST00000394285 BAZ1BQ9UIG0 1483 aaKnown RBP20.48■□□□□ 0.87
PDCL-202ENST00000394285 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
PDCL-202ENST00000394285 WIZO95785 1651 aa20.23■□□□□ 0.83
PDCL-202ENST00000394285 CADPSQ9ULU8 1353 aa20.15■□□□□ 0.82
PDCL-202ENST00000394285 NESP48681 1621 aa20.13■□□□□ 0.81
PDCL-202ENST00000394285 ERCC6Q03468 1493 aa20.13■□□□□ 0.81
PDCL-202ENST00000394285 LAMC3Q9Y6N6 1575 aa20.12■□□□□ 0.81
PDCL-202ENST00000394285 TOP2AP11388 1531 aaKnown RBP20.1■□□□□ 0.81
PDCL-202ENST00000394285 PDS5BQ9NTI5 1447 aa20.08■□□□□ 0.8
PDCL-202ENST00000394285 CUX2O14529 1486 aa20■□□□□ 0.79
PDCL-202ENST00000394285 CFTRP13569 1480 aa19.97■□□□□ 0.79
PDCL-202ENST00000394285 CCDC88BA6NC98 1476 aa19.92■□□□□ 0.78
PDCL-202ENST00000394285 FANCD2Q9BXW9 1451 aa19.84■□□□□ 0.77
PDCL-202ENST00000394285 CEP164Q9UPV0 1460 aa19.8■□□□□ 0.76
PDCL-202ENST00000394285 MRC2Q9UBG0 1479 aa19.79■□□□□ 0.76
PDCL-202ENST00000394285 THOC2Q8NI27 1593 aaKnown RBP19.79■□□□□ 0.76
PDCL-202ENST00000394285 SUPT5HO00267 1087 aaKnown RBP19.77■□□□□ 0.76
PDCL-202ENST00000394285 KIF21AQ7Z4S6 1674 aa19.75■□□□□ 0.75
PDCL-202ENST00000394285 WDR62O43379 1518 aa19.71■□□□□ 0.75
PDCL-202ENST00000394285 URB2Q14146 1524 aaKnown RBP19.61■□□□□ 0.73
PDCL-202ENST00000394285 DNAJC5Q9H3Z4 198 aa19.59■□□□□ 0.73
PDCL-202ENST00000394285 ABCC8Q09428 1581 aa19.58■□□□□ 0.73
PDCL-202ENST00000394285 PRDM2Q13029 1718 aa19.53■□□□□ 0.72
PDCL-202ENST00000394285 TOPBP1Q92547 1522 aa19.49■□□□□ 0.71
PDCL-202ENST00000394285 IFT140Q96RY7 1462 aa19.44■□□□□ 0.7
PDCL-202ENST00000394285 DNMBPQ6XZF7 1577 aa19.43■□□□□ 0.7
PDCL-202ENST00000394285 POLA1P09884 1462 aaPredicted RBP19.32■□□□□ 0.68
PDCL-202ENST00000394285 SOGA1O94964 1423 aa19.32■□□□□ 0.68
PDCL-202ENST00000394285 ZNF608Q9ULD9 1512 aaPredicted RBP19.29■□□□□ 0.68
PDCL-202ENST00000394285 CUX1P39880 1505 aa19.27■□□□□ 0.68
PDCL-202ENST00000394285 OSCARQ8IYS5 282 aa19.26■□□□□ 0.67
PDCL-202ENST00000394285 FGD5Q6ZNL6 1462 aa19.24■□□□□ 0.67
PDCL-202ENST00000394285 TARBP1Q13395 1621 aaKnown RBP19.24■□□□□ 0.67
PDCL-202ENST00000394285 RAD54L2Q9Y4B4 1467 aa19.22■□□□□ 0.67
PDCL-202ENST00000394285 AQRO60306 1485 aaKnown RBP eCLIP19.22■□□□□ 0.67
PDCL-202ENST00000394285 WRNQ14191 1432 aaPredicted RBP eCLIP19.2■□□□□ 0.66
PDCL-202ENST00000394285 TDRD9Q8NDG6 1382 aaKnown RBP19.19■□□□□ 0.66
PDCL-202ENST00000394285 WDR97A6NE52 1622 aa19.13■□□□□ 0.65
PDCL-202ENST00000394285 EIF4G3O43432 1585 aaKnown RBP19.12■□□□□ 0.65
PDCL-202ENST00000394285 ABCA10Q8WWZ4 1543 aa19.1■□□□□ 0.65
PDCL-202ENST00000394285 TOP2BQ02880 1626 aa19.08■□□□□ 0.65
PDCL-202ENST00000394285 GRIN2BQ13224 1484 aa19.07■□□□□ 0.64
PDCL-202ENST00000394285 GAPVD1Q14C86 1478 aa19.04■□□□□ 0.64
PDCL-202ENST00000394285 BIVM-ERCC5R4GMW8 1640 aa19.03■□□□□ 0.64
PDCL-202ENST00000394285 FBLN2P98095 1184 aa19.03■□□□□ 0.64
PDCL-202ENST00000394285 SYNJ1O43426 1573 aa19.02■□□□□ 0.64
PDCL-202ENST00000394285 CHMP7Q8WUX9 453 aaPredicted RBP19.02■□□□□ 0.64
PDCL-202ENST00000394285 MAGI1Q96QZ7 1491 aaPredicted RBP19.02■□□□□ 0.63
PDCL-202ENST00000394285 SNAPC4Q5SXM2 1469 aa18.98■□□□□ 0.63
PDCL-202ENST00000394285 SYNJ2O15056 1496 aa18.94■□□□□ 0.62
PDCL-202ENST00000394285 ABCA5Q8WWZ7 1642 aa18.92■□□□□ 0.62
PDCL-202ENST00000394285 FHAD1B1AJZ9 1412 aa18.86■□□□□ 0.61
PDCL-202ENST00000394285 ERICH3Q5RHP9 1530 aa18.85■□□□□ 0.61
PDCL-202ENST00000394285 KIF27Q86VH2 1401 aa18.83■□□□□ 0.6
PDCL-202ENST00000394285 CHD1O14646 1710 aa18.82■□□□□ 0.6
PDCL-202ENST00000394285 IGF1RP08069 1367 aa18.81■□□□□ 0.6
PDCL-202ENST00000394285 PBRM1Q86U86 1689 aa18.79■□□□□ 0.6
PDCL-202ENST00000394285 TRIM41Q8WV44 630 aa18.79■□□□□ 0.6
PDCL-202ENST00000394285 ARHGEF11O15085 1522 aa18.79■□□□□ 0.6
PDCL-202ENST00000394285 GRIN2AQ12879 1464 aa18.78■□□□□ 0.6
PDCL-202ENST00000394285 CLASP1Q7Z460 1538 aa18.76■□□□□ 0.59
PDCL-202ENST00000394285 NUP160Q12769 1436 aa18.74■□□□□ 0.59
PDCL-202ENST00000394285 ADAMTS12P58397 1594 aa18.74■□□□□ 0.59
PDCL-202ENST00000394285 RIMBP3CA6NJZ7 1639 aa18.72■□□□□ 0.59
PDCL-202ENST00000394285 RIMBP3BA6NNM3 1639 aa18.72■□□□□ 0.59
PDCL-202ENST00000394285 RIMBP3Q9UFD9 1639 aa18.72■□□□□ 0.59
PDCL-202ENST00000394285 CYB5RLQ6IPT4 315 aa18.72■□□□□ 0.59
PDCL-202ENST00000394285 CARMIL1Q5VZK9 1371 aa18.67■□□□□ 0.58
PDCL-202ENST00000394285 JPH4Q96JJ6 628 aa18.64■□□□□ 0.57
PDCL-202ENST00000394285 ARAP1Q96P48 1450 aa18.63■□□□□ 0.57
PDCL-202ENST00000394285 CEP170Q5SW79 1584 aa18.63■□□□□ 0.57
PDCL-202ENST00000394285 CUL7Q14999 1698 aa18.58■□□□□ 0.57
PDCL-202ENST00000394285 KIAA0586Q9BVV6 1533 aa18.58■□□□□ 0.56
PDCL-202ENST00000394285 RUSC2Q8N2Y8 1516 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms