RNA–Protein interactions for RNA: ENST00000394035.6

C7orf43-202, Transcript of chromosome 7 open reading frame 43, humanhuman

TSL 1 (best)

Gene C7orf43, Length 1,255 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C7orf43-202ENST00000394035 NISCHQ9Y2I1 1504 aa36.12■■■■□ 3.37
C7orf43-202ENST00000394035 CCDC180Q9P1Z9 1646 aa32.06■■■□□ 2.72
C7orf43-202ENST00000394035 ABCC9O60706 1549 aa31.56■■■□□ 2.64
C7orf43-202ENST00000394035 DCAF8L2P0C7V8 631 aa30.22■■■□□ 2.43
C7orf43-202ENST00000394035 RB1CC1Q8TDY2 1594 aa30.22■■■□□ 2.43
C7orf43-202ENST00000394035 NACADO15069 1562 aa30.17■■■□□ 2.42
C7orf43-202ENST00000394035 ZCCHC6Q5VYS8 1495 aaKnown RBP30.1■■■□□ 2.41
C7orf43-202ENST00000394035 MYO15BQ96JP2 1530 aa29.95■■■□□ 2.38
C7orf43-202ENST00000394035 DCAF1Q9Y4B6 1507 aa29.82■■■□□ 2.36
C7orf43-202ENST00000394035 UNC13AQ9UPW8 1703 aa29.56■■■□□ 2.32
C7orf43-202ENST00000394035 PABPN1Q86U42 306 aaKnown RBP eCLIP29.51■■■□□ 2.31
C7orf43-202ENST00000394035 BICRAQ9NZM4 1560 aa29.4■■■□□ 2.3
C7orf43-202ENST00000394035 SCRIBQ14160 1630 aa29.37■■■□□ 2.29
C7orf43-202ENST00000394035 DNAJC5BQ9UF47 199 aa29.08■■■□□ 2.25
C7orf43-202ENST00000394035 SHROOM4Q9ULL8 1493 aa28.96■■■□□ 2.23
C7orf43-202ENST00000394035 EIF4G1Q04637 1599 aaKnown RBP28.6■■■□□ 2.17
C7orf43-202ENST00000394035 CC2D2AQ9P2K1 1620 aa28.51■■■□□ 2.15
C7orf43-202ENST00000394035 CECR2Q9BXF3 1484 aa28.33■■■□□ 2.13
C7orf43-202ENST00000394035 SMARCA4P51532 1647 aa28.04■■■□□ 2.08
C7orf43-202ENST00000394035 BAZ1AQ9NRL2 1556 aaPredicted RBP27.96■■■□□ 2.07
C7orf43-202ENST00000394035 ATAD2BQ9ULI0 1458 aa27.92■■■□□ 2.06
C7orf43-202ENST00000394035 MROH2BQ7Z745 1585 aa27.89■■■□□ 2.05
C7orf43-202ENST00000394035 NCAPD3P42695 1498 aa27.88■■■□□ 2.05
C7orf43-202ENST00000394035 SMARCA2P51531 1590 aa27.82■■■□□ 2.04
C7orf43-202ENST00000394035 PEG3Q9GZU2 1588 aa27.73■■■□□ 2.03
C7orf43-202ENST00000394035 HMGXB3Q12766 1538 aa27.72■■■□□ 2.03
C7orf43-202ENST00000394035 BAZ1BQ9UIG0 1483 aaKnown RBP27.66■■■□□ 2.02
C7orf43-202ENST00000394035 WIZO95785 1651 aa27.56■■■□□ 2
C7orf43-202ENST00000394035 RSF1Q96T23 1441 aaPredicted RBP27.53■■■□□ 2
C7orf43-202ENST00000394035 NESP48681 1621 aa27.32■■□□□ 1.96
C7orf43-202ENST00000394035 TOP2AP11388 1531 aaKnown RBP27.25■■□□□ 1.95
C7orf43-202ENST00000394035 ERCC6Q03468 1493 aa27.15■■□□□ 1.94
C7orf43-202ENST00000394035 LAMC3Q9Y6N6 1575 aa27.11■■□□□ 1.93
C7orf43-202ENST00000394035 CADPSQ9ULU8 1353 aa27.08■■□□□ 1.93
C7orf43-202ENST00000394035 CCDC88BA6NC98 1476 aa26.95■■□□□ 1.91
C7orf43-202ENST00000394035 PDS5BQ9NTI5 1447 aa26.94■■□□□ 1.9
C7orf43-202ENST00000394035 KIF21AQ7Z4S6 1674 aa26.92■■□□□ 1.9
C7orf43-202ENST00000394035 CFTRP13569 1480 aa26.9■■□□□ 1.9
C7orf43-202ENST00000394035 THOC2Q8NI27 1593 aaKnown RBP26.88■■□□□ 1.89
C7orf43-202ENST00000394035 DNAJC5Q9H3Z4 198 aa26.87■■□□□ 1.89
C7orf43-202ENST00000394035 CUX2O14529 1486 aa26.86■■□□□ 1.89
C7orf43-202ENST00000394035 SUPT5HO00267 1087 aaKnown RBP26.81■■□□□ 1.88
C7orf43-202ENST00000394035 FANCD2Q9BXW9 1451 aa26.78■■□□□ 1.88
C7orf43-202ENST00000394035 CEP164Q9UPV0 1460 aa26.73■■□□□ 1.87
C7orf43-202ENST00000394035 MRC2Q9UBG0 1479 aa26.72■■□□□ 1.87
C7orf43-202ENST00000394035 WDR62O43379 1518 aa26.64■■□□□ 1.85
C7orf43-202ENST00000394035 PRDM2Q13029 1718 aa26.6■■□□□ 1.85
C7orf43-202ENST00000394035 URB2Q14146 1524 aaKnown RBP26.55■■□□□ 1.84
C7orf43-202ENST00000394035 AEBP2Q6ZN18 517 aaPredicted RBP26.45■■□□□ 1.82
C7orf43-202ENST00000394035 TOPBP1Q92547 1522 aa26.35■■□□□ 1.81
C7orf43-202ENST00000394035 DNMBPQ6XZF7 1577 aa26.29■■□□□ 1.8
C7orf43-202ENST00000394035 ABCC8Q09428 1581 aa26.23■■□□□ 1.79
C7orf43-202ENST00000394035 IFT140Q96RY7 1462 aa26.17■■□□□ 1.78
C7orf43-202ENST00000394035 CUX1P39880 1505 aa26.15■■□□□ 1.78
C7orf43-202ENST00000394035 POLA1P09884 1462 aaPredicted RBP26.14■■□□□ 1.78
C7orf43-202ENST00000394035 ZNF608Q9ULD9 1512 aaPredicted RBP26.14■■□□□ 1.77
C7orf43-202ENST00000394035 FGD5Q6ZNL6 1462 aa26.07■■□□□ 1.76
C7orf43-202ENST00000394035 RAD54L2Q9Y4B4 1467 aa26.07■■□□□ 1.76
C7orf43-202ENST00000394035 TARBP1Q13395 1621 aaKnown RBP26.06■■□□□ 1.76
C7orf43-202ENST00000394035 SOGA1O94964 1423 aa25.99■■□□□ 1.75
C7orf43-202ENST00000394035 EIF4G3O43432 1585 aaKnown RBP25.98■■□□□ 1.75
C7orf43-202ENST00000394035 AQRO60306 1485 aaKnown RBP eCLIP25.97■■□□□ 1.757e-8■■■■□ 23.2
C7orf43-202ENST00000394035 WRNQ14191 1432 aaPredicted RBP eCLIP25.93■■□□□ 1.741e-6■■■■■ 58.5
C7orf43-202ENST00000394035 SYNJ1O43426 1573 aa25.91■■□□□ 1.74
C7orf43-202ENST00000394035 TDRD9Q8NDG6 1382 aaKnown RBP25.91■■□□□ 1.74
C7orf43-202ENST00000394035 TOP2BQ02880 1626 aa25.86■■□□□ 1.73
C7orf43-202ENST00000394035 BIVM-ERCC5R4GMW8 1640 aa25.85■■□□□ 1.73
C7orf43-202ENST00000394035 WDR97A6NE52 1622 aa25.83■■□□□ 1.73
C7orf43-202ENST00000394035 ABCA10Q8WWZ4 1543 aa25.78■■□□□ 1.72
C7orf43-202ENST00000394035 OSCARQ8IYS5 282 aa25.72■■□□□ 1.71
C7orf43-202ENST00000394035 SNAPC4Q5SXM2 1469 aa25.72■■□□□ 1.71
C7orf43-202ENST00000394035 ABCA5Q8WWZ7 1642 aa25.7■■□□□ 1.7
C7orf43-202ENST00000394035 GRIN2BQ13224 1484 aa25.69■■□□□ 1.7
C7orf43-202ENST00000394035 GAPVD1Q14C86 1478 aa25.69■■□□□ 1.7
C7orf43-202ENST00000394035 CHD1O14646 1710 aa25.63■■□□□ 1.69
C7orf43-202ENST00000394035 FBLN2P98095 1184 aa25.63■■□□□ 1.69
C7orf43-202ENST00000394035 PBRM1Q86U86 1689 aa25.62■■□□□ 1.69
C7orf43-202ENST00000394035 MAGI1Q96QZ7 1491 aaPredicted RBP25.6■■□□□ 1.69
C7orf43-202ENST00000394035 SYNJ2O15056 1496 aa25.53■■□□□ 1.68
C7orf43-202ENST00000394035 CHMP7Q8WUX9 453 aaPredicted RBP25.51■■□□□ 1.67
C7orf43-202ENST00000394035 ADAMTS12P58397 1594 aa25.47■■□□□ 1.67
C7orf43-202ENST00000394035 ERICH3Q5RHP9 1530 aa25.43■■□□□ 1.66
C7orf43-202ENST00000394035 CLASP1Q7Z460 1538 aa25.39■■□□□ 1.66
C7orf43-202ENST00000394035 FHAD1B1AJZ9 1412 aa25.38■■□□□ 1.65
C7orf43-202ENST00000394035 GRIN2AQ12879 1464 aa25.38■■□□□ 1.65
C7orf43-202ENST00000394035 ARHGEF11O15085 1522 aa25.37■■□□□ 1.65
C7orf43-202ENST00000394035 RIMBP3CA6NJZ7 1639 aa25.37■■□□□ 1.65
C7orf43-202ENST00000394035 RIMBP3BA6NNM3 1639 aa25.37■■□□□ 1.65
C7orf43-202ENST00000394035 RIMBP3Q9UFD9 1639 aa25.37■■□□□ 1.65
C7orf43-202ENST00000394035 KIF27Q86VH2 1401 aa25.37■■□□□ 1.65
C7orf43-202ENST00000394035 TRIM41Q8WV44 630 aa25.35■■□□□ 1.65
C7orf43-202ENST00000394035 IGF1RP08069 1367 aa25.31■■□□□ 1.64
C7orf43-202ENST00000394035 CEP170Q5SW79 1584 aa25.29■■□□□ 1.64
C7orf43-202ENST00000394035 NUP160Q12769 1436 aa25.28■■□□□ 1.64
C7orf43-202ENST00000394035 RUSC2Q8N2Y8 1516 aa25.24■■□□□ 1.63
C7orf43-202ENST00000394035 ARAP1Q96P48 1450 aa25.2■■□□□ 1.62
C7orf43-202ENST00000394035 CUL7Q14999 1698 aa25.17■■□□□ 1.62
C7orf43-202ENST00000394035 CARMIL1Q5VZK9 1371 aa25.14■■□□□ 1.61
C7orf43-202ENST00000394035 CYB5RLQ6IPT4 315 aa25.13■■□□□ 1.61
C7orf43-202ENST00000394035 ERCC6L2Q5T890 1561 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms