RNA–Protein interactions for RNA: ENST00000390424.2

TRAV2-201, Transcript of T cell receptor alpha variable 2, humanhuman

APPRIS P1 BASIC

Gene TRAV2, Length 348 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2-201ENST00000390424 NISCHQ9Y2I1 1504 aa24.59■■□□□ 1.53
TRAV2-201ENST00000390424 ABCC9O60706 1549 aa23.62■■□□□ 1.37
TRAV2-201ENST00000390424 DNAJC5BQ9UF47 199 aa23.16■■□□□ 1.3
TRAV2-201ENST00000390424 CCDC180Q9P1Z9 1646 aa22.49■■□□□ 1.19
TRAV2-201ENST00000390424 DNAJC5Q9H3Z4 198 aa22.19■■□□□ 1.14
TRAV2-201ENST00000390424 RB1CC1Q8TDY2 1594 aa22.02■■□□□ 1.12
TRAV2-201ENST00000390424 PABPN1Q86U42 306 aaKnown RBP eCLIP21.88■■□□□ 1.09
TRAV2-201ENST00000390424 NACADO15069 1562 aa21.61■■□□□ 1.05
TRAV2-201ENST00000390424 CECR2Q9BXF3 1484 aa21.43■■□□□ 1.02
TRAV2-201ENST00000390424 DCAF8L2P0C7V8 631 aa21.4■■□□□ 1.02
TRAV2-201ENST00000390424 UNC13AQ9UPW8 1703 aa21.33■■□□□ 1.01
TRAV2-201ENST00000390424 BICRAQ9NZM4 1560 aa21.31■■□□□ 1
TRAV2-201ENST00000390424 CC2D2AQ9P2K1 1620 aa21.25■□□□□ 0.99
TRAV2-201ENST00000390424 SHROOM4Q9ULL8 1493 aa21.06■□□□□ 0.96
TRAV2-201ENST00000390424 MYO15BQ96JP2 1530 aa20.96■□□□□ 0.95
TRAV2-201ENST00000390424 EIF4G1Q04637 1599 aaKnown RBP20.94■□□□□ 0.94
TRAV2-201ENST00000390424 CUX2O14529 1486 aa20.87■□□□□ 0.93
TRAV2-201ENST00000390424 TRIM41Q8WV44 630 aa20.73■□□□□ 0.91
TRAV2-201ENST00000390424 ERCC6Q03468 1493 aa20.54■□□□□ 0.88
TRAV2-201ENST00000390424 SCRIBQ14160 1630 aa20.45■□□□□ 0.87
TRAV2-201ENST00000390424 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.83
TRAV2-201ENST00000390424 ZCCHC6Q5VYS8 1495 aaKnown RBP20.1■□□□□ 0.81
TRAV2-201ENST00000390424 NCAPD3P42695 1498 aa19.99■□□□□ 0.79
TRAV2-201ENST00000390424 NESP48681 1621 aa19.93■□□□□ 0.78
TRAV2-201ENST00000390424 THOC2Q8NI27 1593 aaKnown RBP19.91■□□□□ 0.78
TRAV2-201ENST00000390424 AEBP2Q6ZN18 517 aaPredicted RBP19.89■□□□□ 0.77
TRAV2-201ENST00000390424 OSCARQ8IYS5 282 aa19.85■□□□□ 0.77
TRAV2-201ENST00000390424 ATAD2BQ9ULI0 1458 aa19.73■□□□□ 0.75
TRAV2-201ENST00000390424 SMARCA2P51531 1590 aa19.73■□□□□ 0.75
TRAV2-201ENST00000390424 PDS5BQ9NTI5 1447 aa19.69■□□□□ 0.74
TRAV2-201ENST00000390424 HMGXB3Q12766 1538 aa19.67■□□□□ 0.74
TRAV2-201ENST00000390424 LAMC3Q9Y6N6 1575 aa19.67■□□□□ 0.74
TRAV2-201ENST00000390424 BAZ1AQ9NRL2 1556 aaPredicted RBP19.66■□□□□ 0.74
TRAV2-201ENST00000390424 TRHP20396 242 aaPredicted RBP19.59■□□□□ 0.73
TRAV2-201ENST00000390424 KIF21AQ7Z4S6 1674 aa19.57■□□□□ 0.72
TRAV2-201ENST00000390424 MRC2Q9UBG0 1479 aa19.5■□□□□ 0.71
TRAV2-201ENST00000390424 BAZ1BQ9UIG0 1483 aaKnown RBP19.5■□□□□ 0.71
TRAV2-201ENST00000390424 RIMBP3CA6NJZ7 1639 aa19.5■□□□□ 0.71
TRAV2-201ENST00000390424 RIMBP3BA6NNM3 1639 aa19.5■□□□□ 0.71
TRAV2-201ENST00000390424 RIMBP3Q9UFD9 1639 aa19.5■□□□□ 0.71
TRAV2-201ENST00000390424 WDR62O43379 1518 aa19.45■□□□□ 0.7
TRAV2-201ENST00000390424 CYB5RLQ6IPT4 315 aa19.42■□□□□ 0.7
TRAV2-201ENST00000390424 SMARCA4P51532 1647 aa19.36■□□□□ 0.69
TRAV2-201ENST00000390424 ARHGEF11O15085 1522 aa19.36■□□□□ 0.69
TRAV2-201ENST00000390424 CADPSQ9ULU8 1353 aa19.35■□□□□ 0.69
TRAV2-201ENST00000390424 PEG3Q9GZU2 1588 aa19.21■□□□□ 0.67
TRAV2-201ENST00000390424 CEP164Q9UPV0 1460 aa19.21■□□□□ 0.67
TRAV2-201ENST00000390424 ILDR1Q86SU0 546 aaPredicted RBP19.14■□□□□ 0.65
TRAV2-201ENST00000390424 FANCD2Q9BXW9 1451 aa19.09■□□□□ 0.65
TRAV2-201ENST00000390424 ARAP1Q96P48 1450 aa19.08■□□□□ 0.64
TRAV2-201ENST00000390424 RSF1Q96T23 1441 aaPredicted RBP18.97■□□□□ 0.63
TRAV2-201ENST00000390424 URB2Q14146 1524 aaKnown RBP18.94■□□□□ 0.62
TRAV2-201ENST00000390424 IFT140Q96RY7 1462 aa18.9■□□□□ 0.62
TRAV2-201ENST00000390424 ZNF608Q9ULD9 1512 aaPredicted RBP18.9■□□□□ 0.62
TRAV2-201ENST00000390424 MROH2BQ7Z745 1585 aa18.89■□□□□ 0.61
TRAV2-201ENST00000390424 CFTRP13569 1480 aa18.85■□□□□ 0.61
TRAV2-201ENST00000390424 FBLN2P98095 1184 aa18.85■□□□□ 0.61
TRAV2-201ENST00000390424 CHD1O14646 1710 aa18.73■□□□□ 0.59
TRAV2-201ENST00000390424 EIF4G3O43432 1585 aaKnown RBP18.69■□□□□ 0.58
TRAV2-201ENST00000390424 AQRO60306 1485 aaKnown RBP eCLIP18.64■□□□□ 0.57
TRAV2-201ENST00000390424 WIZO95785 1651 aa18.57■□□□□ 0.56
TRAV2-201ENST00000390424 ABCC8Q09428 1581 aa18.57■□□□□ 0.56
TRAV2-201ENST00000390424 TOPBP1Q92547 1522 aa18.57■□□□□ 0.56
TRAV2-201ENST00000390424 CLASP1Q7Z460 1538 aa18.54■□□□□ 0.56
TRAV2-201ENST00000390424 KDM4FA0A1W2PPD8 638 aa18.54■□□□□ 0.56
TRAV2-201ENST00000390424 CHMP7Q8WUX9 453 aaPredicted RBP18.54■□□□□ 0.56
TRAV2-201ENST00000390424 GAPVD1Q14C86 1478 aa18.52■□□□□ 0.56
TRAV2-201ENST00000390424 SYNJ1O43426 1573 aa18.5■□□□□ 0.55
TRAV2-201ENST00000390424 TARBP1Q13395 1621 aaKnown RBP18.44■□□□□ 0.54
TRAV2-201ENST00000390424 PRDM2Q13029 1718 aa18.43■□□□□ 0.54
TRAV2-201ENST00000390424 DNMBPQ6XZF7 1577 aa18.39■□□□□ 0.53
TRAV2-201ENST00000390424 TDRD9Q8NDG6 1382 aaKnown RBP18.38■□□□□ 0.53
TRAV2-201ENST00000390424 SNAPC4Q5SXM2 1469 aa18.38■□□□□ 0.53
TRAV2-201ENST00000390424 FBXO41Q8TF61 875 aa18.34■□□□□ 0.53
TRAV2-201ENST00000390424 MAGI1Q96QZ7 1491 aaPredicted RBP18.33■□□□□ 0.53
TRAV2-201ENST00000390424 TOP2AP11388 1531 aaKnown RBP18.31■□□□□ 0.52
TRAV2-201ENST00000390424 POLA1P09884 1462 aaPredicted RBP18.31■□□□□ 0.52
TRAV2-201ENST00000390424 SYNJ2O15056 1496 aa18.29■□□□□ 0.52
TRAV2-201ENST00000390424 SOGA1O94964 1423 aa18.29■□□□□ 0.52
TRAV2-201ENST00000390424 FAM69CQ0P6D2 419 aa18.28■□□□□ 0.52
TRAV2-201ENST00000390424 ERCC6L2Q5T890 1561 aa18.28■□□□□ 0.52
TRAV2-201ENST00000390424 KIF13AQ9H1H9 1805 aa18.27■□□□□ 0.52
TRAV2-201ENST00000390424 RAD54L2Q9Y4B4 1467 aa18.26■□□□□ 0.51
TRAV2-201ENST00000390424 WDR97A6NE52 1622 aa18.25■□□□□ 0.51
TRAV2-201ENST00000390424 GRIN2BQ13224 1484 aa18.23■□□□□ 0.51
TRAV2-201ENST00000390424 KDM6BO15054 1643 aa18.17■□□□□ 0.5
TRAV2-201ENST00000390424 ABCC10Q5T3U5 1492 aa18.16■□□□□ 0.5
TRAV2-201ENST00000390424 NPM1P06748 294 aaKnown RBP eCLIP18.16■□□□□ 0.5
TRAV2-201ENST00000390424 CCDC88BA6NC98 1476 aa18.15■□□□□ 0.5
TRAV2-201ENST00000390424 LMTK3Q96Q04 1460 aa18.15■□□□□ 0.5
TRAV2-201ENST00000390424 HECW2Q9P2P5 1572 aa18.15■□□□□ 0.5
TRAV2-201ENST00000390424 ADGRL1O94910 1474 aa18.08■□□□□ 0.49
TRAV2-201ENST00000390424 SOCS7O14512 581 aa18.07■□□□□ 0.48
TRAV2-201ENST00000390424 CEP170Q5SW79 1584 aa18.05■□□□□ 0.48
TRAV2-201ENST00000390424 FGD5Q6ZNL6 1462 aa18.03■□□□□ 0.48
TRAV2-201ENST00000390424 MAPKBP1O60336 1514 aa17.99■□□□□ 0.47
TRAV2-201ENST00000390424 DIP2BQ9P265 1576 aa17.99■□□□□ 0.47
TRAV2-201ENST00000390424 GRIN2AQ12879 1464 aa17.96■□□□□ 0.47
TRAV2-201ENST00000390424 NUP160Q12769 1436 aa17.95■□□□□ 0.46
TRAV2-201ENST00000390424 PBRM1Q86U86 1689 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms