RNA–Protein interactions for RNA: ENST00000390465.2

TRAV38-2DV8-201, Transcript of T cell receptor alpha variable 38-2/delta variable 8, humanhuman

APPRIS P1 BASIC

Gene TRAV38-2DV8, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-2DV8-201ENST00000390465 NISCHQ9Y2I1 1504 aa30.12■■■□□ 2.41
TRAV38-2DV8-201ENST00000390465 CCDC180Q9P1Z9 1646 aa26.76■■□□□ 1.87
TRAV38-2DV8-201ENST00000390465 ABCC9O60706 1549 aa25.81■■□□□ 1.72
TRAV38-2DV8-201ENST00000390465 ZCCHC6Q5VYS8 1495 aaKnown RBP25.15■■□□□ 1.62
TRAV38-2DV8-201ENST00000390465 NACADO15069 1562 aa25.07■■□□□ 1.6
TRAV38-2DV8-201ENST00000390465 MYO15BQ96JP2 1530 aa25.07■■□□□ 1.6
TRAV38-2DV8-201ENST00000390465 RB1CC1Q8TDY2 1594 aa25.02■■□□□ 1.6
TRAV38-2DV8-201ENST00000390465 DCAF1Q9Y4B6 1507 aa25.02■■□□□ 1.6
TRAV38-2DV8-201ENST00000390465 DCAF8L2P0C7V8 631 aa24.84■■□□□ 1.57
TRAV38-2DV8-201ENST00000390465 UNC13AQ9UPW8 1703 aa24.51■■□□□ 1.51
TRAV38-2DV8-201ENST00000390465 SCRIBQ14160 1630 aa24.29■■□□□ 1.48
TRAV38-2DV8-201ENST00000390465 BICRAQ9NZM4 1560 aa24.29■■□□□ 1.48
TRAV38-2DV8-201ENST00000390465 SHROOM4Q9ULL8 1493 aa24.11■■□□□ 1.45
TRAV38-2DV8-201ENST00000390465 PABPN1Q86U42 306 aaKnown RBP eCLIP24.09■■□□□ 1.45
TRAV38-2DV8-201ENST00000390465 EIF4G1Q04637 1599 aaKnown RBP23.6■■□□□ 1.37
TRAV38-2DV8-201ENST00000390465 DNAJC5BQ9UF47 199 aa23.51■■□□□ 1.35
TRAV38-2DV8-201ENST00000390465 CC2D2AQ9P2K1 1620 aa23.44■■□□□ 1.34
TRAV38-2DV8-201ENST00000390465 CECR2Q9BXF3 1484 aa23.39■■□□□ 1.34
TRAV38-2DV8-201ENST00000390465 SMARCA4P51532 1647 aa23.33■■□□□ 1.33
TRAV38-2DV8-201ENST00000390465 BAZ1AQ9NRL2 1556 aaPredicted RBP23.33■■□□□ 1.33
TRAV38-2DV8-201ENST00000390465 MROH2BQ7Z745 1585 aa23.18■■□□□ 1.3
TRAV38-2DV8-201ENST00000390465 PEG3Q9GZU2 1588 aa23.18■■□□□ 1.3
TRAV38-2DV8-201ENST00000390465 SMARCA2P51531 1590 aa23.14■■□□□ 1.29
TRAV38-2DV8-201ENST00000390465 ATAD2BQ9ULI0 1458 aa23.13■■□□□ 1.29
TRAV38-2DV8-201ENST00000390465 NCAPD3P42695 1498 aa23.12■■□□□ 1.29
TRAV38-2DV8-201ENST00000390465 HMGXB3Q12766 1538 aa23.05■■□□□ 1.28
TRAV38-2DV8-201ENST00000390465 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
TRAV38-2DV8-201ENST00000390465 WIZO95785 1651 aa22.95■■□□□ 1.26
TRAV38-2DV8-201ENST00000390465 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
TRAV38-2DV8-201ENST00000390465 TOP2AP11388 1531 aaKnown RBP22.74■■□□□ 1.23
TRAV38-2DV8-201ENST00000390465 LAMC3Q9Y6N6 1575 aa22.48■■□□□ 1.19
TRAV38-2DV8-201ENST00000390465 CCDC88BA6NC98 1476 aa22.44■■□□□ 1.18
TRAV38-2DV8-201ENST00000390465 NESP48681 1621 aa22.42■■□□□ 1.18
TRAV38-2DV8-201ENST00000390465 CADPSQ9ULU8 1353 aa22.41■■□□□ 1.18
TRAV38-2DV8-201ENST00000390465 SUPT5HO00267 1087 aaKnown RBP22.39■■□□□ 1.17
TRAV38-2DV8-201ENST00000390465 CFTRP13569 1480 aa22.35■■□□□ 1.17
TRAV38-2DV8-201ENST00000390465 PRDM2Q13029 1718 aa22.28■■□□□ 1.16
TRAV38-2DV8-201ENST00000390465 PDS5BQ9NTI5 1447 aa22.26■■□□□ 1.15
TRAV38-2DV8-201ENST00000390465 KIF21AQ7Z4S6 1674 aa22.23■■□□□ 1.15
TRAV38-2DV8-201ENST00000390465 ERCC6Q03468 1493 aa22.22■■□□□ 1.15
TRAV38-2DV8-201ENST00000390465 FANCD2Q9BXW9 1451 aa22.14■■□□□ 1.13
TRAV38-2DV8-201ENST00000390465 THOC2Q8NI27 1593 aaKnown RBP22.12■■□□□ 1.13
TRAV38-2DV8-201ENST00000390465 CEP164Q9UPV0 1460 aa22.09■■□□□ 1.13
TRAV38-2DV8-201ENST00000390465 MRC2Q9UBG0 1479 aa22.03■■□□□ 1.12
TRAV38-2DV8-201ENST00000390465 CUX2O14529 1486 aa22.02■■□□□ 1.12
TRAV38-2DV8-201ENST00000390465 WDR62O43379 1518 aa22.01■■□□□ 1.11
TRAV38-2DV8-201ENST00000390465 URB2Q14146 1524 aaKnown RBP21.92■■□□□ 1.1
TRAV38-2DV8-201ENST00000390465 ABCC8Q09428 1581 aa21.87■■□□□ 1.09
TRAV38-2DV8-201ENST00000390465 DNMBPQ6XZF7 1577 aa21.84■■□□□ 1.09
TRAV38-2DV8-201ENST00000390465 TOPBP1Q92547 1522 aa21.83■■□□□ 1.09
TRAV38-2DV8-201ENST00000390465 CUX1P39880 1505 aa21.74■■□□□ 1.07
TRAV38-2DV8-201ENST00000390465 BIVM-ERCC5R4GMW8 1640 aa21.67■■□□□ 1.06
TRAV38-2DV8-201ENST00000390465 POLA1P09884 1462 aaPredicted RBP21.65■■□□□ 1.06
TRAV38-2DV8-201ENST00000390465 WRNQ14191 1432 aaPredicted RBP eCLIP21.65■■□□□ 1.06
TRAV38-2DV8-201ENST00000390465 IFT140Q96RY7 1462 aa21.64■■□□□ 1.06
TRAV38-2DV8-201ENST00000390465 TOP2BQ02880 1626 aa21.64■■□□□ 1.05
TRAV38-2DV8-201ENST00000390465 TARBP1Q13395 1621 aaKnown RBP21.62■■□□□ 1.05
TRAV38-2DV8-201ENST00000390465 FGD5Q6ZNL6 1462 aa21.62■■□□□ 1.05
TRAV38-2DV8-201ENST00000390465 SYNJ1O43426 1573 aa21.61■■□□□ 1.05
TRAV38-2DV8-201ENST00000390465 WDR97A6NE52 1622 aa21.53■■□□□ 1.04
TRAV38-2DV8-201ENST00000390465 SOGA1O94964 1423 aa21.53■■□□□ 1.04
TRAV38-2DV8-201ENST00000390465 RAD54L2Q9Y4B4 1467 aa21.52■■□□□ 1.03
TRAV38-2DV8-201ENST00000390465 ZNF608Q9ULD9 1512 aaPredicted RBP21.49■■□□□ 1.03
TRAV38-2DV8-201ENST00000390465 ABCA10Q8WWZ4 1543 aa21.46■■□□□ 1.03
TRAV38-2DV8-201ENST00000390465 EIF4G3O43432 1585 aaKnown RBP21.46■■□□□ 1.03
TRAV38-2DV8-201ENST00000390465 ABCA5Q8WWZ7 1642 aa21.38■■□□□ 1.01
TRAV38-2DV8-201ENST00000390465 AQRO60306 1485 aaKnown RBP eCLIP21.38■■□□□ 1.01
TRAV38-2DV8-201ENST00000390465 TDRD9Q8NDG6 1382 aaKnown RBP21.35■■□□□ 1.01
TRAV38-2DV8-201ENST00000390465 GAPVD1Q14C86 1478 aa21.31■■□□□ 1
TRAV38-2DV8-201ENST00000390465 PBRM1Q86U86 1689 aa21.31■■□□□ 1
TRAV38-2DV8-201ENST00000390465 GRIN2BQ13224 1484 aa21.28■■□□□ 1
TRAV38-2DV8-201ENST00000390465 MAGI1Q96QZ7 1491 aaPredicted RBP21.24■□□□□ 0.99
TRAV38-2DV8-201ENST00000390465 ERICH3Q5RHP9 1530 aa21.22■□□□□ 0.99
TRAV38-2DV8-201ENST00000390465 TRIM41Q8WV44 630 aa21.2■□□□□ 0.98
TRAV38-2DV8-201ENST00000390465 SNAPC4Q5SXM2 1469 aa21.2■□□□□ 0.98
TRAV38-2DV8-201ENST00000390465 KIF27Q86VH2 1401 aa21.19■□□□□ 0.98
TRAV38-2DV8-201ENST00000390465 CHD1O14646 1710 aa21.15■□□□□ 0.98
TRAV38-2DV8-201ENST00000390465 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
TRAV38-2DV8-201ENST00000390465 ADAMTS12P58397 1594 aa21.13■□□□□ 0.97
TRAV38-2DV8-201ENST00000390465 CHIC1Q5VXU3 224 aa21.11■□□□□ 0.97
TRAV38-2DV8-201ENST00000390465 FHAD1B1AJZ9 1412 aa21.08■□□□□ 0.97
TRAV38-2DV8-201ENST00000390465 IGF1RP08069 1367 aa21.08■□□□□ 0.96
TRAV38-2DV8-201ENST00000390465 CUL7Q14999 1698 aa21.07■□□□□ 0.96
TRAV38-2DV8-201ENST00000390465 OSCARQ8IYS5 282 aa21.05■□□□□ 0.96
TRAV38-2DV8-201ENST00000390465 DNAJC5Q9H3Z4 198 aa21.04■□□□□ 0.96
TRAV38-2DV8-201ENST00000390465 RUSC2Q8N2Y8 1516 aa21.04■□□□□ 0.96
TRAV38-2DV8-201ENST00000390465 GRIN2AQ12879 1464 aa21.02■□□□□ 0.96
TRAV38-2DV8-201ENST00000390465 CHMP7Q8WUX9 453 aaPredicted RBP21.01■□□□□ 0.95
TRAV38-2DV8-201ENST00000390465 FBLN2P98095 1184 aa20.97■□□□□ 0.95
TRAV38-2DV8-201ENST00000390465 EEA1Q15075 1411 aa20.95■□□□□ 0.95
TRAV38-2DV8-201ENST00000390465 CLASP1Q7Z460 1538 aa20.95■□□□□ 0.94
TRAV38-2DV8-201ENST00000390465 NUP160Q12769 1436 aa20.95■□□□□ 0.94
TRAV38-2DV8-201ENST00000390465 CARMIL1Q5VZK9 1371 aa20.94■□□□□ 0.94
TRAV38-2DV8-201ENST00000390465 CEP170Q5SW79 1584 aa20.92■□□□□ 0.94
TRAV38-2DV8-201ENST00000390465 PRXQ9BXM0 1461 aa20.88■□□□□ 0.93
TRAV38-2DV8-201ENST00000390465 RAPGEF2Q9Y4G8 1499 aa20.86■□□□□ 0.93
TRAV38-2DV8-201ENST00000390465 CSRNP3Q8WYN3 585 aa20.82■□□□□ 0.92
TRAV38-2DV8-201ENST00000390465 SHROOM2Q13796 1616 aa20.81■□□□□ 0.92
TRAV38-2DV8-201ENST00000390465 KIAA0586Q9BVV6 1533 aa20.78■□□□□ 0.92
TRAV38-2DV8-201ENST00000390465 ARHGEF11O15085 1522 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms