RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 NISCHQ9Y2I1 1504 aa20.34■□□□□ 0.85
RNU1-28P-201ENST00000383861 CCDC180Q9P1Z9 1646 aa17.86■□□□□ 0.45
RNU1-28P-201ENST00000383861 ZCCHC6Q5VYS8 1495 aaKnown RBP17.05■□□□□ 0.32
RNU1-28P-201ENST00000383861 ABCC9O60706 1549 aa16.95■□□□□ 0.3
RNU1-28P-201ENST00000383861 DCAF1Q9Y4B6 1507 aa16.9■□□□□ 0.3
RNU1-28P-201ENST00000383861 DCAF8L2P0C7V8 631 aa16.82■□□□□ 0.28
RNU1-28P-201ENST00000383861 MYO15BQ96JP2 1530 aa16.8■□□□□ 0.28
RNU1-28P-201ENST00000383861 NACADO15069 1562 aa16.7■□□□□ 0.26
RNU1-28P-201ENST00000383861 RB1CC1Q8TDY2 1594 aa16.58■□□□□ 0.24
RNU1-28P-201ENST00000383861 SHROOM4Q9ULL8 1493 aa16.35■□□□□ 0.21
RNU1-28P-201ENST00000383861 SCRIBQ14160 1630 aa16.29■□□□□ 0.2
RNU1-28P-201ENST00000383861 UNC13AQ9UPW8 1703 aa16.08■□□□□ 0.17
RNU1-28P-201ENST00000383861 BICRAQ9NZM4 1560 aa15.99■□□□□ 0.15
RNU1-28P-201ENST00000383861 PABPN1Q86U42 306 aaKnown RBP eCLIP15.93■□□□□ 0.14
RNU1-28P-201ENST00000383861 BAZ1AQ9NRL2 1556 aaPredicted RBP15.75■□□□□ 0.11
RNU1-28P-201ENST00000383861 CECR2Q9BXF3 1484 aa15.74■□□□□ 0.11
RNU1-28P-201ENST00000383861 SUPT5HO00267 1087 aaKnown RBP15.7■□□□□ 0.1
RNU1-28P-201ENST00000383861 RSF1Q96T23 1441 aaPredicted RBP15.69■□□□□ 0.1
RNU1-28P-201ENST00000383861 SMARCA4P51532 1647 aa15.65■□□□□ 0.1
RNU1-28P-201ENST00000383861 MROH2BQ7Z745 1585 aa15.65■□□□□ 0.1
RNU1-28P-201ENST00000383861 EIF4G1Q04637 1599 aaKnown RBP15.55■□□□□ 0.08
RNU1-28P-201ENST00000383861 PEG3Q9GZU2 1588 aa15.52■□□□□ 0.07
RNU1-28P-201ENST00000383861 SMARCA2P51531 1590 aa15.5■□□□□ 0.07
RNU1-28P-201ENST00000383861 WIZO95785 1651 aa15.49■□□□□ 0.07
RNU1-28P-201ENST00000383861 ATAD2BQ9ULI0 1458 aa15.46■□□□□ 0.06
RNU1-28P-201ENST00000383861 TOP2AP11388 1531 aaKnown RBP15.42■□□□□ 0.06
RNU1-28P-201ENST00000383861 NCAPD3P42695 1498 aa15.4■□□□□ 0.06
RNU1-28P-201ENST00000383861 BAZ1BQ9UIG0 1483 aaKnown RBP15.38■□□□□ 0.05
RNU1-28P-201ENST00000383861 HMGXB3Q12766 1538 aa15.36■□□□□ 0.05
RNU1-28P-201ENST00000383861 CC2D2AQ9P2K1 1620 aa15.35■□□□□ 0.05
RNU1-28P-201ENST00000383861 CCDC88BA6NC98 1476 aa15.22■□□□□ 0.03
RNU1-28P-201ENST00000383861 DNAJC5BQ9UF47 199 aa15.06■□□□□ 0
RNU1-28P-201ENST00000383861 CFTRP13569 1480 aa14.99□□□□□ -0.01
RNU1-28P-201ENST00000383861 CADPSQ9ULU8 1353 aa14.98□□□□□ -0.01
RNU1-28P-201ENST00000383861 CHIC1Q5VXU3 224 aa14.96□□□□□ -0.01
RNU1-28P-201ENST00000383861 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
RNU1-28P-201ENST00000383861 PRDM2Q13029 1718 aa14.86□□□□□ -0.03
RNU1-28P-201ENST00000383861 TRIM41Q8WV44 630 aa14.85□□□□□ -0.03
RNU1-28P-201ENST00000383861 PDS5BQ9NTI5 1447 aa14.83□□□□□ -0.04
RNU1-28P-201ENST00000383861 WRNQ14191 1432 aaPredicted RBP eCLIP14.81□□□□□ -0.04
RNU1-28P-201ENST00000383861 NESP48681 1621 aa14.79□□□□□ -0.04
RNU1-28P-201ENST00000383861 FANCD2Q9BXW9 1451 aa14.79□□□□□ -0.04
RNU1-28P-201ENST00000383861 ABCC8Q09428 1581 aa14.77□□□□□ -0.04
RNU1-28P-201ENST00000383861 CEP164Q9UPV0 1460 aa14.73□□□□□ -0.05
RNU1-28P-201ENST00000383861 TOP2BQ02880 1626 aa14.69□□□□□ -0.06
RNU1-28P-201ENST00000383861 BIVM-ERCC5R4GMW8 1640 aa14.67□□□□□ -0.06
RNU1-28P-201ENST00000383861 SYNJ1O43426 1573 aa14.67□□□□□ -0.06
RNU1-28P-201ENST00000383861 CUX1P39880 1505 aa14.66□□□□□ -0.06
RNU1-28P-201ENST00000383861 DNMBPQ6XZF7 1577 aa14.63□□□□□ -0.07
RNU1-28P-201ENST00000383861 ERCC6Q03468 1493 aa14.62□□□□□ -0.07
RNU1-28P-201ENST00000383861 KIF21AQ7Z4S6 1674 aa14.61□□□□□ -0.07
RNU1-28P-201ENST00000383861 MRC2Q9UBG0 1479 aa14.6□□□□□ -0.07
RNU1-28P-201ENST00000383861 TOPBP1Q92547 1522 aa14.6□□□□□ -0.07
RNU1-28P-201ENST00000383861 EEA1Q15075 1411 aa14.59□□□□□ -0.07
RNU1-28P-201ENST00000383861 URB2Q14146 1524 aaKnown RBP14.57□□□□□ -0.08
RNU1-28P-201ENST00000383861 FGD5Q6ZNL6 1462 aa14.55□□□□□ -0.08
RNU1-28P-201ENST00000383861 WDR62O43379 1518 aa14.51□□□□□ -0.09
RNU1-28P-201ENST00000383861 POLA1P09884 1462 aaPredicted RBP14.5□□□□□ -0.09
RNU1-28P-201ENST00000383861 SOGA1O94964 1423 aa14.49□□□□□ -0.09
RNU1-28P-201ENST00000383861 KIF27Q86VH2 1401 aa14.49□□□□□ -0.09
RNU1-28P-201ENST00000383861 FAM9AQ8IZU1 332 aaPredicted RBP14.47□□□□□ -0.09
RNU1-28P-201ENST00000383861 CSRNP3Q8WYN3 585 aa14.47□□□□□ -0.09
RNU1-28P-201ENST00000383861 THOC2Q8NI27 1593 aaKnown RBP14.46□□□□□ -0.09
RNU1-28P-201ENST00000383861 ABCA10Q8WWZ4 1543 aa14.46□□□□□ -0.1
RNU1-28P-201ENST00000383861 CUX2O14529 1486 aa14.43□□□□□ -0.1
RNU1-28P-201ENST00000383861 IFT140Q96RY7 1462 aa14.42□□□□□ -0.1
RNU1-28P-201ENST00000383861 RAD54L2Q9Y4B4 1467 aa14.42□□□□□ -0.1
RNU1-28P-201ENST00000383861 RUSC2Q8N2Y8 1516 aa14.41□□□□□ -0.1
RNU1-28P-201ENST00000383861 WDR97A6NE52 1622 aa14.37□□□□□ -0.11
RNU1-28P-201ENST00000383861 TARBP1Q13395 1621 aaKnown RBP14.37□□□□□ -0.11
RNU1-28P-201ENST00000383861 IGF1RP08069 1367 aa14.34□□□□□ -0.11
RNU1-28P-201ENST00000383861 GAPVD1Q14C86 1478 aa14.32□□□□□ -0.12
RNU1-28P-201ENST00000383861 LOC105371045A0A1W2PR82 267 aa14.32□□□□□ -0.12
RNU1-28P-201ENST00000383861 KIF21BO75037 1637 aa14.32□□□□□ -0.12
RNU1-28P-201ENST00000383861 TDRD9Q8NDG6 1382 aaKnown RBP14.32□□□□□ -0.12
RNU1-28P-201ENST00000383861 ABCA5Q8WWZ7 1642 aa14.31□□□□□ -0.12
RNU1-28P-201ENST00000383861 GOLGA3Q08378 1498 aa14.31□□□□□ -0.12
RNU1-28P-201ENST00000383861 PRXQ9BXM0 1461 aa14.31□□□□□ -0.12
RNU1-28P-201ENST00000383861 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
RNU1-28P-201ENST00000383861 CARMIL1Q5VZK9 1371 aa14.28□□□□□ -0.12
RNU1-28P-201ENST00000383861 GRIN2BQ13224 1484 aa14.26□□□□□ -0.13
RNU1-28P-201ENST00000383861 CUL7Q14999 1698 aa14.26□□□□□ -0.13
RNU1-28P-201ENST00000383861 UBTFP17480 764 aaKnown RBP14.25□□□□□ -0.13
RNU1-28P-201ENST00000383861 AQRO60306 1485 aaKnown RBP eCLIP14.25□□□□□ -0.13
RNU1-28P-201ENST00000383861 RAPGEF2Q9Y4G8 1499 aa14.25□□□□□ -0.13
RNU1-28P-201ENST00000383861 TNIKQ9UKE5 1360 aa14.24□□□□□ -0.13
RNU1-28P-201ENST00000383861 ZNF608Q9ULD9 1512 aaPredicted RBP14.23□□□□□ -0.13
RNU1-28P-201ENST00000383861 EIF4G3O43432 1585 aaKnown RBP14.21□□□□□ -0.14
RNU1-28P-201ENST00000383861 EHMT2Q96KQ7 1210 aa14.2□□□□□ -0.14
RNU1-28P-201ENST00000383861 FHAD1B1AJZ9 1412 aa14.2□□□□□ -0.14
RNU1-28P-201ENST00000383861 PBRM1Q86U86 1689 aa14.2□□□□□ -0.14
RNU1-28P-201ENST00000383861 MAGI1Q96QZ7 1491 aaPredicted RBP14.18□□□□□ -0.14
RNU1-28P-201ENST00000383861 ADAMTS12P58397 1594 aa14.13□□□□□ -0.15
RNU1-28P-201ENST00000383861 SNAPC4Q5SXM2 1469 aa14.13□□□□□ -0.15
RNU1-28P-201ENST00000383861 CEP162Q5TB80 1403 aa14.1□□□□□ -0.15
RNU1-28P-201ENST00000383861 SYNJ2O15056 1496 aa14.1□□□□□ -0.15
RNU1-28P-201ENST00000383861 CHMP7Q8WUX9 453 aaPredicted RBP14.09□□□□□ -0.15
RNU1-28P-201ENST00000383861 CLIP1P30622 1438 aa14.06□□□□□ -0.16
RNU1-28P-201ENST00000383861 GRIN2AQ12879 1464 aa14.06□□□□□ -0.16
RNU1-28P-201ENST00000383861 FBLN2P98095 1184 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms