RNA–Protein interactions for RNA: ENST00000392048.7

SP110-204, Transcript of SP110 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP110, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP110-204ENST00000392048 NISCHQ9Y2I1 1504 aa15.36■□□□□ 0.05
SP110-204ENST00000392048 CCDC180Q9P1Z9 1646 aa13.49□□□□□ -0.25
SP110-204ENST00000392048 ABCC9O60706 1549 aa13.03□□□□□ -0.32
SP110-204ENST00000392048 ZCCHC6Q5VYS8 1495 aaKnown RBP12.84□□□□□ -0.35
SP110-204ENST00000392048 DCAF8L2P0C7V8 631 aa12.78□□□□□ -0.36
SP110-204ENST00000392048 DCAF1Q9Y4B6 1507 aa12.71□□□□□ -0.37
SP110-204ENST00000392048 MYO15BQ96JP2 1530 aa12.68□□□□□ -0.38
SP110-204ENST00000392048 NACADO15069 1562 aa12.66□□□□□ -0.38
SP110-204ENST00000392048 RB1CC1Q8TDY2 1594 aa12.61□□□□□ -0.39
SP110-204ENST00000392048 SCRIBQ14160 1630 aa12.35□□□□□ -0.43
SP110-204ENST00000392048 SHROOM4Q9ULL8 1493 aa12.29□□□□□ -0.44
SP110-204ENST00000392048 UNC13AQ9UPW8 1703 aa12.29□□□□□ -0.44
SP110-204ENST00000392048 PABPN1Q86U42 306 aaKnown RBP eCLIP12.25□□□□□ -0.45
SP110-204ENST00000392048 BICRAQ9NZM4 1560 aa12.24□□□□□ -0.45
SP110-204ENST00000392048 CECR2Q9BXF3 1484 aa11.96□□□□□ -0.49
SP110-204ENST00000392048 EIF4G1Q04637 1599 aaKnown RBP11.89□□□□□ -0.51
SP110-204ENST00000392048 BAZ1AQ9NRL2 1556 aaPredicted RBP11.87□□□□□ -0.51
SP110-204ENST00000392048 MROH2BQ7Z745 1585 aa11.84□□□□□ -0.51
SP110-204ENST00000392048 SMARCA4P51532 1647 aa11.84□□□□□ -0.51
SP110-204ENST00000392048 RSF1Q96T23 1441 aaPredicted RBP11.81□□□□□ -0.52
SP110-204ENST00000392048 DNAJC5BQ9UF47 199 aa11.81□□□□□ -0.52
SP110-204ENST00000392048 CC2D2AQ9P2K1 1620 aa11.78□□□□□ -0.52
SP110-204ENST00000392048 ATAD2BQ9ULI0 1458 aa11.75□□□□□ -0.53
SP110-204ENST00000392048 PEG3Q9GZU2 1588 aa11.73□□□□□ -0.53
SP110-204ENST00000392048 SMARCA2P51531 1590 aa11.72□□□□□ -0.53
SP110-204ENST00000392048 NCAPD3P42695 1498 aa11.71□□□□□ -0.53
SP110-204ENST00000392048 SUPT5HO00267 1087 aaKnown RBP11.71□□□□□ -0.53
SP110-204ENST00000392048 WIZO95785 1651 aa11.71□□□□□ -0.54
SP110-204ENST00000392048 BAZ1BQ9UIG0 1483 aaKnown RBP11.65□□□□□ -0.55
SP110-204ENST00000392048 HMGXB3Q12766 1538 aa11.64□□□□□ -0.55
SP110-204ENST00000392048 TOP2AP11388 1531 aaKnown RBP11.6□□□□□ -0.55
SP110-204ENST00000392048 CCDC88BA6NC98 1476 aa11.49□□□□□ -0.57
SP110-204ENST00000392048 CADPSQ9ULU8 1353 aa11.39□□□□□ -0.59
SP110-204ENST00000392048 CFTRP13569 1480 aa11.36□□□□□ -0.59
SP110-204ENST00000392048 NESP48681 1621 aa11.35□□□□□ -0.59
SP110-204ENST00000392048 LAMC3Q9Y6N6 1575 aa11.32□□□□□ -0.6
SP110-204ENST00000392048 PDS5BQ9NTI5 1447 aa11.27□□□□□ -0.61
SP110-204ENST00000392048 FANCD2Q9BXW9 1451 aa11.24□□□□□ -0.61
SP110-204ENST00000392048 PRDM2Q13029 1718 aa11.2□□□□□ -0.62
SP110-204ENST00000392048 ERCC6Q03468 1493 aa11.19□□□□□ -0.62
SP110-204ENST00000392048 CEP164Q9UPV0 1460 aa11.19□□□□□ -0.62
SP110-204ENST00000392048 KIF21AQ7Z4S6 1674 aa11.17□□□□□ -0.62
SP110-204ENST00000392048 ABCC8Q09428 1581 aa11.13□□□□□ -0.63
SP110-204ENST00000392048 MRC2Q9UBG0 1479 aa11.12□□□□□ -0.63
SP110-204ENST00000392048 WRNQ14191 1432 aaPredicted RBP eCLIP11.12□□□□□ -0.63
SP110-204ENST00000392048 URB2Q14146 1524 aaKnown RBP11.11□□□□□ -0.63
SP110-204ENST00000392048 THOC2Q8NI27 1593 aaKnown RBP11.09□□□□□ -0.63
SP110-204ENST00000392048 CUX1P39880 1505 aa11.09□□□□□ -0.63
SP110-204ENST00000392048 CHIC1Q5VXU3 224 aa11.08□□□□□ -0.64
SP110-204ENST00000392048 TOPBP1Q92547 1522 aa11.08□□□□□ -0.64
SP110-204ENST00000392048 WDR62O43379 1518 aa11.08□□□□□ -0.64
SP110-204ENST00000392048 DNMBPQ6XZF7 1577 aa11.07□□□□□ -0.64
SP110-204ENST00000392048 SYNJ1O43426 1573 aa11.06□□□□□ -0.64
SP110-204ENST00000392048 TOP2BQ02880 1626 aa11.04□□□□□ -0.64
SP110-204ENST00000392048 TRIM41Q8WV44 630 aa11.04□□□□□ -0.64
SP110-204ENST00000392048 BIVM-ERCC5R4GMW8 1640 aa11.02□□□□□ -0.64
SP110-204ENST00000392048 FGD5Q6ZNL6 1462 aa11.02□□□□□ -0.65
SP110-204ENST00000392048 POLA1P09884 1462 aaPredicted RBP11.01□□□□□ -0.65
SP110-204ENST00000392048 CUX2O14529 1486 aa11□□□□□ -0.65
SP110-204ENST00000392048 SOGA1O94964 1423 aa10.98□□□□□ -0.65
SP110-204ENST00000392048 RAD54L2Q9Y4B4 1467 aa10.98□□□□□ -0.65
SP110-204ENST00000392048 IFT140Q96RY7 1462 aa10.96□□□□□ -0.66
SP110-204ENST00000392048 TARBP1Q13395 1621 aaKnown RBP10.93□□□□□ -0.66
SP110-204ENST00000392048 ABCA10Q8WWZ4 1543 aa10.92□□□□□ -0.66
SP110-204ENST00000392048 TDRD9Q8NDG6 1382 aaKnown RBP10.9□□□□□ -0.66
SP110-204ENST00000392048 ZNF608Q9ULD9 1512 aaPredicted RBP10.9□□□□□ -0.66
SP110-204ENST00000392048 AQRO60306 1485 aaKnown RBP eCLIP10.88□□□□□ -0.67
SP110-204ENST00000392048 WDR97A6NE52 1622 aa10.87□□□□□ -0.67
SP110-204ENST00000392048 KIF27Q86VH2 1401 aa10.86□□□□□ -0.67
SP110-204ENST00000392048 RUSC2Q8N2Y8 1516 aa10.86□□□□□ -0.67
SP110-204ENST00000392048 GAPVD1Q14C86 1478 aa10.84□□□□□ -0.67
SP110-204ENST00000392048 ABCA5Q8WWZ7 1642 aa10.82□□□□□ -0.68
SP110-204ENST00000392048 IGF1RP08069 1367 aa10.82□□□□□ -0.68
SP110-204ENST00000392048 EIF4G3O43432 1585 aaKnown RBP10.82□□□□□ -0.68
SP110-204ENST00000392048 FAM9AQ8IZU1 332 aaPredicted RBP10.82□□□□□ -0.68
SP110-204ENST00000392048 DNAJC5Q9H3Z4 198 aa10.82□□□□□ -0.68
SP110-204ENST00000392048 GRIN2BQ13224 1484 aa10.81□□□□□ -0.68
SP110-204ENST00000392048 EEA1Q15075 1411 aa10.81□□□□□ -0.68
SP110-204ENST00000392048 CSRNP3Q8WYN3 585 aa10.8□□□□□ -0.68
SP110-204ENST00000392048 ERICH3Q5RHP9 1530 aa10.78□□□□□ -0.68
SP110-204ENST00000392048 SNAPC4Q5SXM2 1469 aa10.76□□□□□ -0.69
SP110-204ENST00000392048 PBRM1Q86U86 1689 aa10.75□□□□□ -0.69
SP110-204ENST00000392048 CARMIL1Q5VZK9 1371 aa10.75□□□□□ -0.69
SP110-204ENST00000392048 MAGI1Q96QZ7 1491 aaPredicted RBP10.75□□□□□ -0.69
SP110-204ENST00000392048 FHAD1B1AJZ9 1412 aa10.73□□□□□ -0.69
SP110-204ENST00000392048 PRXQ9BXM0 1461 aa10.73□□□□□ -0.69
SP110-204ENST00000392048 CHMP7Q8WUX9 453 aaPredicted RBP10.72□□□□□ -0.69
SP110-204ENST00000392048 ADAMTS12P58397 1594 aa10.71□□□□□ -0.7
SP110-204ENST00000392048 SYNJ2O15056 1496 aa10.71□□□□□ -0.7
SP110-204ENST00000392048 CUL7Q14999 1698 aa10.7□□□□□ -0.7
SP110-204ENST00000392048 FBLN2P98095 1184 aa10.7□□□□□ -0.7
SP110-204ENST00000392048 RAPGEF2Q9Y4G8 1499 aa10.69□□□□□ -0.7
SP110-204ENST00000392048 GRIN2AQ12879 1464 aa10.67□□□□□ -0.7
SP110-204ENST00000392048 KIF21BO75037 1637 aa10.65□□□□□ -0.7
SP110-204ENST00000392048 EHMT2Q96KQ7 1210 aa10.65□□□□□ -0.7
SP110-204ENST00000392048 LOC105371045A0A1W2PR82 267 aa10.64□□□□□ -0.71
SP110-204ENST00000392048 GOLGA3Q08378 1498 aa10.63□□□□□ -0.71
SP110-204ENST00000392048 OSCARQ8IYS5 282 aa10.62□□□□□ -0.71
SP110-204ENST00000392048 CHD1O14646 1710 aa10.62□□□□□ -0.71
SP110-204ENST00000392048 NUP160Q12769 1436 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms