RNA–Protein interactions for RNA: ENST00000390367.3

TRBV11-1-201, Transcript of T cell receptor beta variable 11-1, humanhuman

APPRIS P1 BASIC

Gene TRBV11-1, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1-201ENST00000390367 NISCHQ9Y2I1 1504 aa22.32■■□□□ 1.16
TRBV11-1-201ENST00000390367 CCDC180Q9P1Z9 1646 aa19.54■□□□□ 0.72
TRBV11-1-201ENST00000390367 ZCCHC6Q5VYS8 1495 aaKnown RBP18.71■□□□□ 0.59
TRBV11-1-201ENST00000390367 DCAF8L2P0C7V8 631 aa18.59■□□□□ 0.57
TRBV11-1-201ENST00000390367 ABCC9O60706 1549 aa18.54■□□□□ 0.56
TRBV11-1-201ENST00000390367 DCAF1Q9Y4B6 1507 aa18.51■□□□□ 0.55
TRBV11-1-201ENST00000390367 MYO15BQ96JP2 1530 aa18.37■□□□□ 0.53
TRBV11-1-201ENST00000390367 NACADO15069 1562 aa18.28■□□□□ 0.52
TRBV11-1-201ENST00000390367 RB1CC1Q8TDY2 1594 aa18.15■□□□□ 0.5
TRBV11-1-201ENST00000390367 SHROOM4Q9ULL8 1493 aa18.07■□□□□ 0.48
TRBV11-1-201ENST00000390367 SCRIBQ14160 1630 aa17.87■□□□□ 0.45
TRBV11-1-201ENST00000390367 UNC13AQ9UPW8 1703 aa17.56■□□□□ 0.4
TRBV11-1-201ENST00000390367 PABPN1Q86U42 306 aaKnown RBP eCLIP17.48■□□□□ 0.39
TRBV11-1-201ENST00000390367 SUPT5HO00267 1087 aaKnown RBP17.43■□□□□ 0.38
TRBV11-1-201ENST00000390367 BICRAQ9NZM4 1560 aa17.43■□□□□ 0.38
TRBV11-1-201ENST00000390367 BAZ1AQ9NRL2 1556 aaPredicted RBP17.3■□□□□ 0.36
TRBV11-1-201ENST00000390367 CECR2Q9BXF3 1484 aa17.27■□□□□ 0.36
TRBV11-1-201ENST00000390367 RSF1Q96T23 1441 aaPredicted RBP17.25■□□□□ 0.35
TRBV11-1-201ENST00000390367 MROH2BQ7Z745 1585 aa17.17■□□□□ 0.34
TRBV11-1-201ENST00000390367 SMARCA4P51532 1647 aa17.15■□□□□ 0.34
TRBV11-1-201ENST00000390367 WIZO95785 1651 aa17.01■□□□□ 0.31
TRBV11-1-201ENST00000390367 EIF4G1Q04637 1599 aaKnown RBP17■□□□□ 0.31
TRBV11-1-201ENST00000390367 SMARCA2P51531 1590 aa16.99■□□□□ 0.31
TRBV11-1-201ENST00000390367 PEG3Q9GZU2 1588 aa16.98■□□□□ 0.31
TRBV11-1-201ENST00000390367 ATAD2BQ9ULI0 1458 aa16.94■□□□□ 0.3
TRBV11-1-201ENST00000390367 TOP2AP11388 1531 aaKnown RBP16.92■□□□□ 0.3
TRBV11-1-201ENST00000390367 BAZ1BQ9UIG0 1483 aaKnown RBP16.88■□□□□ 0.29
TRBV11-1-201ENST00000390367 NCAPD3P42695 1498 aa16.86■□□□□ 0.29
TRBV11-1-201ENST00000390367 HMGXB3Q12766 1538 aa16.8■□□□□ 0.28
TRBV11-1-201ENST00000390367 CC2D2AQ9P2K1 1620 aa16.77■□□□□ 0.27
TRBV11-1-201ENST00000390367 CCDC88BA6NC98 1476 aa16.73■□□□□ 0.27
TRBV11-1-201ENST00000390367 CHIC1Q5VXU3 224 aa16.59■□□□□ 0.25
TRBV11-1-201ENST00000390367 TRIM41Q8WV44 630 aa16.48■□□□□ 0.23
TRBV11-1-201ENST00000390367 CADPSQ9ULU8 1353 aa16.44■□□□□ 0.22
TRBV11-1-201ENST00000390367 CFTRP13569 1480 aa16.42■□□□□ 0.22
TRBV11-1-201ENST00000390367 DNAJC5BQ9UF47 199 aa16.37■□□□□ 0.21
TRBV11-1-201ENST00000390367 WRNQ14191 1432 aaPredicted RBP eCLIP16.31■□□□□ 0.2
TRBV11-1-201ENST00000390367 LAMC3Q9Y6N6 1575 aa16.3■□□□□ 0.2
TRBV11-1-201ENST00000390367 PRDM2Q13029 1718 aa16.28■□□□□ 0.2
TRBV11-1-201ENST00000390367 ABCC8Q09428 1581 aa16.26■□□□□ 0.19
TRBV11-1-201ENST00000390367 PDS5BQ9NTI5 1447 aa16.26■□□□□ 0.19
TRBV11-1-201ENST00000390367 FANCD2Q9BXW9 1451 aa16.22■□□□□ 0.19
TRBV11-1-201ENST00000390367 NESP48681 1621 aa16.17■□□□□ 0.18
TRBV11-1-201ENST00000390367 CEP164Q9UPV0 1460 aa16.16■□□□□ 0.18
TRBV11-1-201ENST00000390367 TOP2BQ02880 1626 aa16.13■□□□□ 0.17
TRBV11-1-201ENST00000390367 EEA1Q15075 1411 aa16.11■□□□□ 0.17
TRBV11-1-201ENST00000390367 SYNJ1O43426 1573 aa16.11■□□□□ 0.17
TRBV11-1-201ENST00000390367 BIVM-ERCC5R4GMW8 1640 aa16.09■□□□□ 0.17
TRBV11-1-201ENST00000390367 CUX1P39880 1505 aa16.08■□□□□ 0.16
TRBV11-1-201ENST00000390367 FAM9AQ8IZU1 332 aaPredicted RBP16.07■□□□□ 0.16
TRBV11-1-201ENST00000390367 DNMBPQ6XZF7 1577 aa16.04■□□□□ 0.16
TRBV11-1-201ENST00000390367 ERCC6Q03468 1493 aa16.02■□□□□ 0.15
TRBV11-1-201ENST00000390367 TOPBP1Q92547 1522 aa16■□□□□ 0.15
TRBV11-1-201ENST00000390367 CSRNP3Q8WYN3 585 aa16■□□□□ 0.15
TRBV11-1-201ENST00000390367 MRC2Q9UBG0 1479 aa15.98■□□□□ 0.15
TRBV11-1-201ENST00000390367 SOGA1O94964 1423 aa15.98■□□□□ 0.15
TRBV11-1-201ENST00000390367 KIF21AQ7Z4S6 1674 aa15.98■□□□□ 0.15
TRBV11-1-201ENST00000390367 FGD5Q6ZNL6 1462 aa15.97■□□□□ 0.15
TRBV11-1-201ENST00000390367 KIF27Q86VH2 1401 aa15.96■□□□□ 0.15
TRBV11-1-201ENST00000390367 URB2Q14146 1524 aaKnown RBP15.94■□□□□ 0.14
TRBV11-1-201ENST00000390367 POLA1P09884 1462 aaPredicted RBP15.91■□□□□ 0.14
TRBV11-1-201ENST00000390367 LOC105371045A0A1W2PR82 267 aa15.9■□□□□ 0.14
TRBV11-1-201ENST00000390367 CUX2O14529 1486 aa15.88■□□□□ 0.13
TRBV11-1-201ENST00000390367 RUSC2Q8N2Y8 1516 aa15.86■□□□□ 0.13
TRBV11-1-201ENST00000390367 WDR62O43379 1518 aa15.85■□□□□ 0.13
TRBV11-1-201ENST00000390367 ABCA10Q8WWZ4 1543 aa15.85■□□□□ 0.13
TRBV11-1-201ENST00000390367 RAD54L2Q9Y4B4 1467 aa15.82■□□□□ 0.12
TRBV11-1-201ENST00000390367 UBTFP17480 764 aaKnown RBP15.81■□□□□ 0.12
TRBV11-1-201ENST00000390367 GOLGA3Q08378 1498 aa15.81■□□□□ 0.12
TRBV11-1-201ENST00000390367 IFT140Q96RY7 1462 aa15.8■□□□□ 0.12
TRBV11-1-201ENST00000390367 EHMT2Q96KQ7 1210 aa15.79■□□□□ 0.12
TRBV11-1-201ENST00000390367 KIF21BO75037 1637 aa15.78■□□□□ 0.12
TRBV11-1-201ENST00000390367 THOC2Q8NI27 1593 aaKnown RBP15.76■□□□□ 0.11
TRBV11-1-201ENST00000390367 IGF1RP08069 1367 aa15.75■□□□□ 0.11
TRBV11-1-201ENST00000390367 TNIKQ9UKE5 1360 aa15.75■□□□□ 0.11
TRBV11-1-201ENST00000390367 GAPVD1Q14C86 1478 aa15.73■□□□□ 0.11
TRBV11-1-201ENST00000390367 CARMIL1Q5VZK9 1371 aa15.73■□□□□ 0.11
TRBV11-1-201ENST00000390367 TDRD9Q8NDG6 1382 aaKnown RBP15.73■□□□□ 0.11
TRBV11-1-201ENST00000390367 ERICH3Q5RHP9 1530 aa15.73■□□□□ 0.11
TRBV11-1-201ENST00000390367 WDR97A6NE52 1622 aa15.72■□□□□ 0.11
TRBV11-1-201ENST00000390367 PRXQ9BXM0 1461 aa15.72■□□□□ 0.11
TRBV11-1-201ENST00000390367 TARBP1Q13395 1621 aaKnown RBP15.72■□□□□ 0.11
TRBV11-1-201ENST00000390367 RAPGEF2Q9Y4G8 1499 aa15.69■□□□□ 0.1
TRBV11-1-201ENST00000390367 CUL7Q14999 1698 aa15.67■□□□□ 0.1
TRBV11-1-201ENST00000390367 ABCA5Q8WWZ7 1642 aa15.66■□□□□ 0.1
TRBV11-1-201ENST00000390367 GRIN2BQ13224 1484 aa15.65■□□□□ 0.1
TRBV11-1-201ENST00000390367 AQRO60306 1485 aaKnown RBP eCLIP15.63■□□□□ 0.09
TRBV11-1-201ENST00000390367 CEP162Q5TB80 1403 aa15.6■□□□□ 0.09
TRBV11-1-201ENST00000390367 FHAD1B1AJZ9 1412 aa15.59■□□□□ 0.09
TRBV11-1-201ENST00000390367 ZNF608Q9ULD9 1512 aaPredicted RBP15.58■□□□□ 0.08
TRBV11-1-201ENST00000390367 PBRM1Q86U86 1689 aa15.56■□□□□ 0.08
TRBV11-1-201ENST00000390367 CLIP1P30622 1438 aa15.54■□□□□ 0.08
TRBV11-1-201ENST00000390367 EIF4G3O43432 1585 aaKnown RBP15.53■□□□□ 0.08
TRBV11-1-201ENST00000390367 MAGI1Q96QZ7 1491 aaPredicted RBP15.53■□□□□ 0.08
TRBV11-1-201ENST00000390367 CHMP7Q8WUX9 453 aaPredicted RBP15.51■□□□□ 0.07
TRBV11-1-201ENST00000390367 SNAPC4Q5SXM2 1469 aa15.49■□□□□ 0.07
TRBV11-1-201ENST00000390367 RANGAP1P46060 587 aaPredicted RBP15.49■□□□□ 0.07
TRBV11-1-201ENST00000390367 ADAMTS12P58397 1594 aa15.49■□□□□ 0.07
TRBV11-1-201ENST00000390367 SYNJ2O15056 1496 aa15.46■□□□□ 0.06
TRBV11-1-201ENST00000390367 FBLN2P98095 1184 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms