RNA–Protein interactions for RNA: ENST00000384010.1

RNVU1-18-201, Transcript of RNA, variant U1 small nuclear 18, humanhuman

BASIC

Gene RNVU1-18, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-18-201ENST00000384010 NISCHQ9Y2I1 1504 aa20.34■□□□□ 0.85
RNVU1-18-201ENST00000384010 CCDC180Q9P1Z9 1646 aa17.86■□□□□ 0.45
RNVU1-18-201ENST00000384010 ZCCHC6Q5VYS8 1495 aaKnown RBP17.05■□□□□ 0.32
RNVU1-18-201ENST00000384010 ABCC9O60706 1549 aa16.95■□□□□ 0.3
RNVU1-18-201ENST00000384010 DCAF1Q9Y4B6 1507 aa16.9■□□□□ 0.3
RNVU1-18-201ENST00000384010 DCAF8L2P0C7V8 631 aa16.82■□□□□ 0.28
RNVU1-18-201ENST00000384010 MYO15BQ96JP2 1530 aa16.8■□□□□ 0.28
RNVU1-18-201ENST00000384010 NACADO15069 1562 aa16.7■□□□□ 0.26
RNVU1-18-201ENST00000384010 RB1CC1Q8TDY2 1594 aa16.58■□□□□ 0.24
RNVU1-18-201ENST00000384010 SHROOM4Q9ULL8 1493 aa16.35■□□□□ 0.21
RNVU1-18-201ENST00000384010 SCRIBQ14160 1630 aa16.29■□□□□ 0.2
RNVU1-18-201ENST00000384010 UNC13AQ9UPW8 1703 aa16.08■□□□□ 0.17
RNVU1-18-201ENST00000384010 BICRAQ9NZM4 1560 aa15.99■□□□□ 0.15
RNVU1-18-201ENST00000384010 PABPN1Q86U42 306 aaKnown RBP eCLIP15.93■□□□□ 0.14
RNVU1-18-201ENST00000384010 BAZ1AQ9NRL2 1556 aaPredicted RBP15.75■□□□□ 0.11
RNVU1-18-201ENST00000384010 CECR2Q9BXF3 1484 aa15.74■□□□□ 0.11
RNVU1-18-201ENST00000384010 SUPT5HO00267 1087 aaKnown RBP15.7■□□□□ 0.1
RNVU1-18-201ENST00000384010 RSF1Q96T23 1441 aaPredicted RBP15.69■□□□□ 0.1
RNVU1-18-201ENST00000384010 SMARCA4P51532 1647 aa15.65■□□□□ 0.1
RNVU1-18-201ENST00000384010 MROH2BQ7Z745 1585 aa15.65■□□□□ 0.1
RNVU1-18-201ENST00000384010 EIF4G1Q04637 1599 aaKnown RBP15.55■□□□□ 0.08
RNVU1-18-201ENST00000384010 PEG3Q9GZU2 1588 aa15.52■□□□□ 0.07
RNVU1-18-201ENST00000384010 SMARCA2P51531 1590 aa15.5■□□□□ 0.07
RNVU1-18-201ENST00000384010 WIZO95785 1651 aa15.49■□□□□ 0.07
RNVU1-18-201ENST00000384010 ATAD2BQ9ULI0 1458 aa15.46■□□□□ 0.06
RNVU1-18-201ENST00000384010 TOP2AP11388 1531 aaKnown RBP15.42■□□□□ 0.06
RNVU1-18-201ENST00000384010 NCAPD3P42695 1498 aa15.4■□□□□ 0.06
RNVU1-18-201ENST00000384010 BAZ1BQ9UIG0 1483 aaKnown RBP15.38■□□□□ 0.05
RNVU1-18-201ENST00000384010 HMGXB3Q12766 1538 aa15.36■□□□□ 0.05
RNVU1-18-201ENST00000384010 CC2D2AQ9P2K1 1620 aa15.35■□□□□ 0.05
RNVU1-18-201ENST00000384010 CCDC88BA6NC98 1476 aa15.22■□□□□ 0.03
RNVU1-18-201ENST00000384010 DNAJC5BQ9UF47 199 aa15.06■□□□□ 0
RNVU1-18-201ENST00000384010 CFTRP13569 1480 aa14.99□□□□□ -0.01
RNVU1-18-201ENST00000384010 CADPSQ9ULU8 1353 aa14.98□□□□□ -0.01
RNVU1-18-201ENST00000384010 CHIC1Q5VXU3 224 aa14.96□□□□□ -0.01
RNVU1-18-201ENST00000384010 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
RNVU1-18-201ENST00000384010 PRDM2Q13029 1718 aa14.86□□□□□ -0.03
RNVU1-18-201ENST00000384010 TRIM41Q8WV44 630 aa14.85□□□□□ -0.03
RNVU1-18-201ENST00000384010 PDS5BQ9NTI5 1447 aa14.83□□□□□ -0.04
RNVU1-18-201ENST00000384010 WRNQ14191 1432 aaPredicted RBP eCLIP14.81□□□□□ -0.04
RNVU1-18-201ENST00000384010 NESP48681 1621 aa14.79□□□□□ -0.04
RNVU1-18-201ENST00000384010 FANCD2Q9BXW9 1451 aa14.79□□□□□ -0.04
RNVU1-18-201ENST00000384010 ABCC8Q09428 1581 aa14.77□□□□□ -0.04
RNVU1-18-201ENST00000384010 CEP164Q9UPV0 1460 aa14.73□□□□□ -0.05
RNVU1-18-201ENST00000384010 TOP2BQ02880 1626 aa14.69□□□□□ -0.06
RNVU1-18-201ENST00000384010 BIVM-ERCC5R4GMW8 1640 aa14.67□□□□□ -0.06
RNVU1-18-201ENST00000384010 SYNJ1O43426 1573 aa14.67□□□□□ -0.06
RNVU1-18-201ENST00000384010 CUX1P39880 1505 aa14.66□□□□□ -0.06
RNVU1-18-201ENST00000384010 DNMBPQ6XZF7 1577 aa14.63□□□□□ -0.07
RNVU1-18-201ENST00000384010 ERCC6Q03468 1493 aa14.62□□□□□ -0.07
RNVU1-18-201ENST00000384010 KIF21AQ7Z4S6 1674 aa14.61□□□□□ -0.07
RNVU1-18-201ENST00000384010 MRC2Q9UBG0 1479 aa14.6□□□□□ -0.07
RNVU1-18-201ENST00000384010 TOPBP1Q92547 1522 aa14.6□□□□□ -0.07
RNVU1-18-201ENST00000384010 EEA1Q15075 1411 aa14.59□□□□□ -0.07
RNVU1-18-201ENST00000384010 URB2Q14146 1524 aaKnown RBP14.57□□□□□ -0.08
RNVU1-18-201ENST00000384010 FGD5Q6ZNL6 1462 aa14.55□□□□□ -0.08
RNVU1-18-201ENST00000384010 WDR62O43379 1518 aa14.51□□□□□ -0.09
RNVU1-18-201ENST00000384010 POLA1P09884 1462 aaPredicted RBP14.5□□□□□ -0.09
RNVU1-18-201ENST00000384010 SOGA1O94964 1423 aa14.49□□□□□ -0.09
RNVU1-18-201ENST00000384010 KIF27Q86VH2 1401 aa14.49□□□□□ -0.09
RNVU1-18-201ENST00000384010 FAM9AQ8IZU1 332 aaPredicted RBP14.47□□□□□ -0.09
RNVU1-18-201ENST00000384010 CSRNP3Q8WYN3 585 aa14.47□□□□□ -0.09
RNVU1-18-201ENST00000384010 THOC2Q8NI27 1593 aaKnown RBP14.46□□□□□ -0.09
RNVU1-18-201ENST00000384010 ABCA10Q8WWZ4 1543 aa14.46□□□□□ -0.1
RNVU1-18-201ENST00000384010 CUX2O14529 1486 aa14.43□□□□□ -0.1
RNVU1-18-201ENST00000384010 IFT140Q96RY7 1462 aa14.42□□□□□ -0.1
RNVU1-18-201ENST00000384010 RAD54L2Q9Y4B4 1467 aa14.42□□□□□ -0.1
RNVU1-18-201ENST00000384010 RUSC2Q8N2Y8 1516 aa14.41□□□□□ -0.1
RNVU1-18-201ENST00000384010 WDR97A6NE52 1622 aa14.37□□□□□ -0.11
RNVU1-18-201ENST00000384010 TARBP1Q13395 1621 aaKnown RBP14.37□□□□□ -0.11
RNVU1-18-201ENST00000384010 IGF1RP08069 1367 aa14.34□□□□□ -0.11
RNVU1-18-201ENST00000384010 GAPVD1Q14C86 1478 aa14.32□□□□□ -0.12
RNVU1-18-201ENST00000384010 LOC105371045A0A1W2PR82 267 aa14.32□□□□□ -0.12
RNVU1-18-201ENST00000384010 KIF21BO75037 1637 aa14.32□□□□□ -0.12
RNVU1-18-201ENST00000384010 TDRD9Q8NDG6 1382 aaKnown RBP14.32□□□□□ -0.12
RNVU1-18-201ENST00000384010 ABCA5Q8WWZ7 1642 aa14.31□□□□□ -0.12
RNVU1-18-201ENST00000384010 GOLGA3Q08378 1498 aa14.31□□□□□ -0.12
RNVU1-18-201ENST00000384010 PRXQ9BXM0 1461 aa14.31□□□□□ -0.12
RNVU1-18-201ENST00000384010 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
RNVU1-18-201ENST00000384010 CARMIL1Q5VZK9 1371 aa14.28□□□□□ -0.12
RNVU1-18-201ENST00000384010 GRIN2BQ13224 1484 aa14.26□□□□□ -0.13
RNVU1-18-201ENST00000384010 CUL7Q14999 1698 aa14.26□□□□□ -0.13
RNVU1-18-201ENST00000384010 UBTFP17480 764 aaKnown RBP14.25□□□□□ -0.13
RNVU1-18-201ENST00000384010 AQRO60306 1485 aaKnown RBP eCLIP14.25□□□□□ -0.13
RNVU1-18-201ENST00000384010 RAPGEF2Q9Y4G8 1499 aa14.25□□□□□ -0.13
RNVU1-18-201ENST00000384010 TNIKQ9UKE5 1360 aa14.24□□□□□ -0.13
RNVU1-18-201ENST00000384010 ZNF608Q9ULD9 1512 aaPredicted RBP14.23□□□□□ -0.13
RNVU1-18-201ENST00000384010 EIF4G3O43432 1585 aaKnown RBP14.21□□□□□ -0.14
RNVU1-18-201ENST00000384010 EHMT2Q96KQ7 1210 aa14.2□□□□□ -0.14
RNVU1-18-201ENST00000384010 FHAD1B1AJZ9 1412 aa14.2□□□□□ -0.14
RNVU1-18-201ENST00000384010 PBRM1Q86U86 1689 aa14.2□□□□□ -0.14
RNVU1-18-201ENST00000384010 MAGI1Q96QZ7 1491 aaPredicted RBP14.18□□□□□ -0.14
RNVU1-18-201ENST00000384010 ADAMTS12P58397 1594 aa14.13□□□□□ -0.15
RNVU1-18-201ENST00000384010 SNAPC4Q5SXM2 1469 aa14.13□□□□□ -0.15
RNVU1-18-201ENST00000384010 CEP162Q5TB80 1403 aa14.1□□□□□ -0.15
RNVU1-18-201ENST00000384010 SYNJ2O15056 1496 aa14.1□□□□□ -0.15
RNVU1-18-201ENST00000384010 CHMP7Q8WUX9 453 aaPredicted RBP14.09□□□□□ -0.15
RNVU1-18-201ENST00000384010 CLIP1P30622 1438 aa14.06□□□□□ -0.16
RNVU1-18-201ENST00000384010 GRIN2AQ12879 1464 aa14.06□□□□□ -0.16
RNVU1-18-201ENST00000384010 FBLN2P98095 1184 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms