RNA–Protein interactions for RNA: ENST00000392153.7

HKR1-202, Transcript of HKR1, GLI-Kruppel zinc finger family member, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HKR1, Length 2,772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1-202ENST00000392153 NISCHQ9Y2I1 1504 aa19.51■□□□□ 0.71
HKR1-202ENST00000392153 CCDC180Q9P1Z9 1646 aa17.13■□□□□ 0.33
HKR1-202ENST00000392153 ZCCHC6Q5VYS8 1495 aaKnown RBP16.4■□□□□ 0.22
HKR1-202ENST00000392153 DCAF1Q9Y4B6 1507 aa16.23■□□□□ 0.19
HKR1-202ENST00000392153 MYO15BQ96JP2 1530 aa16.07■□□□□ 0.16
HKR1-202ENST00000392153 ABCC9O60706 1549 aa16.03■□□□□ 0.16
HKR1-202ENST00000392153 NACADO15069 1562 aa15.93■□□□□ 0.14
HKR1-202ENST00000392153 DCAF8L2P0C7V8 631 aa15.91■□□□□ 0.14
HKR1-202ENST00000392153 RB1CC1Q8TDY2 1594 aa15.77■□□□□ 0.12
HKR1-202ENST00000392153 SHROOM4Q9ULL8 1493 aa15.7■□□□□ 0.1
HKR1-202ENST00000392153 SCRIBQ14160 1630 aa15.61■□□□□ 0.09
HKR1-202ENST00000392153 UNC13AQ9UPW8 1703 aa15.47■□□□□ 0.07
HKR1-202ENST00000392153 BICRAQ9NZM4 1560 aa15.27■□□□□ 0.03
HKR1-202ENST00000392153 BAZ1AQ9NRL2 1556 aaPredicted RBP15.09■□□□□ 0.01
HKR1-202ENST00000392153 SUPT5HO00267 1087 aaKnown RBP15.09■□□□□ 0.01
HKR1-202ENST00000392153 CECR2Q9BXF3 1484 aa15.08■□□□□ 0.01
HKR1-202ENST00000392153 RSF1Q96T23 1441 aaPredicted RBP15.08■□□□□ 0.01
HKR1-202ENST00000392153 PABPN1Q86U42 306 aaKnown RBP eCLIP15.04■□□□□ -0
HKR1-202ENST00000392153 MROH2BQ7Z745 1585 aa15.03■□□□□ -0
HKR1-202ENST00000392153 SMARCA4P51532 1647 aa15.02■□□□□ -0
HKR1-202ENST00000392153 WIZO95785 1651 aa14.92□□□□□ -0.02
HKR1-202ENST00000392153 PEG3Q9GZU2 1588 aa14.89□□□□□ -0.03
HKR1-202ENST00000392153 TOP2AP11388 1531 aaKnown RBP14.82□□□□□ -0.04
HKR1-202ENST00000392153 EIF4G1Q04637 1599 aaKnown RBP14.8□□□□□ -0.04
HKR1-202ENST00000392153 SMARCA2P51531 1590 aa14.8□□□□□ -0.04
HKR1-202ENST00000392153 ATAD2BQ9ULI0 1458 aa14.75□□□□□ -0.05
HKR1-202ENST00000392153 HMGXB3Q12766 1538 aa14.68□□□□□ -0.06
HKR1-202ENST00000392153 BAZ1BQ9UIG0 1483 aaKnown RBP14.66□□□□□ -0.06
HKR1-202ENST00000392153 NCAPD3P42695 1498 aa14.66□□□□□ -0.06
HKR1-202ENST00000392153 CCDC88BA6NC98 1476 aa14.6□□□□□ -0.07
HKR1-202ENST00000392153 CC2D2AQ9P2K1 1620 aa14.58□□□□□ -0.08
HKR1-202ENST00000392153 CHIC1Q5VXU3 224 aa14.51□□□□□ -0.09
HKR1-202ENST00000392153 PRDM2Q13029 1718 aa14.35□□□□□ -0.11
HKR1-202ENST00000392153 CFTRP13569 1480 aa14.31□□□□□ -0.12
HKR1-202ENST00000392153 TRIM41Q8WV44 630 aa14.26□□□□□ -0.13
HKR1-202ENST00000392153 ABCC8Q09428 1581 aa14.25□□□□□ -0.13
HKR1-202ENST00000392153 CADPSQ9ULU8 1353 aa14.24□□□□□ -0.13
HKR1-202ENST00000392153 WRNQ14191 1432 aaPredicted RBP eCLIP14.2□□□□□ -0.14
HKR1-202ENST00000392153 LAMC3Q9Y6N6 1575 aa14.2□□□□□ -0.14
HKR1-202ENST00000392153 BIVM-ERCC5R4GMW8 1640 aa14.16□□□□□ -0.14
HKR1-202ENST00000392153 TOP2BQ02880 1626 aa14.15□□□□□ -0.14
HKR1-202ENST00000392153 SYNJ1O43426 1573 aa14.15□□□□□ -0.14
HKR1-202ENST00000392153 DNAJC5BQ9UF47 199 aa14.1□□□□□ -0.15
HKR1-202ENST00000392153 FANCD2Q9BXW9 1451 aa14.08□□□□□ -0.16
HKR1-202ENST00000392153 CUX1P39880 1505 aa14.07□□□□□ -0.16
HKR1-202ENST00000392153 NESP48681 1621 aa14.06□□□□□ -0.16
HKR1-202ENST00000392153 EEA1Q15075 1411 aa14.06□□□□□ -0.16
HKR1-202ENST00000392153 PDS5BQ9NTI5 1447 aa14.04□□□□□ -0.16
HKR1-202ENST00000392153 CEP164Q9UPV0 1460 aa14.01□□□□□ -0.17
HKR1-202ENST00000392153 DNMBPQ6XZF7 1577 aa14□□□□□ -0.17
HKR1-202ENST00000392153 KIF21AQ7Z4S6 1674 aa13.98□□□□□ -0.17
HKR1-202ENST00000392153 SOGA1O94964 1423 aa13.96□□□□□ -0.17
HKR1-202ENST00000392153 TOPBP1Q92547 1522 aa13.94□□□□□ -0.18
HKR1-202ENST00000392153 FGD5Q6ZNL6 1462 aa13.91□□□□□ -0.18
HKR1-202ENST00000392153 URB2Q14146 1524 aaKnown RBP13.91□□□□□ -0.18
HKR1-202ENST00000392153 FAM9AQ8IZU1 332 aaPredicted RBP13.9□□□□□ -0.18
HKR1-202ENST00000392153 RUSC2Q8N2Y8 1516 aa13.9□□□□□ -0.18
HKR1-202ENST00000392153 CSRNP3Q8WYN3 585 aa13.88□□□□□ -0.19
HKR1-202ENST00000392153 KIF21BO75037 1637 aa13.88□□□□□ -0.19
HKR1-202ENST00000392153 MRC2Q9UBG0 1479 aa13.87□□□□□ -0.19
HKR1-202ENST00000392153 LOC105371045A0A1W2PR82 267 aa13.87□□□□□ -0.19
HKR1-202ENST00000392153 KIF27Q86VH2 1401 aa13.86□□□□□ -0.19
HKR1-202ENST00000392153 POLA1P09884 1462 aaPredicted RBP13.85□□□□□ -0.19
HKR1-202ENST00000392153 WDR97A6NE52 1622 aa13.84□□□□□ -0.19
HKR1-202ENST00000392153 ABCA10Q8WWZ4 1543 aa13.84□□□□□ -0.19
HKR1-202ENST00000392153 WDR62O43379 1518 aa13.83□□□□□ -0.2
HKR1-202ENST00000392153 GOLGA3Q08378 1498 aa13.81□□□□□ -0.2
HKR1-202ENST00000392153 CUX2O14529 1486 aa13.8□□□□□ -0.2
HKR1-202ENST00000392153 ERICH3Q5RHP9 1530 aa13.79□□□□□ -0.2
HKR1-202ENST00000392153 THOC2Q8NI27 1593 aaKnown RBP13.78□□□□□ -0.2
HKR1-202ENST00000392153 ERCC6Q03468 1493 aa13.78□□□□□ -0.2
HKR1-202ENST00000392153 PRXQ9BXM0 1461 aa13.77□□□□□ -0.21
HKR1-202ENST00000392153 TARBP1Q13395 1621 aaKnown RBP13.76□□□□□ -0.21
HKR1-202ENST00000392153 RAD54L2Q9Y4B4 1467 aa13.76□□□□□ -0.21
HKR1-202ENST00000392153 TNIKQ9UKE5 1360 aa13.76□□□□□ -0.21
HKR1-202ENST00000392153 ABCA5Q8WWZ7 1642 aa13.74□□□□□ -0.21
HKR1-202ENST00000392153 CUL7Q14999 1698 aa13.71□□□□□ -0.21
HKR1-202ENST00000392153 IGF1RP08069 1367 aa13.71□□□□□ -0.21
HKR1-202ENST00000392153 IFT140Q96RY7 1462 aa13.71□□□□□ -0.22
HKR1-202ENST00000392153 RAPGEF2Q9Y4G8 1499 aa13.7□□□□□ -0.22
HKR1-202ENST00000392153 GAPVD1Q14C86 1478 aa13.66□□□□□ -0.22
HKR1-202ENST00000392153 PBRM1Q86U86 1689 aa13.65□□□□□ -0.22
HKR1-202ENST00000392153 CARMIL1Q5VZK9 1371 aa13.65□□□□□ -0.22
HKR1-202ENST00000392153 CEP162Q5TB80 1403 aa13.64□□□□□ -0.23
HKR1-202ENST00000392153 UBTFP17480 764 aaKnown RBP13.64□□□□□ -0.23
HKR1-202ENST00000392153 EHMT2Q96KQ7 1210 aa13.63□□□□□ -0.23
HKR1-202ENST00000392153 TDRD9Q8NDG6 1382 aaKnown RBP13.6□□□□□ -0.23
HKR1-202ENST00000392153 GRIN2BQ13224 1484 aa13.58□□□□□ -0.24
HKR1-202ENST00000392153 EIF4G3O43432 1585 aaKnown RBP13.57□□□□□ -0.24
HKR1-202ENST00000392153 ADAMTS12P58397 1594 aa13.56□□□□□ -0.24
HKR1-202ENST00000392153 CTTNBP2Q8WZ74 1663 aa13.55□□□□□ -0.24
HKR1-202ENST00000392153 CLIP1P30622 1438 aa13.55□□□□□ -0.24
HKR1-202ENST00000392153 ZNF608Q9ULD9 1512 aaPredicted RBP13.54□□□□□ -0.24
HKR1-202ENST00000392153 AQRO60306 1485 aaKnown RBP eCLIP13.54□□□□□ -0.24
HKR1-202ENST00000392153 FHAD1B1AJZ9 1412 aa13.54□□□□□ -0.24
HKR1-202ENST00000392153 MAGI1Q96QZ7 1491 aaPredicted RBP13.5□□□□□ -0.25
HKR1-202ENST00000392153 SNAPC4Q5SXM2 1469 aa13.46□□□□□ -0.25
HKR1-202ENST00000392153 VPS8Q8N3P4 1428 aa13.46□□□□□ -0.26
HKR1-202ENST00000392153 EFCAB5A4FU69 1503 aa13.45□□□□□ -0.26
HKR1-202ENST00000392153 ARAP1Q96P48 1450 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms