RNA–Protein interactions for RNA: ENST00000390394.3

TRBV20-1-201, Transcript of T cell receptor beta variable 20-1, humanhuman

APPRIS P1 BASIC

Gene TRBV20-1, Length 413 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1-201ENST00000390394 NISCHQ9Y2I1 1504 aa22.76■■□□□ 1.23
TRBV20-1-201ENST00000390394 CCDC180Q9P1Z9 1646 aa20.13■□□□□ 0.81
TRBV20-1-201ENST00000390394 ABCC9O60706 1549 aa19.56■□□□□ 0.72
TRBV20-1-201ENST00000390394 ZCCHC6Q5VYS8 1495 aaKnown RBP19.01■□□□□ 0.63
TRBV20-1-201ENST00000390394 DCAF8L2P0C7V8 631 aa18.94■□□□□ 0.62
TRBV20-1-201ENST00000390394 MYO15BQ96JP2 1530 aa18.9■□□□□ 0.62
TRBV20-1-201ENST00000390394 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
TRBV20-1-201ENST00000390394 NACADO15069 1562 aa18.89■□□□□ 0.62
TRBV20-1-201ENST00000390394 RB1CC1Q8TDY2 1594 aa18.84■□□□□ 0.61
TRBV20-1-201ENST00000390394 DNAJC5BQ9UF47 199 aa18.79■□□□□ 0.6
TRBV20-1-201ENST00000390394 SCRIBQ14160 1630 aa18.32■□□□□ 0.52
TRBV20-1-201ENST00000390394 UNC13AQ9UPW8 1703 aa18.27■□□□□ 0.52
TRBV20-1-201ENST00000390394 SHROOM4Q9ULL8 1493 aa18.15■□□□□ 0.5
TRBV20-1-201ENST00000390394 PABPN1Q86U42 306 aaKnown RBP eCLIP18.15■□□□□ 0.5
TRBV20-1-201ENST00000390394 BICRAQ9NZM4 1560 aa18.13■□□□□ 0.49
TRBV20-1-201ENST00000390394 CC2D2AQ9P2K1 1620 aa17.72■□□□□ 0.43
TRBV20-1-201ENST00000390394 EIF4G1Q04637 1599 aaKnown RBP17.7■□□□□ 0.42
TRBV20-1-201ENST00000390394 CECR2Q9BXF3 1484 aa17.69■□□□□ 0.42
TRBV20-1-201ENST00000390394 DNAJC5Q9H3Z4 198 aa17.69■□□□□ 0.42
TRBV20-1-201ENST00000390394 BAZ1AQ9NRL2 1556 aaPredicted RBP17.66■□□□□ 0.42
TRBV20-1-201ENST00000390394 SMARCA4P51532 1647 aa17.58■□□□□ 0.41
TRBV20-1-201ENST00000390394 MROH2BQ7Z745 1585 aa17.49■□□□□ 0.39
TRBV20-1-201ENST00000390394 SMARCA2P51531 1590 aa17.49■□□□□ 0.39
TRBV20-1-201ENST00000390394 RSF1Q96T23 1441 aaPredicted RBP17.44■□□□□ 0.38
TRBV20-1-201ENST00000390394 PEG3Q9GZU2 1588 aa17.44■□□□□ 0.38
TRBV20-1-201ENST00000390394 ATAD2BQ9ULI0 1458 aa17.43■□□□□ 0.38
TRBV20-1-201ENST00000390394 NCAPD3P42695 1498 aa17.41■□□□□ 0.38
TRBV20-1-201ENST00000390394 HMGXB3Q12766 1538 aa17.35■□□□□ 0.37
TRBV20-1-201ENST00000390394 BAZ1BQ9UIG0 1483 aaKnown RBP17.34■□□□□ 0.37
TRBV20-1-201ENST00000390394 WIZO95785 1651 aa17.3■□□□□ 0.36
TRBV20-1-201ENST00000390394 SUPT5HO00267 1087 aaKnown RBP17.23■□□□□ 0.35
TRBV20-1-201ENST00000390394 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.34
TRBV20-1-201ENST00000390394 CUX2O14529 1486 aa17.14■□□□□ 0.33
TRBV20-1-201ENST00000390394 CCDC88BA6NC98 1476 aa16.99■□□□□ 0.31
TRBV20-1-201ENST00000390394 CADPSQ9ULU8 1353 aa16.93■□□□□ 0.3
TRBV20-1-201ENST00000390394 ERCC6Q03468 1493 aa16.93■□□□□ 0.3
TRBV20-1-201ENST00000390394 LAMC3Q9Y6N6 1575 aa16.92■□□□□ 0.3
TRBV20-1-201ENST00000390394 CFTRP13569 1480 aa16.87■□□□□ 0.29
TRBV20-1-201ENST00000390394 PDS5BQ9NTI5 1447 aa16.84■□□□□ 0.29
TRBV20-1-201ENST00000390394 NESP48681 1621 aa16.8■□□□□ 0.28
TRBV20-1-201ENST00000390394 PRDM2Q13029 1718 aa16.73■□□□□ 0.27
TRBV20-1-201ENST00000390394 FANCD2Q9BXW9 1451 aa16.71■□□□□ 0.27
TRBV20-1-201ENST00000390394 THOC2Q8NI27 1593 aaKnown RBP16.68■□□□□ 0.26
TRBV20-1-201ENST00000390394 CEP164Q9UPV0 1460 aa16.68■□□□□ 0.26
TRBV20-1-201ENST00000390394 KIF21AQ7Z4S6 1674 aa16.62■□□□□ 0.25
TRBV20-1-201ENST00000390394 TRIM41Q8WV44 630 aa16.61■□□□□ 0.25
TRBV20-1-201ENST00000390394 MRC2Q9UBG0 1479 aa16.59■□□□□ 0.25
TRBV20-1-201ENST00000390394 ABCC8Q09428 1581 aa16.59■□□□□ 0.25
TRBV20-1-201ENST00000390394 WDR62O43379 1518 aa16.5■□□□□ 0.23
TRBV20-1-201ENST00000390394 DNMBPQ6XZF7 1577 aa16.48■□□□□ 0.23
TRBV20-1-201ENST00000390394 WRNQ14191 1432 aaPredicted RBP eCLIP16.48■□□□□ 0.23
TRBV20-1-201ENST00000390394 URB2Q14146 1524 aaKnown RBP16.47■□□□□ 0.23
TRBV20-1-201ENST00000390394 TOPBP1Q92547 1522 aa16.45■□□□□ 0.22
TRBV20-1-201ENST00000390394 CUX1P39880 1505 aa16.4■□□□□ 0.22
TRBV20-1-201ENST00000390394 TOP2BQ02880 1626 aa16.38■□□□□ 0.21
TRBV20-1-201ENST00000390394 BIVM-ERCC5R4GMW8 1640 aa16.36■□□□□ 0.21
TRBV20-1-201ENST00000390394 IFT140Q96RY7 1462 aa16.34■□□□□ 0.21
TRBV20-1-201ENST00000390394 POLA1P09884 1462 aaPredicted RBP16.33■□□□□ 0.2
TRBV20-1-201ENST00000390394 FGD5Q6ZNL6 1462 aa16.33■□□□□ 0.2
TRBV20-1-201ENST00000390394 SYNJ1O43426 1573 aa16.33■□□□□ 0.2
TRBV20-1-201ENST00000390394 SOGA1O94964 1423 aa16.31■□□□□ 0.2
TRBV20-1-201ENST00000390394 CHIC1Q5VXU3 224 aa16.24■□□□□ 0.19
TRBV20-1-201ENST00000390394 WDR97A6NE52 1622 aa16.23■□□□□ 0.19
TRBV20-1-201ENST00000390394 RAD54L2Q9Y4B4 1467 aa16.22■□□□□ 0.19
TRBV20-1-201ENST00000390394 OSCARQ8IYS5 282 aa16.22■□□□□ 0.19
TRBV20-1-201ENST00000390394 ABCA10Q8WWZ4 1543 aa16.22■□□□□ 0.19
TRBV20-1-201ENST00000390394 TARBP1Q13395 1621 aaKnown RBP16.22■□□□□ 0.19
TRBV20-1-201ENST00000390394 KIF27Q86VH2 1401 aa16.15■□□□□ 0.18
TRBV20-1-201ENST00000390394 RIMBP3CA6NJZ7 1639 aa16.15■□□□□ 0.18
TRBV20-1-201ENST00000390394 RIMBP3BA6NNM3 1639 aa16.15■□□□□ 0.18
TRBV20-1-201ENST00000390394 RIMBP3Q9UFD9 1639 aa16.15■□□□□ 0.18
TRBV20-1-201ENST00000390394 TDRD9Q8NDG6 1382 aaKnown RBP16.14■□□□□ 0.17
TRBV20-1-201ENST00000390394 GAPVD1Q14C86 1478 aa16.13■□□□□ 0.17
TRBV20-1-201ENST00000390394 ZNF608Q9ULD9 1512 aaPredicted RBP16.13■□□□□ 0.17
TRBV20-1-201ENST00000390394 AQRO60306 1485 aaKnown RBP eCLIP16.11■□□□□ 0.17
TRBV20-1-201ENST00000390394 EIF4G3O43432 1585 aaKnown RBP16.11■□□□□ 0.17
TRBV20-1-201ENST00000390394 GRIN2BQ13224 1484 aa16.1■□□□□ 0.17
TRBV20-1-201ENST00000390394 EEA1Q15075 1411 aa16.08■□□□□ 0.16
TRBV20-1-201ENST00000390394 ABCA5Q8WWZ7 1642 aa16.08■□□□□ 0.16
TRBV20-1-201ENST00000390394 ERICH3Q5RHP9 1530 aa16.05■□□□□ 0.16
TRBV20-1-201ENST00000390394 MAGI1Q96QZ7 1491 aaPredicted RBP16.03■□□□□ 0.16
TRBV20-1-201ENST00000390394 PBRM1Q86U86 1689 aa16.02■□□□□ 0.15
TRBV20-1-201ENST00000390394 IGF1RP08069 1367 aa15.99■□□□□ 0.15
TRBV20-1-201ENST00000390394 SNAPC4Q5SXM2 1469 aa15.98■□□□□ 0.15
TRBV20-1-201ENST00000390394 ARHGEF11O15085 1522 aa15.98■□□□□ 0.15
TRBV20-1-201ENST00000390394 FHAD1B1AJZ9 1412 aa15.97■□□□□ 0.15
TRBV20-1-201ENST00000390394 CHMP7Q8WUX9 453 aaPredicted RBP15.97■□□□□ 0.15
TRBV20-1-201ENST00000390394 CUL7Q14999 1698 aa15.96■□□□□ 0.15
TRBV20-1-201ENST00000390394 CSRNP3Q8WYN3 585 aa15.96■□□□□ 0.15
TRBV20-1-201ENST00000390394 SYNJ2O15056 1496 aa15.96■□□□□ 0.14
TRBV20-1-201ENST00000390394 CARMIL1Q5VZK9 1371 aa15.94■□□□□ 0.14
TRBV20-1-201ENST00000390394 FBLN2P98095 1184 aa15.93■□□□□ 0.14
TRBV20-1-201ENST00000390394 RUSC2Q8N2Y8 1516 aa15.93■□□□□ 0.14
TRBV20-1-201ENST00000390394 ADAMTS12P58397 1594 aa15.92■□□□□ 0.14
TRBV20-1-201ENST00000390394 FAM9AQ8IZU1 332 aaPredicted RBP15.89■□□□□ 0.13
TRBV20-1-201ENST00000390394 RAPGEF2Q9Y4G8 1499 aa15.87■□□□□ 0.13
TRBV20-1-201ENST00000390394 GRIN2AQ12879 1464 aa15.86■□□□□ 0.13
TRBV20-1-201ENST00000390394 PRXQ9BXM0 1461 aa15.85■□□□□ 0.13
TRBV20-1-201ENST00000390394 CHD1O14646 1710 aa15.85■□□□□ 0.13
TRBV20-1-201ENST00000390394 CYB5RLQ6IPT4 315 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms