RNA–Protein interactions for RNA: ENST00000390362.1

TRBV5-3-201, Transcript of T cell receptor beta variable 5-3 (non-functional), humanhuman

APPRIS P1 BASIC

Gene TRBV5-3, Length 343 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3-201ENST00000390362 NISCHQ9Y2I1 1504 aa18.94■□□□□ 0.62
TRBV5-3-201ENST00000390362 CCDC180Q9P1Z9 1646 aa16.8■□□□□ 0.28
TRBV5-3-201ENST00000390362 ABCC9O60706 1549 aa16.28■□□□□ 0.2
TRBV5-3-201ENST00000390362 DCAF8L2P0C7V8 631 aa15.84■□□□□ 0.13
TRBV5-3-201ENST00000390362 NACADO15069 1562 aa15.82■□□□□ 0.12
TRBV5-3-201ENST00000390362 RB1CC1Q8TDY2 1594 aa15.79■□□□□ 0.12
TRBV5-3-201ENST00000390362 MYO15BQ96JP2 1530 aa15.78■□□□□ 0.12
TRBV5-3-201ENST00000390362 ZCCHC6Q5VYS8 1495 aaKnown RBP15.76■□□□□ 0.11
TRBV5-3-201ENST00000390362 DCAF1Q9Y4B6 1507 aa15.73■□□□□ 0.11
TRBV5-3-201ENST00000390362 AEBP2Q6ZN18 517 aaPredicted RBP15.61■□□□□ 0.09
TRBV5-3-201ENST00000390362 UNC13AQ9UPW8 1703 aa15.29■□□□□ 0.04
TRBV5-3-201ENST00000390362 SCRIBQ14160 1630 aa15.25■□□□□ 0.03
TRBV5-3-201ENST00000390362 PABPN1Q86U42 306 aaKnown RBP eCLIP15.25■□□□□ 0.03
TRBV5-3-201ENST00000390362 SHROOM4Q9ULL8 1493 aa15.21■□□□□ 0.03
TRBV5-3-201ENST00000390362 BICRAQ9NZM4 1560 aa15.19■□□□□ 0.02
TRBV5-3-201ENST00000390362 CHIC1Q5VXU3 224 aa15.17■□□□□ 0.02
TRBV5-3-201ENST00000390362 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
TRBV5-3-201ENST00000390362 EIF4G1Q04637 1599 aaKnown RBP14.83□□□□□ -0.04
TRBV5-3-201ENST00000390362 CC2D2AQ9P2K1 1620 aa14.74□□□□□ -0.05
TRBV5-3-201ENST00000390362 BAZ1AQ9NRL2 1556 aaPredicted RBP14.7□□□□□ -0.06
TRBV5-3-201ENST00000390362 CECR2Q9BXF3 1484 aa14.67□□□□□ -0.06
TRBV5-3-201ENST00000390362 SMARCA4P51532 1647 aa14.64□□□□□ -0.07
TRBV5-3-201ENST00000390362 DNAJC5Q9H3Z4 198 aa14.62□□□□□ -0.07
TRBV5-3-201ENST00000390362 SMARCA2P51531 1590 aa14.6□□□□□ -0.07
TRBV5-3-201ENST00000390362 NCAPD3P42695 1498 aa14.58□□□□□ -0.08
TRBV5-3-201ENST00000390362 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
TRBV5-3-201ENST00000390362 MROH2BQ7Z745 1585 aa14.53□□□□□ -0.08
TRBV5-3-201ENST00000390362 PEG3Q9GZU2 1588 aa14.53□□□□□ -0.08
TRBV5-3-201ENST00000390362 HMGXB3Q12766 1538 aa14.5□□□□□ -0.09
TRBV5-3-201ENST00000390362 BAZ1BQ9UIG0 1483 aaKnown RBP14.47□□□□□ -0.09
TRBV5-3-201ENST00000390362 RSF1Q96T23 1441 aaPredicted RBP14.45□□□□□ -0.1
TRBV5-3-201ENST00000390362 WIZO95785 1651 aa14.37□□□□□ -0.11
TRBV5-3-201ENST00000390362 TOP2AP11388 1531 aaKnown RBP14.28□□□□□ -0.12
TRBV5-3-201ENST00000390362 SUPT5HO00267 1087 aaKnown RBP14.2□□□□□ -0.14
TRBV5-3-201ENST00000390362 LAMC3Q9Y6N6 1575 aa14.17□□□□□ -0.14
TRBV5-3-201ENST00000390362 CADPSQ9ULU8 1353 aa14.17□□□□□ -0.14
TRBV5-3-201ENST00000390362 PDS5BQ9NTI5 1447 aa14.14□□□□□ -0.15
TRBV5-3-201ENST00000390362 CCDC88BA6NC98 1476 aa14.12□□□□□ -0.15
TRBV5-3-201ENST00000390362 ERCC6Q03468 1493 aa14.11□□□□□ -0.15
TRBV5-3-201ENST00000390362 CFTRP13569 1480 aa14.08□□□□□ -0.16
TRBV5-3-201ENST00000390362 NESP48681 1621 aa14.08□□□□□ -0.16
TRBV5-3-201ENST00000390362 FANCD2Q9BXW9 1451 aa13.97□□□□□ -0.17
TRBV5-3-201ENST00000390362 CEP164Q9UPV0 1460 aa13.95□□□□□ -0.18
TRBV5-3-201ENST00000390362 PRDM2Q13029 1718 aa13.94□□□□□ -0.18
TRBV5-3-201ENST00000390362 CUX2O14529 1486 aa13.93□□□□□ -0.18
TRBV5-3-201ENST00000390362 KIF21AQ7Z4S6 1674 aa13.91□□□□□ -0.18
TRBV5-3-201ENST00000390362 MRC2Q9UBG0 1479 aa13.9□□□□□ -0.18
TRBV5-3-201ENST00000390362 ABCC8Q09428 1581 aa13.88□□□□□ -0.19
TRBV5-3-201ENST00000390362 THOC2Q8NI27 1593 aaKnown RBP13.85□□□□□ -0.19
TRBV5-3-201ENST00000390362 WDR62O43379 1518 aa13.83□□□□□ -0.2
TRBV5-3-201ENST00000390362 URB2Q14146 1524 aaKnown RBP13.76□□□□□ -0.21
TRBV5-3-201ENST00000390362 DNMBPQ6XZF7 1577 aa13.75□□□□□ -0.21
TRBV5-3-201ENST00000390362 TOPBP1Q92547 1522 aa13.74□□□□□ -0.21
TRBV5-3-201ENST00000390362 IFT140Q96RY7 1462 aa13.67□□□□□ -0.22
TRBV5-3-201ENST00000390362 WRNQ14191 1432 aaPredicted RBP eCLIP13.65□□□□□ -0.22
TRBV5-3-201ENST00000390362 CUX1P39880 1505 aa13.64□□□□□ -0.23
TRBV5-3-201ENST00000390362 SOGA1O94964 1423 aa13.64□□□□□ -0.23
TRBV5-3-201ENST00000390362 POLA1P09884 1462 aaPredicted RBP13.61□□□□□ -0.23
TRBV5-3-201ENST00000390362 TRIM41Q8WV44 630 aa13.61□□□□□ -0.23
TRBV5-3-201ENST00000390362 FGD5Q6ZNL6 1462 aa13.6□□□□□ -0.23
TRBV5-3-201ENST00000390362 TOP2BQ02880 1626 aa13.59□□□□□ -0.23
TRBV5-3-201ENST00000390362 WDR97A6NE52 1622 aa13.57□□□□□ -0.24
TRBV5-3-201ENST00000390362 BIVM-ERCC5R4GMW8 1640 aa13.57□□□□□ -0.24
TRBV5-3-201ENST00000390362 TARBP1Q13395 1621 aaKnown RBP13.55□□□□□ -0.24
TRBV5-3-201ENST00000390362 RAD54L2Q9Y4B4 1467 aa13.54□□□□□ -0.24
TRBV5-3-201ENST00000390362 SYNJ1O43426 1573 aa13.52□□□□□ -0.25
TRBV5-3-201ENST00000390362 ABCA10Q8WWZ4 1543 aa13.51□□□□□ -0.25
TRBV5-3-201ENST00000390362 ZNF608Q9ULD9 1512 aaPredicted RBP13.5□□□□□ -0.25
TRBV5-3-201ENST00000390362 TDRD9Q8NDG6 1382 aaKnown RBP13.49□□□□□ -0.25
TRBV5-3-201ENST00000390362 AQRO60306 1485 aaKnown RBP eCLIP13.48□□□□□ -0.25
TRBV5-3-201ENST00000390362 EIF4G3O43432 1585 aaKnown RBP13.46□□□□□ -0.25
TRBV5-3-201ENST00000390362 GRIN2BQ13224 1484 aa13.46□□□□□ -0.25
TRBV5-3-201ENST00000390362 GAPVD1Q14C86 1478 aa13.46□□□□□ -0.25
TRBV5-3-201ENST00000390362 OSCARQ8IYS5 282 aa13.43□□□□□ -0.26
TRBV5-3-201ENST00000390362 MAGI1Q96QZ7 1491 aaPredicted RBP13.42□□□□□ -0.26
TRBV5-3-201ENST00000390362 KIF27Q86VH2 1401 aa13.41□□□□□ -0.26
TRBV5-3-201ENST00000390362 CHMP7Q8WUX9 453 aaPredicted RBP13.4□□□□□ -0.26
TRBV5-3-201ENST00000390362 ABCA5Q8WWZ7 1642 aa13.39□□□□□ -0.27
TRBV5-3-201ENST00000390362 SENP3Q9H4L4 574 aaPredicted RBP13.39□□□□□ -0.27
TRBV5-3-201ENST00000390362 FBLN2P98095 1184 aa13.38□□□□□ -0.27
TRBV5-3-201ENST00000390362 ERICH3Q5RHP9 1530 aa13.37□□□□□ -0.27
TRBV5-3-201ENST00000390362 SNAPC4Q5SXM2 1469 aa13.36□□□□□ -0.27
TRBV5-3-201ENST00000390362 PBRM1Q86U86 1689 aa13.35□□□□□ -0.27
TRBV5-3-201ENST00000390362 SYNJ2O15056 1496 aa13.35□□□□□ -0.27
TRBV5-3-201ENST00000390362 FHAD1B1AJZ9 1412 aa13.32□□□□□ -0.28
TRBV5-3-201ENST00000390362 IGF1RP08069 1367 aa13.31□□□□□ -0.28
TRBV5-3-201ENST00000390362 EEA1Q15075 1411 aa13.27□□□□□ -0.29
TRBV5-3-201ENST00000390362 CHD1O14646 1710 aa13.26□□□□□ -0.29
TRBV5-3-201ENST00000390362 CUL7Q14999 1698 aa13.26□□□□□ -0.29
TRBV5-3-201ENST00000390362 PHF23Q9BUL5 403 aaPredicted RBP13.26□□□□□ -0.29
TRBV5-3-201ENST00000390362 ADAMTS12P58397 1594 aa13.25□□□□□ -0.29
TRBV5-3-201ENST00000390362 GRIN2AQ12879 1464 aa13.25□□□□□ -0.29
TRBV5-3-201ENST00000390362 CARMIL1Q5VZK9 1371 aa13.25□□□□□ -0.29
TRBV5-3-201ENST00000390362 CSRNP3Q8WYN3 585 aa13.21□□□□□ -0.29
TRBV5-3-201ENST00000390362 NUP160Q12769 1436 aa13.18□□□□□ -0.3
TRBV5-3-201ENST00000390362 RAPGEF2Q9Y4G8 1499 aa13.17□□□□□ -0.3
TRBV5-3-201ENST00000390362 RUSC2Q8N2Y8 1516 aa13.17□□□□□ -0.3
TRBV5-3-201ENST00000390362 CLASP1Q7Z460 1538 aa13.15□□□□□ -0.3
TRBV5-3-201ENST00000390362 KIAA0586Q9BVV6 1533 aa13.13□□□□□ -0.31
TRBV5-3-201ENST00000390362 JPH4Q96JJ6 628 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms