RNA–Protein interactions for RNA: ENST00000393164.6

ATP2B1-203, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2B1, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-203ENST00000393164 NISCHQ9Y2I1 1504 aa8.17□□□□□ -1.1
ATP2B1-203ENST00000393164 CCDC180Q9P1Z9 1646 aa7.2□□□□□ -1.26
ATP2B1-203ENST00000393164 ABCC9O60706 1549 aa6.91□□□□□ -1.3
ATP2B1-203ENST00000393164 ZCCHC6Q5VYS8 1495 aaKnown RBP6.83□□□□□ -1.32
ATP2B1-203ENST00000393164 DCAF8L2P0C7V8 631 aa6.82□□□□□ -1.32
ATP2B1-203ENST00000393164 DCAF1Q9Y4B6 1507 aa6.79□□□□□ -1.32
ATP2B1-203ENST00000393164 MYO15BQ96JP2 1530 aa6.77□□□□□ -1.32
ATP2B1-203ENST00000393164 NACADO15069 1562 aa6.76□□□□□ -1.33
ATP2B1-203ENST00000393164 RB1CC1Q8TDY2 1594 aa6.73□□□□□ -1.33
ATP2B1-203ENST00000393164 SCRIBQ14160 1630 aa6.57□□□□□ -1.36
ATP2B1-203ENST00000393164 SHROOM4Q9ULL8 1493 aa6.54□□□□□ -1.36
ATP2B1-203ENST00000393164 PABPN1Q86U42 306 aaKnown RBP eCLIP6.48□□□□□ -1.37
ATP2B1-203ENST00000393164 UNC13AQ9UPW8 1703 aa6.48□□□□□ -1.37
ATP2B1-203ENST00000393164 BICRAQ9NZM4 1560 aa6.45□□□□□ -1.38
ATP2B1-203ENST00000393164 BAZ1AQ9NRL2 1556 aaPredicted RBP6.35□□□□□ -1.39
ATP2B1-203ENST00000393164 CECR2Q9BXF3 1484 aa6.32□□□□□ -1.4
ATP2B1-203ENST00000393164 DNAJC5BQ9UF47 199 aa6.32□□□□□ -1.4
ATP2B1-203ENST00000393164 EIF4G1Q04637 1599 aaKnown RBP6.31□□□□□ -1.4
ATP2B1-203ENST00000393164 SMARCA4P51532 1647 aa6.3□□□□□ -1.4
ATP2B1-203ENST00000393164 RSF1Q96T23 1441 aaPredicted RBP6.28□□□□□ -1.4
ATP2B1-203ENST00000393164 MROH2BQ7Z745 1585 aa6.28□□□□□ -1.4
ATP2B1-203ENST00000393164 DNAJC5Q9H3Z4 198 aa6.28□□□□□ -1.4
ATP2B1-203ENST00000393164 SMARCA2P51531 1590 aa6.27□□□□□ -1.41
ATP2B1-203ENST00000393164 SUPT5HO00267 1087 aaKnown RBP6.26□□□□□ -1.41
ATP2B1-203ENST00000393164 PEG3Q9GZU2 1588 aa6.24□□□□□ -1.41
ATP2B1-203ENST00000393164 ATAD2BQ9ULI0 1458 aa6.24□□□□□ -1.41
ATP2B1-203ENST00000393164 CC2D2AQ9P2K1 1620 aa6.24□□□□□ -1.41
ATP2B1-203ENST00000393164 NCAPD3P42695 1498 aa6.23□□□□□ -1.41
ATP2B1-203ENST00000393164 BAZ1BQ9UIG0 1483 aaKnown RBP6.22□□□□□ -1.41
ATP2B1-203ENST00000393164 HMGXB3Q12766 1538 aa6.21□□□□□ -1.42
ATP2B1-203ENST00000393164 WIZO95785 1651 aa6.2□□□□□ -1.42
ATP2B1-203ENST00000393164 TOP2AP11388 1531 aaKnown RBP6.19□□□□□ -1.42
ATP2B1-203ENST00000393164 CCDC88BA6NC98 1476 aa6.1□□□□□ -1.43
ATP2B1-203ENST00000393164 CADPSQ9ULU8 1353 aa6.07□□□□□ -1.44
ATP2B1-203ENST00000393164 CFTRP13569 1480 aa6.05□□□□□ -1.44
ATP2B1-203ENST00000393164 LAMC3Q9Y6N6 1575 aa6.04□□□□□ -1.44
ATP2B1-203ENST00000393164 PDS5BQ9NTI5 1447 aa6.03□□□□□ -1.44
ATP2B1-203ENST00000393164 ERCC6Q03468 1493 aa5.99□□□□□ -1.45
ATP2B1-203ENST00000393164 NESP48681 1621 aa5.99□□□□□ -1.45
ATP2B1-203ENST00000393164 FANCD2Q9BXW9 1451 aa5.99□□□□□ -1.45
ATP2B1-203ENST00000393164 CEP164Q9UPV0 1460 aa5.98□□□□□ -1.45
ATP2B1-203ENST00000393164 PRDM2Q13029 1718 aa5.97□□□□□ -1.45
ATP2B1-203ENST00000393164 ABCC8Q09428 1581 aa5.96□□□□□ -1.46
ATP2B1-203ENST00000393164 WRNQ14191 1432 aaPredicted RBP eCLIP5.95□□□□□ -1.46
ATP2B1-203ENST00000393164 TRIM41Q8WV44 630 aa5.94□□□□□ -1.46
ATP2B1-203ENST00000393164 MRC2Q9UBG0 1479 aa5.94□□□□□ -1.46
ATP2B1-203ENST00000393164 CHIC1Q5VXU3 224 aa5.91□□□□□ -1.46
ATP2B1-203ENST00000393164 KIF21AQ7Z4S6 1674 aa5.91□□□□□ -1.46
ATP2B1-203ENST00000393164 DNMBPQ6XZF7 1577 aa5.91□□□□□ -1.46
ATP2B1-203ENST00000393164 TOPBP1Q92547 1522 aa5.89□□□□□ -1.47
ATP2B1-203ENST00000393164 WDR62O43379 1518 aa5.89□□□□□ -1.47
ATP2B1-203ENST00000393164 TOP2BQ02880 1626 aa5.89□□□□□ -1.47
ATP2B1-203ENST00000393164 CUX1P39880 1505 aa5.88□□□□□ -1.47
ATP2B1-203ENST00000393164 URB2Q14146 1524 aaKnown RBP5.88□□□□□ -1.47
ATP2B1-203ENST00000393164 CUX2O14529 1486 aa5.88□□□□□ -1.47
ATP2B1-203ENST00000393164 BIVM-ERCC5R4GMW8 1640 aa5.87□□□□□ -1.47
ATP2B1-203ENST00000393164 THOC2Q8NI27 1593 aaKnown RBP5.87□□□□□ -1.47
ATP2B1-203ENST00000393164 SYNJ1O43426 1573 aa5.87□□□□□ -1.47
ATP2B1-203ENST00000393164 FGD5Q6ZNL6 1462 aa5.87□□□□□ -1.47
ATP2B1-203ENST00000393164 SOGA1O94964 1423 aa5.86□□□□□ -1.47
ATP2B1-203ENST00000393164 POLA1P09884 1462 aaPredicted RBP5.85□□□□□ -1.47
ATP2B1-203ENST00000393164 IFT140Q96RY7 1462 aa5.85□□□□□ -1.47
ATP2B1-203ENST00000393164 EEA1Q15075 1411 aa5.83□□□□□ -1.48
ATP2B1-203ENST00000393164 KIF27Q86VH2 1401 aa5.83□□□□□ -1.48
ATP2B1-203ENST00000393164 ABCA10Q8WWZ4 1543 aa5.82□□□□□ -1.48
ATP2B1-203ENST00000393164 WDR97A6NE52 1622 aa5.81□□□□□ -1.48
ATP2B1-203ENST00000393164 RAD54L2Q9Y4B4 1467 aa5.81□□□□□ -1.48
ATP2B1-203ENST00000393164 TDRD9Q8NDG6 1382 aaKnown RBP5.79□□□□□ -1.48
ATP2B1-203ENST00000393164 TARBP1Q13395 1621 aaKnown RBP5.79□□□□□ -1.48
ATP2B1-203ENST00000393164 GAPVD1Q14C86 1478 aa5.79□□□□□ -1.48
ATP2B1-203ENST00000393164 CSRNP3Q8WYN3 585 aa5.78□□□□□ -1.48
ATP2B1-203ENST00000393164 GRIN2BQ13224 1484 aa5.78□□□□□ -1.48
ATP2B1-203ENST00000393164 FAM9AQ8IZU1 332 aaPredicted RBP5.77□□□□□ -1.49
ATP2B1-203ENST00000393164 AQRO60306 1485 aaKnown RBP eCLIP5.77□□□□□ -1.496e-7■■□□□ 11.9
ATP2B1-203ENST00000393164 ERICH3Q5RHP9 1530 aa5.76□□□□□ -1.49
ATP2B1-203ENST00000393164 ZNF608Q9ULD9 1512 aaPredicted RBP5.76□□□□□ -1.49
ATP2B1-203ENST00000393164 ABCA5Q8WWZ7 1642 aa5.76□□□□□ -1.49
ATP2B1-203ENST00000393164 IGF1RP08069 1367 aa5.75□□□□□ -1.49
ATP2B1-203ENST00000393164 EIF4G3O43432 1585 aaKnown RBP5.75□□□□□ -1.49
ATP2B1-203ENST00000393164 MAGI1Q96QZ7 1491 aaPredicted RBP5.75□□□□□ -1.49
ATP2B1-203ENST00000393164 CARMIL1Q5VZK9 1371 aa5.75□□□□□ -1.49
ATP2B1-203ENST00000393164 FHAD1B1AJZ9 1412 aa5.74□□□□□ -1.49
ATP2B1-203ENST00000393164 CHMP7Q8WUX9 453 aaPredicted RBP5.74□□□□□ -1.49
ATP2B1-203ENST00000393164 CUL7Q14999 1698 aa5.74□□□□□ -1.49
ATP2B1-203ENST00000393164 RUSC2Q8N2Y8 1516 aa5.73□□□□□ -1.49
ATP2B1-203ENST00000393164 SNAPC4Q5SXM2 1469 aa5.72□□□□□ -1.49
ATP2B1-203ENST00000393164 RAPGEF2Q9Y4G8 1499 aa5.72□□□□□ -1.49
ATP2B1-203ENST00000393164 FBLN2P98095 1184 aa5.72□□□□□ -1.49
ATP2B1-203ENST00000393164 PBRM1Q86U86 1689 aa5.72□□□□□ -1.49
ATP2B1-203ENST00000393164 SYNJ2O15056 1496 aa5.72□□□□□ -1.49
ATP2B1-203ENST00000393164 PRXQ9BXM0 1461 aa5.72□□□□□ -1.49
ATP2B1-203ENST00000393164 GOLGA3Q08378 1498 aa5.71□□□□□ -1.49
ATP2B1-203ENST00000393164 UBTFP17480 764 aaKnown RBP5.71□□□□□ -1.5
ATP2B1-203ENST00000393164 KIF21BO75037 1637 aa5.7□□□□□ -1.5
ATP2B1-203ENST00000393164 ADAMTS12P58397 1594 aa5.7□□□□□ -1.5
ATP2B1-203ENST00000393164 GRIN2AQ12879 1464 aa5.69□□□□□ -1.5
ATP2B1-203ENST00000393164 OSCARQ8IYS5 282 aa5.67□□□□□ -1.5
ATP2B1-203ENST00000393164 EHMT2Q96KQ7 1210 aa5.67□□□□□ -1.5
ATP2B1-203ENST00000393164 TNIKQ9UKE5 1360 aa5.67□□□□□ -1.5
ATP2B1-203ENST00000393164 KIAA0586Q9BVV6 1533 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms