RNA–Protein interactions for RNA: ENST00000390868.1

RNU1-77P-201, Transcript of RNA, U1 small nuclear 77, pseudogene, humanhuman

BASIC

Gene RNU1-77P, Length 162 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-77P-201ENST00000390868 NISCHQ9Y2I1 1504 aa13.35□□□□□ -0.27
RNU1-77P-201ENST00000390868 ABCC9O60706 1549 aa11.89□□□□□ -0.51
RNU1-77P-201ENST00000390868 CCDC180Q9P1Z9 1646 aa11.88□□□□□ -0.51
RNU1-77P-201ENST00000390868 DCAF8L2P0C7V8 631 aa11.39□□□□□ -0.59
RNU1-77P-201ENST00000390868 RB1CC1Q8TDY2 1594 aa11.27□□□□□ -0.61
RNU1-77P-201ENST00000390868 NACADO15069 1562 aa11.19□□□□□ -0.62
RNU1-77P-201ENST00000390868 PABPN1Q86U42 306 aaKnown RBP eCLIP11.12□□□□□ -0.63
RNU1-77P-201ENST00000390868 UNC13AQ9UPW8 1703 aa11.09□□□□□ -0.63
RNU1-77P-201ENST00000390868 ZCCHC6Q5VYS8 1495 aaKnown RBP11.08□□□□□ -0.64
RNU1-77P-201ENST00000390868 DNAJC5BQ9UF47 199 aa11.02□□□□□ -0.65
RNU1-77P-201ENST00000390868 MYO15BQ96JP2 1530 aa10.99□□□□□ -0.65
RNU1-77P-201ENST00000390868 SCRIBQ14160 1630 aa10.98□□□□□ -0.65
RNU1-77P-201ENST00000390868 BICRAQ9NZM4 1560 aa10.96□□□□□ -0.65
RNU1-77P-201ENST00000390868 DCAF1Q9Y4B6 1507 aa10.93□□□□□ -0.66
RNU1-77P-201ENST00000390868 CC2D2AQ9P2K1 1620 aa10.69□□□□□ -0.7
RNU1-77P-201ENST00000390868 SHROOM4Q9ULL8 1493 aa10.68□□□□□ -0.7
RNU1-77P-201ENST00000390868 EIF4G1Q04637 1599 aaKnown RBP10.68□□□□□ -0.7
RNU1-77P-201ENST00000390868 CECR2Q9BXF3 1484 aa10.64□□□□□ -0.71
RNU1-77P-201ENST00000390868 SMARCA4P51532 1647 aa10.4□□□□□ -0.74
RNU1-77P-201ENST00000390868 ATAD2BQ9ULI0 1458 aa10.36□□□□□ -0.75
RNU1-77P-201ENST00000390868 MROH2BQ7Z745 1585 aa10.35□□□□□ -0.75
RNU1-77P-201ENST00000390868 BAZ1AQ9NRL2 1556 aaPredicted RBP10.34□□□□□ -0.75
RNU1-77P-201ENST00000390868 NCAPD3P42695 1498 aa10.32□□□□□ -0.76
RNU1-77P-201ENST00000390868 SMARCA2P51531 1590 aa10.31□□□□□ -0.76
RNU1-77P-201ENST00000390868 BAZ1BQ9UIG0 1483 aaKnown RBP10.3□□□□□ -0.76
RNU1-77P-201ENST00000390868 HMGXB3Q12766 1538 aa10.27□□□□□ -0.77
RNU1-77P-201ENST00000390868 NESP48681 1621 aa10.26□□□□□ -0.77
RNU1-77P-201ENST00000390868 WIZO95785 1651 aa10.26□□□□□ -0.77
RNU1-77P-201ENST00000390868 ERCC6Q03468 1493 aa10.23□□□□□ -0.77
RNU1-77P-201ENST00000390868 PEG3Q9GZU2 1588 aa10.22□□□□□ -0.77
RNU1-77P-201ENST00000390868 RSF1Q96T23 1441 aaPredicted RBP10.15□□□□□ -0.79
RNU1-77P-201ENST00000390868 KIF21AQ7Z4S6 1674 aa10.12□□□□□ -0.79
RNU1-77P-201ENST00000390868 LAMC3Q9Y6N6 1575 aa10.09□□□□□ -0.79
RNU1-77P-201ENST00000390868 TOP2AP11388 1531 aaKnown RBP10.07□□□□□ -0.8
RNU1-77P-201ENST00000390868 THOC2Q8NI27 1593 aaKnown RBP10.05□□□□□ -0.8
RNU1-77P-201ENST00000390868 CUX2O14529 1486 aa10.05□□□□□ -0.8
RNU1-77P-201ENST00000390868 CADPSQ9ULU8 1353 aa10.05□□□□□ -0.8
RNU1-77P-201ENST00000390868 PDS5BQ9NTI5 1447 aa10.03□□□□□ -0.8
RNU1-77P-201ENST00000390868 CCDC88BA6NC98 1476 aa9.98□□□□□ -0.81
RNU1-77P-201ENST00000390868 FANCD2Q9BXW9 1451 aa9.98□□□□□ -0.81
RNU1-77P-201ENST00000390868 MRC2Q9UBG0 1479 aa9.97□□□□□ -0.81
RNU1-77P-201ENST00000390868 CEP164Q9UPV0 1460 aa9.97□□□□□ -0.81
RNU1-77P-201ENST00000390868 SUPT5HO00267 1087 aaKnown RBP9.95□□□□□ -0.82
RNU1-77P-201ENST00000390868 CFTRP13569 1480 aa9.95□□□□□ -0.82
RNU1-77P-201ENST00000390868 DNAJC5Q9H3Z4 198 aa9.93□□□□□ -0.82
RNU1-77P-201ENST00000390868 WDR62O43379 1518 aa9.92□□□□□ -0.82
RNU1-77P-201ENST00000390868 URB2Q14146 1524 aaKnown RBP9.9□□□□□ -0.82
RNU1-77P-201ENST00000390868 PRDM2Q13029 1718 aa9.9□□□□□ -0.83
RNU1-77P-201ENST00000390868 TOPBP1Q92547 1522 aa9.8□□□□□ -0.84
RNU1-77P-201ENST00000390868 ZNF608Q9ULD9 1512 aaPredicted RBP9.78□□□□□ -0.84
RNU1-77P-201ENST00000390868 DNMBPQ6XZF7 1577 aa9.76□□□□□ -0.85
RNU1-77P-201ENST00000390868 IFT140Q96RY7 1462 aa9.73□□□□□ -0.85
RNU1-77P-201ENST00000390868 RAD54L2Q9Y4B4 1467 aa9.73□□□□□ -0.85
RNU1-77P-201ENST00000390868 AQRO60306 1485 aaKnown RBP eCLIP9.72□□□□□ -0.85
RNU1-77P-201ENST00000390868 EIF4G3O43432 1585 aaKnown RBP9.71□□□□□ -0.85
RNU1-77P-201ENST00000390868 TRIM41Q8WV44 630 aa9.71□□□□□ -0.86
RNU1-77P-201ENST00000390868 POLA1P09884 1462 aaPredicted RBP9.71□□□□□ -0.86
RNU1-77P-201ENST00000390868 CUX1P39880 1505 aa9.71□□□□□ -0.86
RNU1-77P-201ENST00000390868 FGD5Q6ZNL6 1462 aa9.7□□□□□ -0.86
RNU1-77P-201ENST00000390868 ABCC8Q09428 1581 aa9.7□□□□□ -0.86
RNU1-77P-201ENST00000390868 FBLN2P98095 1184 aa9.69□□□□□ -0.86
RNU1-77P-201ENST00000390868 TARBP1Q13395 1621 aaKnown RBP9.69□□□□□ -0.86
RNU1-77P-201ENST00000390868 TDRD9Q8NDG6 1382 aaKnown RBP9.68□□□□□ -0.86
RNU1-77P-201ENST00000390868 SOGA1O94964 1423 aa9.67□□□□□ -0.86
RNU1-77P-201ENST00000390868 OSCARQ8IYS5 282 aa9.67□□□□□ -0.86
RNU1-77P-201ENST00000390868 CHD1O14646 1710 aa9.65□□□□□ -0.87
RNU1-77P-201ENST00000390868 SNAPC4Q5SXM2 1469 aa9.6□□□□□ -0.87
RNU1-77P-201ENST00000390868 SYNJ1O43426 1573 aa9.6□□□□□ -0.87
RNU1-77P-201ENST00000390868 WDR97A6NE52 1622 aa9.59□□□□□ -0.87
RNU1-77P-201ENST00000390868 WRNQ14191 1432 aaPredicted RBP eCLIP9.58□□□□□ -0.88
RNU1-77P-201ENST00000390868 PBRM1Q86U86 1689 aa9.58□□□□□ -0.88
RNU1-77P-201ENST00000390868 RIMBP3CA6NJZ7 1639 aa9.57□□□□□ -0.88
RNU1-77P-201ENST00000390868 RIMBP3BA6NNM3 1639 aa9.57□□□□□ -0.88
RNU1-77P-201ENST00000390868 RIMBP3Q9UFD9 1639 aa9.57□□□□□ -0.88
RNU1-77P-201ENST00000390868 CHMP7Q8WUX9 453 aaPredicted RBP9.56□□□□□ -0.88
RNU1-77P-201ENST00000390868 GAPVD1Q14C86 1478 aa9.55□□□□□ -0.88
RNU1-77P-201ENST00000390868 TOP2BQ02880 1626 aa9.55□□□□□ -0.88
RNU1-77P-201ENST00000390868 BIVM-ERCC5R4GMW8 1640 aa9.55□□□□□ -0.88
RNU1-77P-201ENST00000390868 GRIN2BQ13224 1484 aa9.54□□□□□ -0.88
RNU1-77P-201ENST00000390868 ARHGEF11O15085 1522 aa9.54□□□□□ -0.88
RNU1-77P-201ENST00000390868 ABCA10Q8WWZ4 1543 aa9.53□□□□□ -0.88
RNU1-77P-201ENST00000390868 ABCA5Q8WWZ7 1642 aa9.53□□□□□ -0.88
RNU1-77P-201ENST00000390868 CYB5RLQ6IPT4 315 aa9.51□□□□□ -0.89
RNU1-77P-201ENST00000390868 MAGI1Q96QZ7 1491 aaPredicted RBP9.51□□□□□ -0.89
RNU1-77P-201ENST00000390868 SYNJ2O15056 1496 aa9.49□□□□□ -0.89
RNU1-77P-201ENST00000390868 ARAP1Q96P48 1450 aa9.47□□□□□ -0.89
RNU1-77P-201ENST00000390868 CLASP1Q7Z460 1538 aa9.46□□□□□ -0.89
RNU1-77P-201ENST00000390868 ADAMTS12P58397 1594 aa9.46□□□□□ -0.89
RNU1-77P-201ENST00000390868 GRIN2AQ12879 1464 aa9.44□□□□□ -0.9
RNU1-77P-201ENST00000390868 CEP170Q5SW79 1584 aa9.43□□□□□ -0.9
RNU1-77P-201ENST00000390868 ERCC6L2Q5T890 1561 aa9.42□□□□□ -0.9
RNU1-77P-201ENST00000390868 FHAD1B1AJZ9 1412 aa9.41□□□□□ -0.9
RNU1-77P-201ENST00000390868 TRHP20396 242 aaPredicted RBP9.4□□□□□ -0.9
RNU1-77P-201ENST00000390868 ERICH3Q5RHP9 1530 aa9.4□□□□□ -0.91
RNU1-77P-201ENST00000390868 NUP160Q12769 1436 aa9.37□□□□□ -0.91
RNU1-77P-201ENST00000390868 KIF27Q86VH2 1401 aa9.37□□□□□ -0.91
RNU1-77P-201ENST00000390868 TTBK1Q5TCY1 1321 aaPredicted RBP9.36□□□□□ -0.91
RNU1-77P-201ENST00000390868 RUSC2Q8N2Y8 1516 aa9.36□□□□□ -0.91
RNU1-77P-201ENST00000390868 IGF1RP08069 1367 aa9.35□□□□□ -0.91
RNU1-77P-201ENST00000390868 PRG4Q92954 1404 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms