RNA–Protein interactions for RNA: ENST00000390502.1

TRAJ35-201, Transcript of T cell receptor alpha joining 35 (non-functional), humanhuman

APPRIS P1 BASIC

Gene TRAJ35, Length 59 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ35-201ENST00000390502 NISCHQ9Y2I1 1504 aa13.51□□□□□ -0.25
TRAJ35-201ENST00000390502 ABCC9O60706 1549 aa13.27□□□□□ -0.29
TRAJ35-201ENST00000390502 DNAJC5BQ9UF47 199 aa13.22□□□□□ -0.29
TRAJ35-201ENST00000390502 DNAJC5Q9H3Z4 198 aa12.67□□□□□ -0.38
TRAJ35-201ENST00000390502 CCDC180Q9P1Z9 1646 aa12.48□□□□□ -0.41
TRAJ35-201ENST00000390502 RB1CC1Q8TDY2 1594 aa12.24□□□□□ -0.45
TRAJ35-201ENST00000390502 PABPN1Q86U42 306 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRAJ35-201ENST00000390502 UNC13AQ9UPW8 1703 aa12.04□□□□□ -0.48
TRAJ35-201ENST00000390502 CECR2Q9BXF3 1484 aa12.02□□□□□ -0.48
TRAJ35-201ENST00000390502 BICRAQ9NZM4 1560 aa12.01□□□□□ -0.49
TRAJ35-201ENST00000390502 NACADO15069 1562 aa11.97□□□□□ -0.49
TRAJ35-201ENST00000390502 CC2D2AQ9P2K1 1620 aa11.96□□□□□ -0.5
TRAJ35-201ENST00000390502 CUX2O14529 1486 aa11.75□□□□□ -0.53
TRAJ35-201ENST00000390502 TRIM41Q8WV44 630 aa11.74□□□□□ -0.53
TRAJ35-201ENST00000390502 EIF4G1Q04637 1599 aaKnown RBP11.73□□□□□ -0.53
TRAJ35-201ENST00000390502 SHROOM4Q9ULL8 1493 aa11.68□□□□□ -0.54
TRAJ35-201ENST00000390502 DCAF8L2P0C7V8 631 aa11.64□□□□□ -0.55
TRAJ35-201ENST00000390502 MYO15BQ96JP2 1530 aa11.55□□□□□ -0.56
TRAJ35-201ENST00000390502 ERCC6Q03468 1493 aa11.45□□□□□ -0.58
TRAJ35-201ENST00000390502 SCRIBQ14160 1630 aa11.32□□□□□ -0.6
TRAJ35-201ENST00000390502 THOC2Q8NI27 1593 aaKnown RBP11.25□□□□□ -0.61
TRAJ35-201ENST00000390502 AEBP2Q6ZN18 517 aaPredicted RBP11.19□□□□□ -0.62
TRAJ35-201ENST00000390502 NESP48681 1621 aa11.19□□□□□ -0.62
TRAJ35-201ENST00000390502 DCAF1Q9Y4B6 1507 aa11.11□□□□□ -0.63
TRAJ35-201ENST00000390502 BAZ1AQ9NRL2 1556 aaPredicted RBP11.08□□□□□ -0.64
TRAJ35-201ENST00000390502 NCAPD3P42695 1498 aa11.07□□□□□ -0.64
TRAJ35-201ENST00000390502 SMARCA2P51531 1590 aa11.07□□□□□ -0.64
TRAJ35-201ENST00000390502 RIMBP3CA6NJZ7 1639 aa11.06□□□□□ -0.64
TRAJ35-201ENST00000390502 RIMBP3BA6NNM3 1639 aa11.06□□□□□ -0.64
TRAJ35-201ENST00000390502 RIMBP3Q9UFD9 1639 aa11.06□□□□□ -0.64
TRAJ35-201ENST00000390502 ZCCHC6Q5VYS8 1495 aaKnown RBP11.04□□□□□ -0.64
TRAJ35-201ENST00000390502 KIF21AQ7Z4S6 1674 aa11.02□□□□□ -0.64
TRAJ35-201ENST00000390502 OSCARQ8IYS5 282 aa11.02□□□□□ -0.65
TRAJ35-201ENST00000390502 ILDR1Q86SU0 546 aaPredicted RBP10.97□□□□□ -0.65
TRAJ35-201ENST00000390502 TRHP20396 242 aaPredicted RBP10.94□□□□□ -0.66
TRAJ35-201ENST00000390502 LAMC3Q9Y6N6 1575 aa10.94□□□□□ -0.66
TRAJ35-201ENST00000390502 ATAD2BQ9ULI0 1458 aa10.93□□□□□ -0.66
TRAJ35-201ENST00000390502 ARHGEF11O15085 1522 aa10.93□□□□□ -0.66
TRAJ35-201ENST00000390502 HMGXB3Q12766 1538 aa10.92□□□□□ -0.66
TRAJ35-201ENST00000390502 WDR62O43379 1518 aa10.89□□□□□ -0.67
TRAJ35-201ENST00000390502 MRC2Q9UBG0 1479 aa10.87□□□□□ -0.67
TRAJ35-201ENST00000390502 PDS5BQ9NTI5 1447 aa10.86□□□□□ -0.67
TRAJ35-201ENST00000390502 CYB5RLQ6IPT4 315 aa10.84□□□□□ -0.67
TRAJ35-201ENST00000390502 ARAP1Q96P48 1450 aa10.78□□□□□ -0.68
TRAJ35-201ENST00000390502 BAZ1BQ9UIG0 1483 aaKnown RBP10.74□□□□□ -0.69
TRAJ35-201ENST00000390502 SMARCA4P51532 1647 aa10.72□□□□□ -0.69
TRAJ35-201ENST00000390502 CADPSQ9ULU8 1353 aa10.67□□□□□ -0.7
TRAJ35-201ENST00000390502 CEP164Q9UPV0 1460 aa10.64□□□□□ -0.71
TRAJ35-201ENST00000390502 PEG3Q9GZU2 1588 aa10.64□□□□□ -0.71
TRAJ35-201ENST00000390502 ZNF608Q9ULD9 1512 aaPredicted RBP10.58□□□□□ -0.72
TRAJ35-201ENST00000390502 URB2Q14146 1524 aaKnown RBP10.58□□□□□ -0.72
TRAJ35-201ENST00000390502 RSF1Q96T23 1441 aaPredicted RBP10.58□□□□□ -0.72
TRAJ35-201ENST00000390502 FANCD2Q9BXW9 1451 aa10.56□□□□□ -0.72
TRAJ35-201ENST00000390502 CHD1O14646 1710 aa10.55□□□□□ -0.72
TRAJ35-201ENST00000390502 KDM4FA0A1W2PPD8 638 aa10.49□□□□□ -0.73
TRAJ35-201ENST00000390502 EIF4G3O43432 1585 aaKnown RBP10.47□□□□□ -0.73
TRAJ35-201ENST00000390502 IFT140Q96RY7 1462 aa10.46□□□□□ -0.74
TRAJ35-201ENST00000390502 MROH2BQ7Z745 1585 aa10.43□□□□□ -0.74
TRAJ35-201ENST00000390502 CLASP1Q7Z460 1538 aa10.42□□□□□ -0.74
TRAJ35-201ENST00000390502 CFTRP13569 1480 aa10.41□□□□□ -0.74
TRAJ35-201ENST00000390502 ERCC6L2Q5T890 1561 aa10.38□□□□□ -0.75
TRAJ35-201ENST00000390502 KIF13AQ9H1H9 1805 aa10.36□□□□□ -0.75
TRAJ35-201ENST00000390502 FBLN2P98095 1184 aa10.36□□□□□ -0.75
TRAJ35-201ENST00000390502 FBXO41Q8TF61 875 aa10.35□□□□□ -0.75
TRAJ35-201ENST00000390502 AQRO60306 1485 aaKnown RBP eCLIP10.35□□□□□ -0.75
TRAJ35-201ENST00000390502 LMTK3Q96Q04 1460 aa10.35□□□□□ -0.75
TRAJ35-201ENST00000390502 HECW2Q9P2P5 1572 aa10.34□□□□□ -0.75
TRAJ35-201ENST00000390502 GAPVD1Q14C86 1478 aa10.33□□□□□ -0.76
TRAJ35-201ENST00000390502 TOPBP1Q92547 1522 aa10.29□□□□□ -0.76
TRAJ35-201ENST00000390502 SOCS7O14512 581 aa10.29□□□□□ -0.76
TRAJ35-201ENST00000390502 TARBP1Q13395 1621 aaKnown RBP10.29□□□□□ -0.76
TRAJ35-201ENST00000390502 SYNJ1O43426 1573 aa10.27□□□□□ -0.76
TRAJ35-201ENST00000390502 ILDR2Q71H61 639 aa10.27□□□□□ -0.77
TRAJ35-201ENST00000390502 WIZO95785 1651 aa10.25□□□□□ -0.77
TRAJ35-201ENST00000390502 PRDM2Q13029 1718 aa10.24□□□□□ -0.77
TRAJ35-201ENST00000390502 SNAPC4Q5SXM2 1469 aa10.22□□□□□ -0.77
TRAJ35-201ENST00000390502 ADGRL1O94910 1474 aa10.21□□□□□ -0.78
TRAJ35-201ENST00000390502 KDM6BO15054 1643 aa10.21□□□□□ -0.78
TRAJ35-201ENST00000390502 SYNJ2O15056 1496 aa10.18□□□□□ -0.78
TRAJ35-201ENST00000390502 DNMBPQ6XZF7 1577 aa10.18□□□□□ -0.78
TRAJ35-201ENST00000390502 ABCC8Q09428 1581 aa10.15□□□□□ -0.78
TRAJ35-201ENST00000390502 CHMP7Q8WUX9 453 aaPredicted RBP10.15□□□□□ -0.78
TRAJ35-201ENST00000390502 TDRD9Q8NDG6 1382 aaKnown RBP10.14□□□□□ -0.79
TRAJ35-201ENST00000390502 POLA1P09884 1462 aaPredicted RBP10.14□□□□□ -0.79
TRAJ35-201ENST00000390502 ABCC10Q5T3U5 1492 aa10.14□□□□□ -0.79
TRAJ35-201ENST00000390502 MAGI1Q96QZ7 1491 aaPredicted RBP10.13□□□□□ -0.79
TRAJ35-201ENST00000390502 RAD54L2Q9Y4B4 1467 aa10.12□□□□□ -0.79
TRAJ35-201ENST00000390502 FAM69CQ0P6D2 419 aa10.12□□□□□ -0.79
TRAJ35-201ENST00000390502 DIP2BQ9P265 1576 aa10.12□□□□□ -0.79
TRAJ35-201ENST00000390502 DISP3Q9P2K9 1392 aa10.1□□□□□ -0.79
TRAJ35-201ENST00000390502 WDR97A6NE52 1622 aa10.07□□□□□ -0.8
TRAJ35-201ENST00000390502 CEP170Q5SW79 1584 aa10.07□□□□□ -0.8
TRAJ35-201ENST00000390502 TSPOAP1O95153 1857 aa10.06□□□□□ -0.8
TRAJ35-201ENST00000390502 MAPKBP1O60336 1514 aa10.05□□□□□ -0.8
TRAJ35-201ENST00000390502 TOP2AP11388 1531 aaKnown RBP10.05□□□□□ -0.8
TRAJ35-201ENST00000390502 GRIN2BQ13224 1484 aa10.04□□□□□ -0.8
TRAJ35-201ENST00000390502 SOGA1O94964 1423 aa10.03□□□□□ -0.8
TRAJ35-201ENST00000390502 SHROOM2Q13796 1616 aa10.02□□□□□ -0.81
TRAJ35-201ENST00000390502 PBRM1Q86U86 1689 aa9.99□□□□□ -0.81
TRAJ35-201ENST00000390502 SPATA31D1Q6ZQQ2 1576 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms