RNA–Protein interactions for RNA: ENST00000392710.8

PRKAR1A-202, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 2

Gene PRKAR1A, Length 3,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-202ENST00000392710 NISCHQ9Y2I1 1504 aa16.28■□□□□ 0.2
PRKAR1A-202ENST00000392710 CCDC180Q9P1Z9 1646 aa14.27□□□□□ -0.13
PRKAR1A-202ENST00000392710 ZCCHC6Q5VYS8 1495 aaKnown RBP13.74□□□□□ -0.21
PRKAR1A-202ENST00000392710 DCAF1Q9Y4B6 1507 aa13.61□□□□□ -0.23
PRKAR1A-202ENST00000392710 MYO15BQ96JP2 1530 aa13.43□□□□□ -0.26
PRKAR1A-202ENST00000392710 NACADO15069 1562 aa13.17□□□□□ -0.3
PRKAR1A-202ENST00000392710 ABCC9O60706 1549 aa13.06□□□□□ -0.32
PRKAR1A-202ENST00000392710 SHROOM4Q9ULL8 1493 aa13□□□□□ -0.33
PRKAR1A-202ENST00000392710 RB1CC1Q8TDY2 1594 aa12.98□□□□□ -0.33
PRKAR1A-202ENST00000392710 SCRIBQ14160 1630 aa12.91□□□□□ -0.34
PRKAR1A-202ENST00000392710 DCAF8L2P0C7V8 631 aa12.9□□□□□ -0.34
PRKAR1A-202ENST00000392710 UNC13AQ9UPW8 1703 aa12.85□□□□□ -0.35
PRKAR1A-202ENST00000392710 BICRAQ9NZM4 1560 aa12.68□□□□□ -0.38
PRKAR1A-202ENST00000392710 RSF1Q96T23 1441 aaPredicted RBP12.62□□□□□ -0.39
PRKAR1A-202ENST00000392710 CECR2Q9BXF3 1484 aa12.56□□□□□ -0.4
PRKAR1A-202ENST00000392710 BAZ1AQ9NRL2 1556 aaPredicted RBP12.54□□□□□ -0.4
PRKAR1A-202ENST00000392710 MROH2BQ7Z745 1585 aa12.54□□□□□ -0.4
PRKAR1A-202ENST00000392710 SUPT5HO00267 1087 aaKnown RBP12.52□□□□□ -0.41
PRKAR1A-202ENST00000392710 SMARCA4P51532 1647 aa12.5□□□□□ -0.41
PRKAR1A-202ENST00000392710 PEG3Q9GZU2 1588 aa12.47□□□□□ -0.41
PRKAR1A-202ENST00000392710 WIZO95785 1651 aa12.45□□□□□ -0.42
PRKAR1A-202ENST00000392710 TOP2AP11388 1531 aaKnown RBP12.37□□□□□ -0.43
PRKAR1A-202ENST00000392710 EIF4G1Q04637 1599 aaKnown RBP12.35□□□□□ -0.43
PRKAR1A-202ENST00000392710 SMARCA2P51531 1590 aa12.26□□□□□ -0.45
PRKAR1A-202ENST00000392710 CHIC1Q5VXU3 224 aa12.24□□□□□ -0.45
PRKAR1A-202ENST00000392710 PABPN1Q86U42 306 aaKnown RBP eCLIP12.24□□□□□ -0.45
PRKAR1A-202ENST00000392710 ATAD2BQ9ULI0 1458 aa12.22□□□□□ -0.45
PRKAR1A-202ENST00000392710 HMGXB3Q12766 1538 aa12.18□□□□□ -0.46
PRKAR1A-202ENST00000392710 CCDC88BA6NC98 1476 aa12.17□□□□□ -0.46
PRKAR1A-202ENST00000392710 NCAPD3P42695 1498 aa12.14□□□□□ -0.47
PRKAR1A-202ENST00000392710 BAZ1BQ9UIG0 1483 aaKnown RBP12.09□□□□□ -0.47
PRKAR1A-202ENST00000392710 PRDM2Q13029 1718 aa11.98□□□□□ -0.49
PRKAR1A-202ENST00000392710 CC2D2AQ9P2K1 1620 aa11.97□□□□□ -0.49
PRKAR1A-202ENST00000392710 ABCC8Q09428 1581 aa11.91□□□□□ -0.5
PRKAR1A-202ENST00000392710 CFTRP13569 1480 aa11.89□□□□□ -0.51
PRKAR1A-202ENST00000392710 BIVM-ERCC5R4GMW8 1640 aa11.88□□□□□ -0.51
PRKAR1A-202ENST00000392710 SYNJ1O43426 1573 aa11.85□□□□□ -0.51
PRKAR1A-202ENST00000392710 TOP2BQ02880 1626 aa11.84□□□□□ -0.51
PRKAR1A-202ENST00000392710 TRIM41Q8WV44 630 aa11.84□□□□□ -0.51
PRKAR1A-202ENST00000392710 WRNQ14191 1432 aaPredicted RBP eCLIP11.81□□□□□ -0.52
PRKAR1A-202ENST00000392710 EEA1Q15075 1411 aa11.77□□□□□ -0.52
PRKAR1A-202ENST00000392710 CADPSQ9ULU8 1353 aa11.74□□□□□ -0.53
PRKAR1A-202ENST00000392710 CUX1P39880 1505 aa11.73□□□□□ -0.53
PRKAR1A-202ENST00000392710 LAMC3Q9Y6N6 1575 aa11.72□□□□□ -0.53
PRKAR1A-202ENST00000392710 KIF21BO75037 1637 aa11.69□□□□□ -0.54
PRKAR1A-202ENST00000392710 SOGA1O94964 1423 aa11.69□□□□□ -0.54
PRKAR1A-202ENST00000392710 LOC105371045A0A1W2PR82 267 aa11.66□□□□□ -0.54
PRKAR1A-202ENST00000392710 RUSC2Q8N2Y8 1516 aa11.65□□□□□ -0.54
PRKAR1A-202ENST00000392710 DNMBPQ6XZF7 1577 aa11.61□□□□□ -0.55
PRKAR1A-202ENST00000392710 FANCD2Q9BXW9 1451 aa11.61□□□□□ -0.55
PRKAR1A-202ENST00000392710 WDR97A6NE52 1622 aa11.58□□□□□ -0.56
PRKAR1A-202ENST00000392710 ERICH3Q5RHP9 1530 aa11.58□□□□□ -0.56
PRKAR1A-202ENST00000392710 NESP48681 1621 aa11.57□□□□□ -0.56
PRKAR1A-202ENST00000392710 TNIKQ9UKE5 1360 aa11.56□□□□□ -0.56
PRKAR1A-202ENST00000392710 CEP164Q9UPV0 1460 aa11.56□□□□□ -0.56
PRKAR1A-202ENST00000392710 PRXQ9BXM0 1461 aa11.56□□□□□ -0.56
PRKAR1A-202ENST00000392710 GOLGA3Q08378 1498 aa11.56□□□□□ -0.56
PRKAR1A-202ENST00000392710 CSRNP3Q8WYN3 585 aa11.54□□□□□ -0.56
PRKAR1A-202ENST00000392710 KIF21AQ7Z4S6 1674 aa11.54□□□□□ -0.56
PRKAR1A-202ENST00000392710 TOPBP1Q92547 1522 aa11.54□□□□□ -0.56
PRKAR1A-202ENST00000392710 FGD5Q6ZNL6 1462 aa11.52□□□□□ -0.56
PRKAR1A-202ENST00000392710 URB2Q14146 1524 aaKnown RBP11.51□□□□□ -0.57
PRKAR1A-202ENST00000392710 ABCA10Q8WWZ4 1543 aa11.51□□□□□ -0.57
PRKAR1A-202ENST00000392710 PDS5BQ9NTI5 1447 aa11.49□□□□□ -0.57
PRKAR1A-202ENST00000392710 KIF27Q86VH2 1401 aa11.49□□□□□ -0.57
PRKAR1A-202ENST00000392710 FAM9AQ8IZU1 332 aaPredicted RBP11.49□□□□□ -0.57
PRKAR1A-202ENST00000392710 DNAJC5BQ9UF47 199 aa11.48□□□□□ -0.57
PRKAR1A-202ENST00000392710 POLA1P09884 1462 aaPredicted RBP11.48□□□□□ -0.57
PRKAR1A-202ENST00000392710 RAPGEF2Q9Y4G8 1499 aa11.47□□□□□ -0.57
PRKAR1A-202ENST00000392710 ABCA5Q8WWZ7 1642 aa11.46□□□□□ -0.57
PRKAR1A-202ENST00000392710 CEP162Q5TB80 1403 aa11.46□□□□□ -0.57
PRKAR1A-202ENST00000392710 TARBP1Q13395 1621 aaKnown RBP11.45□□□□□ -0.58
PRKAR1A-202ENST00000392710 CUL7Q14999 1698 aa11.42□□□□□ -0.58
PRKAR1A-202ENST00000392710 WDR62O43379 1518 aa11.42□□□□□ -0.58
PRKAR1A-202ENST00000392710 IGF1RP08069 1367 aa11.42□□□□□ -0.58
PRKAR1A-202ENST00000392710 CUX2O14529 1486 aa11.4□□□□□ -0.58
PRKAR1A-202ENST00000392710 MRC2Q9UBG0 1479 aa11.39□□□□□ -0.59
PRKAR1A-202ENST00000392710 THOC2Q8NI27 1593 aaKnown RBP11.38□□□□□ -0.59
PRKAR1A-202ENST00000392710 RAD54L2Q9Y4B4 1467 aa11.37□□□□□ -0.59
PRKAR1A-202ENST00000392710 PBRM1Q86U86 1689 aa11.33□□□□□ -0.6
PRKAR1A-202ENST00000392710 CTTNBP2Q8WZ74 1663 aa11.32□□□□□ -0.6
PRKAR1A-202ENST00000392710 CLIP1P30622 1438 aa11.32□□□□□ -0.6
PRKAR1A-202ENST00000392710 ARAP1Q96P48 1450 aa11.31□□□□□ -0.6
PRKAR1A-202ENST00000392710 VPS8Q8N3P4 1428 aa11.3□□□□□ -0.6
PRKAR1A-202ENST00000392710 CARMIL1Q5VZK9 1371 aa11.3□□□□□ -0.6
PRKAR1A-202ENST00000392710 TRIM26Q12899 539 aaPredicted RBP11.28□□□□□ -0.6
PRKAR1A-202ENST00000392710 GAPVD1Q14C86 1478 aa11.28□□□□□ -0.6
PRKAR1A-202ENST00000392710 IFT140Q96RY7 1462 aa11.28□□□□□ -0.6
PRKAR1A-202ENST00000392710 ARHGAP35Q9NRY4 1499 aa11.27□□□□□ -0.61
PRKAR1A-202ENST00000392710 ADAMTS12P58397 1594 aa11.26□□□□□ -0.61
PRKAR1A-202ENST00000392710 UBTFP17480 764 aaKnown RBP11.25□□□□□ -0.61
PRKAR1A-202ENST00000392710 EFCAB5A4FU69 1503 aa11.24□□□□□ -0.61
PRKAR1A-202ENST00000392710 SAMD9Q5K651 1589 aa11.24□□□□□ -0.61
PRKAR1A-202ENST00000392710 MAP3K1Q13233 1512 aa11.23□□□□□ -0.61
PRKAR1A-202ENST00000392710 EIF4G3O43432 1585 aaKnown RBP11.21□□□□□ -0.62
PRKAR1A-202ENST00000392710 EHMT2Q96KQ7 1210 aa11.2□□□□□ -0.62
PRKAR1A-202ENST00000392710 GRIN2BQ13224 1484 aa11.19□□□□□ -0.62
PRKAR1A-202ENST00000392710 FHAD1B1AJZ9 1412 aa11.18□□□□□ -0.62
PRKAR1A-202ENST00000392710 TDRD9Q8NDG6 1382 aaKnown RBP11.18□□□□□ -0.62
PRKAR1A-202ENST00000392710 PCGF6Q9BYE7 350 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms