RNA–Protein interactions for RNA: ENST00000384425.1

RNU1-46P-201, Transcript of RNA, U1 small nuclear 46, pseudogene, humanhuman

BASIC

Gene RNU1-46P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-46P-201ENST00000384425 NISCHQ9Y2I1 1504 aa14.76□□□□□ -0.05
RNU1-46P-201ENST00000384425 CCDC180Q9P1Z9 1646 aa12.9□□□□□ -0.34
RNU1-46P-201ENST00000384425 ZCCHC6Q5VYS8 1495 aaKnown RBP12.4□□□□□ -0.42
RNU1-46P-201ENST00000384425 DCAF1Q9Y4B6 1507 aa12.24□□□□□ -0.45
RNU1-46P-201ENST00000384425 DCAF8L2P0C7V8 631 aa12.21□□□□□ -0.45
RNU1-46P-201ENST00000384425 ABCC9O60706 1549 aa12.13□□□□□ -0.47
RNU1-46P-201ENST00000384425 MYO15BQ96JP2 1530 aa12.11□□□□□ -0.47
RNU1-46P-201ENST00000384425 SHROOM4Q9ULL8 1493 aa12.03□□□□□ -0.48
RNU1-46P-201ENST00000384425 NACADO15069 1562 aa12.02□□□□□ -0.49
RNU1-46P-201ENST00000384425 RB1CC1Q8TDY2 1594 aa11.92□□□□□ -0.5
RNU1-46P-201ENST00000384425 SCRIBQ14160 1630 aa11.82□□□□□ -0.52
RNU1-46P-201ENST00000384425 SUPT5HO00267 1087 aaKnown RBP11.62□□□□□ -0.55
RNU1-46P-201ENST00000384425 UNC13AQ9UPW8 1703 aa11.56□□□□□ -0.56
RNU1-46P-201ENST00000384425 BICRAQ9NZM4 1560 aa11.46□□□□□ -0.57
RNU1-46P-201ENST00000384425 RSF1Q96T23 1441 aaPredicted RBP11.45□□□□□ -0.58
RNU1-46P-201ENST00000384425 PABPN1Q86U42 306 aaKnown RBP eCLIP11.44□□□□□ -0.58
RNU1-46P-201ENST00000384425 BAZ1AQ9NRL2 1556 aaPredicted RBP11.43□□□□□ -0.58
RNU1-46P-201ENST00000384425 CECR2Q9BXF3 1484 aa11.43□□□□□ -0.58
RNU1-46P-201ENST00000384425 MROH2BQ7Z745 1585 aa11.38□□□□□ -0.59
RNU1-46P-201ENST00000384425 SMARCA4P51532 1647 aa11.35□□□□□ -0.59
RNU1-46P-201ENST00000384425 WIZO95785 1651 aa11.27□□□□□ -0.6
RNU1-46P-201ENST00000384425 TOP2AP11388 1531 aaKnown RBP11.22□□□□□ -0.61
RNU1-46P-201ENST00000384425 PEG3Q9GZU2 1588 aa11.21□□□□□ -0.61
RNU1-46P-201ENST00000384425 SMARCA2P51531 1590 aa11.2□□□□□ -0.62
RNU1-46P-201ENST00000384425 EIF4G1Q04637 1599 aaKnown RBP11.16□□□□□ -0.62
RNU1-46P-201ENST00000384425 ATAD2BQ9ULI0 1458 aa11.15□□□□□ -0.62
RNU1-46P-201ENST00000384425 BAZ1BQ9UIG0 1483 aaKnown RBP11.13□□□□□ -0.63
RNU1-46P-201ENST00000384425 CHIC1Q5VXU3 224 aa11.12□□□□□ -0.63
RNU1-46P-201ENST00000384425 CCDC88BA6NC98 1476 aa11.07□□□□□ -0.64
RNU1-46P-201ENST00000384425 NCAPD3P42695 1498 aa11.07□□□□□ -0.64
RNU1-46P-201ENST00000384425 HMGXB3Q12766 1538 aa11.07□□□□□ -0.64
RNU1-46P-201ENST00000384425 CC2D2AQ9P2K1 1620 aa10.98□□□□□ -0.65
RNU1-46P-201ENST00000384425 TRIM41Q8WV44 630 aa10.97□□□□□ -0.65
RNU1-46P-201ENST00000384425 ABCC8Q09428 1581 aa10.82□□□□□ -0.68
RNU1-46P-201ENST00000384425 CFTRP13569 1480 aa10.82□□□□□ -0.68
RNU1-46P-201ENST00000384425 WRNQ14191 1432 aaPredicted RBP eCLIP10.82□□□□□ -0.68
RNU1-46P-201ENST00000384425 CADPSQ9ULU8 1353 aa10.79□□□□□ -0.68
RNU1-46P-201ENST00000384425 PRDM2Q13029 1718 aa10.76□□□□□ -0.69
RNU1-46P-201ENST00000384425 EEA1Q15075 1411 aa10.73□□□□□ -0.69
RNU1-46P-201ENST00000384425 FAM9AQ8IZU1 332 aaPredicted RBP10.72□□□□□ -0.69
RNU1-46P-201ENST00000384425 SYNJ1O43426 1573 aa10.72□□□□□ -0.69
RNU1-46P-201ENST00000384425 TOP2BQ02880 1626 aa10.71□□□□□ -0.69
RNU1-46P-201ENST00000384425 LAMC3Q9Y6N6 1575 aa10.71□□□□□ -0.69
RNU1-46P-201ENST00000384425 BIVM-ERCC5R4GMW8 1640 aa10.69□□□□□ -0.7
RNU1-46P-201ENST00000384425 FANCD2Q9BXW9 1451 aa10.68□□□□□ -0.7
RNU1-46P-201ENST00000384425 LOC105371045A0A1W2PR82 267 aa10.66□□□□□ -0.7
RNU1-46P-201ENST00000384425 CUX1P39880 1505 aa10.65□□□□□ -0.7
RNU1-46P-201ENST00000384425 PDS5BQ9NTI5 1447 aa10.65□□□□□ -0.7
RNU1-46P-201ENST00000384425 SOGA1O94964 1423 aa10.63□□□□□ -0.71
RNU1-46P-201ENST00000384425 NESP48681 1621 aa10.62□□□□□ -0.71
RNU1-46P-201ENST00000384425 CEP164Q9UPV0 1460 aa10.62□□□□□ -0.71
RNU1-46P-201ENST00000384425 CSRNP3Q8WYN3 585 aa10.62□□□□□ -0.71
RNU1-46P-201ENST00000384425 DNAJC5BQ9UF47 199 aa10.61□□□□□ -0.71
RNU1-46P-201ENST00000384425 DNMBPQ6XZF7 1577 aa10.59□□□□□ -0.71
RNU1-46P-201ENST00000384425 KIF27Q86VH2 1401 aa10.57□□□□□ -0.72
RNU1-46P-201ENST00000384425 RUSC2Q8N2Y8 1516 aa10.56□□□□□ -0.72
RNU1-46P-201ENST00000384425 GOLGA3Q08378 1498 aa10.55□□□□□ -0.72
RNU1-46P-201ENST00000384425 FGD5Q6ZNL6 1462 aa10.55□□□□□ -0.72
RNU1-46P-201ENST00000384425 TOPBP1Q92547 1522 aa10.55□□□□□ -0.72
RNU1-46P-201ENST00000384425 EHMT2Q96KQ7 1210 aa10.54□□□□□ -0.72
RNU1-46P-201ENST00000384425 KIF21BO75037 1637 aa10.53□□□□□ -0.72
RNU1-46P-201ENST00000384425 TNIKQ9UKE5 1360 aa10.52□□□□□ -0.73
RNU1-46P-201ENST00000384425 URB2Q14146 1524 aaKnown RBP10.51□□□□□ -0.73
RNU1-46P-201ENST00000384425 KIF21AQ7Z4S6 1674 aa10.5□□□□□ -0.73
RNU1-46P-201ENST00000384425 CUX2O14529 1486 aa10.5□□□□□ -0.73
RNU1-46P-201ENST00000384425 UBTFP17480 764 aaKnown RBP10.5□□□□□ -0.73
RNU1-46P-201ENST00000384425 MRC2Q9UBG0 1479 aa10.49□□□□□ -0.73
RNU1-46P-201ENST00000384425 POLA1P09884 1462 aaPredicted RBP10.49□□□□□ -0.73
RNU1-46P-201ENST00000384425 ABCA10Q8WWZ4 1543 aa10.48□□□□□ -0.73
RNU1-46P-201ENST00000384425 ERCC6Q03468 1493 aa10.47□□□□□ -0.73
RNU1-46P-201ENST00000384425 ERICH3Q5RHP9 1530 aa10.47□□□□□ -0.73
RNU1-46P-201ENST00000384425 PRXQ9BXM0 1461 aa10.46□□□□□ -0.74
RNU1-46P-201ENST00000384425 CEP162Q5TB80 1403 aa10.44□□□□□ -0.74
RNU1-46P-201ENST00000384425 RAD54L2Q9Y4B4 1467 aa10.43□□□□□ -0.74
RNU1-46P-201ENST00000384425 RAPGEF2Q9Y4G8 1499 aa10.43□□□□□ -0.74
RNU1-46P-201ENST00000384425 IGF1RP08069 1367 aa10.41□□□□□ -0.74
RNU1-46P-201ENST00000384425 WDR62O43379 1518 aa10.41□□□□□ -0.74
RNU1-46P-201ENST00000384425 WDR97A6NE52 1622 aa10.4□□□□□ -0.75
RNU1-46P-201ENST00000384425 CARMIL1Q5VZK9 1371 aa10.39□□□□□ -0.75
RNU1-46P-201ENST00000384425 IFT140Q96RY7 1462 aa10.38□□□□□ -0.75
RNU1-46P-201ENST00000384425 CUL7Q14999 1698 aa10.38□□□□□ -0.75
RNU1-46P-201ENST00000384425 GAPVD1Q14C86 1478 aa10.37□□□□□ -0.75
RNU1-46P-201ENST00000384425 CLIP1P30622 1438 aa10.37□□□□□ -0.75
RNU1-46P-201ENST00000384425 TARBP1Q13395 1621 aaKnown RBP10.36□□□□□ -0.75
RNU1-46P-201ENST00000384425 ABCA5Q8WWZ7 1642 aa10.36□□□□□ -0.75
RNU1-46P-201ENST00000384425 TDRD9Q8NDG6 1382 aaKnown RBP10.35□□□□□ -0.75
RNU1-46P-201ENST00000384425 THOC2Q8NI27 1593 aaKnown RBP10.35□□□□□ -0.75
RNU1-46P-201ENST00000384425 GRIN2BQ13224 1484 aa10.3□□□□□ -0.76
RNU1-46P-201ENST00000384425 TRIM26Q12899 539 aaPredicted RBP10.29□□□□□ -0.76
RNU1-46P-201ENST00000384425 FHAD1B1AJZ9 1412 aa10.28□□□□□ -0.76
RNU1-46P-201ENST00000384425 VPS8Q8N3P4 1428 aa10.28□□□□□ -0.76
RNU1-46P-201ENST00000384425 RANGAP1P46060 587 aaPredicted RBP10.28□□□□□ -0.76
RNU1-46P-201ENST00000384425 PBRM1Q86U86 1689 aa10.28□□□□□ -0.76
RNU1-46P-201ENST00000384425 AQRO60306 1485 aaKnown RBP eCLIP10.27□□□□□ -0.77
RNU1-46P-201ENST00000384425 APLP2Q06481 763 aa10.26□□□□□ -0.77
RNU1-46P-201ENST00000384425 ZNF608Q9ULD9 1512 aaPredicted RBP10.24□□□□□ -0.77
RNU1-46P-201ENST00000384425 EIF4G3O43432 1585 aaKnown RBP10.24□□□□□ -0.77
RNU1-46P-201ENST00000384425 ADAMTS12P58397 1594 aa10.24□□□□□ -0.77
RNU1-46P-201ENST00000384425 PCGF6Q9BYE7 350 aa10.24□□□□□ -0.77
RNU1-46P-201ENST00000384425 CTTNBP2Q8WZ74 1663 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms