RNA–Protein interactions for RNA: ENST00000390256.2

IGKV6-21-201, Transcript of immunoglobulin kappa variable 6-21 (non-functional), humanhuman

APPRIS P1 BASIC

Gene IGKV6-21, Length 406 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV6-21-201ENST00000390256 NISCHQ9Y2I1 1504 aa29.97■■■□□ 2.39
IGKV6-21-201ENST00000390256 CCDC180Q9P1Z9 1646 aa26.67■■□□□ 1.86
IGKV6-21-201ENST00000390256 ABCC9O60706 1549 aa26.41■■□□□ 1.82
IGKV6-21-201ENST00000390256 DCAF8L2P0C7V8 631 aa25.4■■□□□ 1.66
IGKV6-21-201ENST00000390256 RB1CC1Q8TDY2 1594 aa25.25■■□□□ 1.63
IGKV6-21-201ENST00000390256 NACADO15069 1562 aa25.15■■□□□ 1.62
IGKV6-21-201ENST00000390256 ZCCHC6Q5VYS8 1495 aaKnown RBP24.89■■□□□ 1.58
IGKV6-21-201ENST00000390256 MYO15BQ96JP2 1530 aa24.85■■□□□ 1.57
IGKV6-21-201ENST00000390256 PABPN1Q86U42 306 aaKnown RBP eCLIP24.72■■□□□ 1.55
IGKV6-21-201ENST00000390256 DCAF1Q9Y4B6 1507 aa24.71■■□□□ 1.55
IGKV6-21-201ENST00000390256 UNC13AQ9UPW8 1703 aa24.68■■□□□ 1.54
IGKV6-21-201ENST00000390256 BICRAQ9NZM4 1560 aa24.45■■□□□ 1.5
IGKV6-21-201ENST00000390256 SCRIBQ14160 1630 aa24.43■■□□□ 1.5
IGKV6-21-201ENST00000390256 DNAJC5BQ9UF47 199 aa24.41■■□□□ 1.5
IGKV6-21-201ENST00000390256 SHROOM4Q9ULL8 1493 aa24.09■■□□□ 1.45
IGKV6-21-201ENST00000390256 EIF4G1Q04637 1599 aaKnown RBP23.85■■□□□ 1.41
IGKV6-21-201ENST00000390256 CC2D2AQ9P2K1 1620 aa23.82■■□□□ 1.4
IGKV6-21-201ENST00000390256 CECR2Q9BXF3 1484 aa23.71■■□□□ 1.39
IGKV6-21-201ENST00000390256 SMARCA4P51532 1647 aa23.3■■□□□ 1.32
IGKV6-21-201ENST00000390256 BAZ1AQ9NRL2 1556 aaPredicted RBP23.24■■□□□ 1.31
IGKV6-21-201ENST00000390256 ATAD2BQ9ULI0 1458 aa23.22■■□□□ 1.31
IGKV6-21-201ENST00000390256 NCAPD3P42695 1498 aa23.21■■□□□ 1.31
IGKV6-21-201ENST00000390256 SMARCA2P51531 1590 aa23.18■■□□□ 1.3
IGKV6-21-201ENST00000390256 MROH2BQ7Z745 1585 aa23.12■■□□□ 1.29
IGKV6-21-201ENST00000390256 BAZ1BQ9UIG0 1483 aaKnown RBP23.05■■□□□ 1.28
IGKV6-21-201ENST00000390256 HMGXB3Q12766 1538 aa23.04■■□□□ 1.28
IGKV6-21-201ENST00000390256 PEG3Q9GZU2 1588 aa22.99■■□□□ 1.27
IGKV6-21-201ENST00000390256 WIZO95785 1651 aa22.9■■□□□ 1.26
IGKV6-21-201ENST00000390256 RSF1Q96T23 1441 aaPredicted RBP22.8■■□□□ 1.24
IGKV6-21-201ENST00000390256 ERCC6Q03468 1493 aa22.79■■□□□ 1.24
IGKV6-21-201ENST00000390256 NESP48681 1621 aa22.79■■□□□ 1.24
IGKV6-21-201ENST00000390256 LAMC3Q9Y6N6 1575 aa22.63■■□□□ 1.21
IGKV6-21-201ENST00000390256 TOP2AP11388 1531 aaKnown RBP22.58■■□□□ 1.21
IGKV6-21-201ENST00000390256 CADPSQ9ULU8 1353 aa22.57■■□□□ 1.2
IGKV6-21-201ENST00000390256 PDS5BQ9NTI5 1447 aa22.53■■□□□ 1.2
IGKV6-21-201ENST00000390256 CUX2O14529 1486 aa22.5■■□□□ 1.19
IGKV6-21-201ENST00000390256 KIF21AQ7Z4S6 1674 aa22.49■■□□□ 1.19
IGKV6-21-201ENST00000390256 THOC2Q8NI27 1593 aaKnown RBP22.38■■□□□ 1.17
IGKV6-21-201ENST00000390256 CCDC88BA6NC98 1476 aa22.37■■□□□ 1.17
IGKV6-21-201ENST00000390256 CFTRP13569 1480 aa22.35■■□□□ 1.17
IGKV6-21-201ENST00000390256 FANCD2Q9BXW9 1451 aa22.32■■□□□ 1.16
IGKV6-21-201ENST00000390256 CEP164Q9UPV0 1460 aa22.3■■□□□ 1.16
IGKV6-21-201ENST00000390256 SUPT5HO00267 1087 aaKnown RBP22.3■■□□□ 1.16
IGKV6-21-201ENST00000390256 MRC2Q9UBG0 1479 aa22.29■■□□□ 1.16
IGKV6-21-201ENST00000390256 PRDM2Q13029 1718 aa22.17■■□□□ 1.14
IGKV6-21-201ENST00000390256 WDR62O43379 1518 aa22.17■■□□□ 1.14
IGKV6-21-201ENST00000390256 DNAJC5Q9H3Z4 198 aa22.1■■□□□ 1.13
IGKV6-21-201ENST00000390256 URB2Q14146 1524 aaKnown RBP22.09■■□□□ 1.13
IGKV6-21-201ENST00000390256 TOPBP1Q92547 1522 aa21.93■■□□□ 1.1
IGKV6-21-201ENST00000390256 ABCC8Q09428 1581 aa21.91■■□□□ 1.1
IGKV6-21-201ENST00000390256 DNMBPQ6XZF7 1577 aa21.87■■□□□ 1.09
IGKV6-21-201ENST00000390256 IFT140Q96RY7 1462 aa21.83■■□□□ 1.08
IGKV6-21-201ENST00000390256 ZNF608Q9ULD9 1512 aaPredicted RBP21.77■■□□□ 1.08
IGKV6-21-201ENST00000390256 POLA1P09884 1462 aaPredicted RBP21.72■■□□□ 1.07
IGKV6-21-201ENST00000390256 SOGA1O94964 1423 aa21.7■■□□□ 1.06
IGKV6-21-201ENST00000390256 CUX1P39880 1505 aa21.7■■□□□ 1.06
IGKV6-21-201ENST00000390256 RAD54L2Q9Y4B4 1467 aa21.69■■□□□ 1.06
IGKV6-21-201ENST00000390256 AQRO60306 1485 aaKnown RBP eCLIP21.67■■□□□ 1.06
IGKV6-21-201ENST00000390256 FGD5Q6ZNL6 1462 aa21.67■■□□□ 1.06
IGKV6-21-201ENST00000390256 OSCARQ8IYS5 282 aa21.67■■□□□ 1.06
IGKV6-21-201ENST00000390256 TARBP1Q13395 1621 aaKnown RBP21.66■■□□□ 1.06
IGKV6-21-201ENST00000390256 EIF4G3O43432 1585 aaKnown RBP21.64■■□□□ 1.05
IGKV6-21-201ENST00000390256 TDRD9Q8NDG6 1382 aaKnown RBP21.61■■□□□ 1.05
IGKV6-21-201ENST00000390256 FBLN2P98095 1184 aa21.57■■□□□ 1.04
IGKV6-21-201ENST00000390256 WRNQ14191 1432 aaPredicted RBP eCLIP21.52■■□□□ 1.04
IGKV6-21-201ENST00000390256 SYNJ1O43426 1573 aa21.45■■□□□ 1.02
IGKV6-21-201ENST00000390256 TOP2BQ02880 1626 aa21.44■■□□□ 1.02
IGKV6-21-201ENST00000390256 CHD1O14646 1710 aa21.44■■□□□ 1.02
IGKV6-21-201ENST00000390256 TRIM41Q8WV44 630 aa21.44■■□□□ 1.02
IGKV6-21-201ENST00000390256 WDR97A6NE52 1622 aa21.43■■□□□ 1.02
IGKV6-21-201ENST00000390256 BIVM-ERCC5R4GMW8 1640 aa21.43■■□□□ 1.02
IGKV6-21-201ENST00000390256 SNAPC4Q5SXM2 1469 aa21.42■■□□□ 1.02
IGKV6-21-201ENST00000390256 CHMP7Q8WUX9 453 aaPredicted RBP21.42■■□□□ 1.02
IGKV6-21-201ENST00000390256 ABCA10Q8WWZ4 1543 aa21.41■■□□□ 1.02
IGKV6-21-201ENST00000390256 GRIN2BQ13224 1484 aa21.41■■□□□ 1.02
IGKV6-21-201ENST00000390256 GAPVD1Q14C86 1478 aa21.41■■□□□ 1.02
IGKV6-21-201ENST00000390256 PBRM1Q86U86 1689 aa21.36■■□□□ 1.01
IGKV6-21-201ENST00000390256 MAGI1Q96QZ7 1491 aaPredicted RBP21.34■■□□□ 1.01
IGKV6-21-201ENST00000390256 ABCA5Q8WWZ7 1642 aa21.32■■□□□ 1
IGKV6-21-201ENST00000390256 SYNJ2O15056 1496 aa21.28■■□□□ 1
IGKV6-21-201ENST00000390256 RIMBP3CA6NJZ7 1639 aa21.26■□□□□ 0.99
IGKV6-21-201ENST00000390256 RIMBP3BA6NNM3 1639 aa21.26■□□□□ 0.99
IGKV6-21-201ENST00000390256 RIMBP3Q9UFD9 1639 aa21.26■□□□□ 0.99
IGKV6-21-201ENST00000390256 ARHGEF11O15085 1522 aa21.23■□□□□ 0.99
IGKV6-21-201ENST00000390256 CYB5RLQ6IPT4 315 aa21.18■□□□□ 0.98
IGKV6-21-201ENST00000390256 ERICH3Q5RHP9 1530 aa21.14■□□□□ 0.98
IGKV6-21-201ENST00000390256 FHAD1B1AJZ9 1412 aa21.14■□□□□ 0.98
IGKV6-21-201ENST00000390256 ADAMTS12P58397 1594 aa21.14■□□□□ 0.97
IGKV6-21-201ENST00000390256 CLASP1Q7Z460 1538 aa21.13■□□□□ 0.97
IGKV6-21-201ENST00000390256 GRIN2AQ12879 1464 aa21.13■□□□□ 0.97
IGKV6-21-201ENST00000390256 KIF27Q86VH2 1401 aa21.1■□□□□ 0.97
IGKV6-21-201ENST00000390256 ARAP1Q96P48 1450 aa21.04■□□□□ 0.96
IGKV6-21-201ENST00000390256 IGF1RP08069 1367 aa21.03■□□□□ 0.96
IGKV6-21-201ENST00000390256 CEP170Q5SW79 1584 aa21.02■□□□□ 0.96
IGKV6-21-201ENST00000390256 NUP160Q12769 1436 aa21.01■□□□□ 0.95
IGKV6-21-201ENST00000390256 CUL7Q14999 1698 aa20.93■□□□□ 0.94
IGKV6-21-201ENST00000390256 CARMIL1Q5VZK9 1371 aa20.93■□□□□ 0.94
IGKV6-21-201ENST00000390256 JPH4Q96JJ6 628 aa20.92■□□□□ 0.94
IGKV6-21-201ENST00000390256 ERCC6L2Q5T890 1561 aa20.89■□□□□ 0.94
IGKV6-21-201ENST00000390256 RUSC2Q8N2Y8 1516 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms