RNA–Protein interactions for RNA: ENST00000383714.8

PDHB-202, Transcript of pyruvate dehydrogenase E1 beta subunit, humanhuman

TSL 1 (best)

Gene PDHB, Length 1,478 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDHB-202ENST00000383714 NISCHQ9Y2I1 1504 aa33.03■■■□□ 2.88
PDHB-202ENST00000383714 AEBP2Q6ZN18 517 aaPredicted RBP30.32■■■□□ 2.44
PDHB-202ENST00000383714 CHIC1Q5VXU3 224 aa29.61■■■□□ 2.33
PDHB-202ENST00000383714 CCDC180Q9P1Z9 1646 aa29.12■■■□□ 2.25
PDHB-202ENST00000383714 ABCC9O60706 1549 aa27.89■■■□□ 2.06
PDHB-202ENST00000383714 ZCCHC6Q5VYS8 1495 aaKnown RBP27.68■■■□□ 2.02
PDHB-202ENST00000383714 DCAF1Q9Y4B6 1507 aa27.33■■□□□ 1.97
PDHB-202ENST00000383714 DCAF8L2P0C7V8 631 aa27.25■■□□□ 1.95
PDHB-202ENST00000383714 MYO15BQ96JP2 1530 aa27.2■■□□□ 1.94
PDHB-202ENST00000383714 NACADO15069 1562 aa27.17■■□□□ 1.94
PDHB-202ENST00000383714 RB1CC1Q8TDY2 1594 aa27.06■■□□□ 1.92
PDHB-202ENST00000383714 SCRIBQ14160 1630 aa26.66■■□□□ 1.86
PDHB-202ENST00000383714 UNC13AQ9UPW8 1703 aa26.6■■□□□ 1.85
PDHB-202ENST00000383714 SHROOM4Q9ULL8 1493 aa26.51■■□□□ 1.83
PDHB-202ENST00000383714 BICRAQ9NZM4 1560 aa26.31■■□□□ 1.8
PDHB-202ENST00000383714 PABPN1Q86U42 306 aaKnown RBP eCLIP26.13■■□□□ 1.77
PDHB-202ENST00000383714 PHF23Q9BUL5 403 aaPredicted RBP26.04■■□□□ 1.76
PDHB-202ENST00000383714 SENP3Q9H4L4 574 aaPredicted RBP25.73■■□□□ 1.71
PDHB-202ENST00000383714 CECR2Q9BXF3 1484 aa25.7■■□□□ 1.71
PDHB-202ENST00000383714 BAZ1AQ9NRL2 1556 aaPredicted RBP25.54■■□□□ 1.68
PDHB-202ENST00000383714 SMARCA4P51532 1647 aa25.54■■□□□ 1.68
PDHB-202ENST00000383714 EIF4G1Q04637 1599 aaKnown RBP25.52■■□□□ 1.68
PDHB-202ENST00000383714 MROH2BQ7Z745 1585 aa25.51■■□□□ 1.67
PDHB-202ENST00000383714 RSF1Q96T23 1441 aaPredicted RBP25.4■■□□□ 1.66
PDHB-202ENST00000383714 WIZO95785 1651 aa25.29■■□□□ 1.64
PDHB-202ENST00000383714 CC2D2AQ9P2K1 1620 aa25.27■■□□□ 1.64
PDHB-202ENST00000383714 PEG3Q9GZU2 1588 aa25.25■■□□□ 1.63
PDHB-202ENST00000383714 ATAD2BQ9ULI0 1458 aa25.2■■□□□ 1.63
PDHB-202ENST00000383714 SUPT5HO00267 1087 aaKnown RBP25.19■■□□□ 1.62
PDHB-202ENST00000383714 SMARCA2P51531 1590 aa25.18■■□□□ 1.62
PDHB-202ENST00000383714 NCAPD3P42695 1498 aa25.05■■□□□ 1.6
PDHB-202ENST00000383714 DNAJC5BQ9UF47 199 aa25.03■■□□□ 1.6
PDHB-202ENST00000383714 HMGXB3Q12766 1538 aa25.03■■□□□ 1.6
PDHB-202ENST00000383714 TOP2AP11388 1531 aaKnown RBP25.02■■□□□ 1.6
PDHB-202ENST00000383714 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
PDHB-202ENST00000383714 CCDC88BA6NC98 1476 aa24.71■■□□□ 1.55
PDHB-202ENST00000383714 CFTRP13569 1480 aa24.37■■□□□ 1.49
PDHB-202ENST00000383714 NESP48681 1621 aa24.36■■□□□ 1.49
PDHB-202ENST00000383714 CADPSQ9ULU8 1353 aa24.35■■□□□ 1.49
PDHB-202ENST00000383714 PRDM2Q13029 1718 aa24.33■■□□□ 1.49
PDHB-202ENST00000383714 LAMC3Q9Y6N6 1575 aa24.32■■□□□ 1.48
PDHB-202ENST00000383714 KIF21AQ7Z4S6 1674 aa24.12■■□□□ 1.45
PDHB-202ENST00000383714 FANCD2Q9BXW9 1451 aa24.1■■□□□ 1.45
PDHB-202ENST00000383714 PDS5BQ9NTI5 1447 aa24.08■■□□□ 1.44
PDHB-202ENST00000383714 PLPPR3Q6T4P5 718 aa24.06■■□□□ 1.44
PDHB-202ENST00000383714 ABCC8Q09428 1581 aa24.05■■□□□ 1.44
PDHB-202ENST00000383714 CEP164Q9UPV0 1460 aa24.01■■□□□ 1.43
PDHB-202ENST00000383714 ERCC6Q03468 1493 aa23.93■■□□□ 1.42
PDHB-202ENST00000383714 WRNQ14191 1432 aaPredicted RBP eCLIP23.91■■□□□ 1.42
PDHB-202ENST00000383714 SYNJ1O43426 1573 aa23.91■■□□□ 1.42
PDHB-202ENST00000383714 CUX1P39880 1505 aa23.9■■□□□ 1.42
PDHB-202ENST00000383714 FOXD1Q16676 465 aa23.87■■□□□ 1.41
PDHB-202ENST00000383714 URB2Q14146 1524 aaKnown RBP23.87■■□□□ 1.41
PDHB-202ENST00000383714 THOC2Q8NI27 1593 aaKnown RBP23.87■■□□□ 1.41
PDHB-202ENST00000383714 MRC2Q9UBG0 1479 aa23.86■■□□□ 1.41
PDHB-202ENST00000383714 BIVM-ERCC5R4GMW8 1640 aa23.85■■□□□ 1.41
PDHB-202ENST00000383714 DNMBPQ6XZF7 1577 aa23.85■■□□□ 1.41
PDHB-202ENST00000383714 TOP2BQ02880 1626 aa23.84■■□□□ 1.41
PDHB-202ENST00000383714 TOPBP1Q92547 1522 aa23.81■■□□□ 1.4
PDHB-202ENST00000383714 WDR62O43379 1518 aa23.78■■□□□ 1.4
PDHB-202ENST00000383714 TRIM41Q8WV44 630 aa23.71■■□□□ 1.39
PDHB-202ENST00000383714 FGD5Q6ZNL6 1462 aa23.69■■□□□ 1.38
PDHB-202ENST00000383714 POLA1P09884 1462 aaPredicted RBP23.66■■□□□ 1.38
PDHB-202ENST00000383714 CUX2O14529 1486 aa23.57■■□□□ 1.36
PDHB-202ENST00000383714 RAD54L2Q9Y4B4 1467 aa23.56■■□□□ 1.36
PDHB-202ENST00000383714 WDR97A6NE52 1622 aa23.54■■□□□ 1.36
PDHB-202ENST00000383714 TARBP1Q13395 1621 aaKnown RBP23.54■■□□□ 1.36
PDHB-202ENST00000383714 SOGA1O94964 1423 aa23.51■■□□□ 1.35
PDHB-202ENST00000383714 ABCA10Q8WWZ4 1543 aa23.47■■□□□ 1.35
PDHB-202ENST00000383714 IFT140Q96RY7 1462 aa23.46■■□□□ 1.35
PDHB-202ENST00000383714 RUSC2Q8N2Y8 1516 aa23.42■■□□□ 1.34
PDHB-202ENST00000383714 ZNF608Q9ULD9 1512 aaPredicted RBP23.38■■□□□ 1.33
PDHB-202ENST00000383714 ABCA5Q8WWZ7 1642 aa23.38■■□□□ 1.33
PDHB-202ENST00000383714 TDRD9Q8NDG6 1382 aaKnown RBP23.33■■□□□ 1.33
PDHB-202ENST00000383714 EIF4G3O43432 1585 aaKnown RBP23.33■■□□□ 1.33
PDHB-202ENST00000383714 KIF27Q86VH2 1401 aa23.33■■□□□ 1.32
PDHB-202ENST00000383714 AQRO60306 1485 aaKnown RBP eCLIP23.29■■□□□ 1.321e-6■■■□□ 17.5
PDHB-202ENST00000383714 EEA1Q15075 1411 aa23.28■■□□□ 1.32
PDHB-202ENST00000383714 PBRM1Q86U86 1689 aa23.28■■□□□ 1.32
PDHB-202ENST00000383714 GAPVD1Q14C86 1478 aa23.28■■□□□ 1.32
PDHB-202ENST00000383714 FAM9AQ8IZU1 332 aaPredicted RBP23.27■■□□□ 1.32
PDHB-202ENST00000383714 ERICH3Q5RHP9 1530 aa23.19■■□□□ 1.3
PDHB-202ENST00000383714 IGF1RP08069 1367 aa23.18■■□□□ 1.3
PDHB-202ENST00000383714 GRIN2BQ13224 1484 aa23.17■■□□□ 1.3
PDHB-202ENST00000383714 CSRNP3Q8WYN3 585 aa23.15■■□□□ 1.3
PDHB-202ENST00000383714 CUL7Q14999 1698 aa23.13■■□□□ 1.29
PDHB-202ENST00000383714 ADAMTS12P58397 1594 aa23.11■■□□□ 1.29
PDHB-202ENST00000383714 SNAPC4Q5SXM2 1469 aa23.1■■□□□ 1.29
PDHB-202ENST00000383714 PRXQ9BXM0 1461 aa23.1■■□□□ 1.29
PDHB-202ENST00000383714 KIF21BO75037 1637 aa23.09■■□□□ 1.29
PDHB-202ENST00000383714 MAGI1Q96QZ7 1491 aaPredicted RBP23.05■■□□□ 1.28
PDHB-202ENST00000383714 CARMIL1Q5VZK9 1371 aa23.04■■□□□ 1.28
PDHB-202ENST00000383714 RAPGEF2Q9Y4G8 1499 aa23.01■■□□□ 1.27
PDHB-202ENST00000383714 FHAD1B1AJZ9 1412 aa23.01■■□□□ 1.27
PDHB-202ENST00000383714 PPP6R1Q9UPN7 881 aa22.98■■□□□ 1.27
PDHB-202ENST00000383714 SYNJ2O15056 1496 aa22.96■■□□□ 1.27
PDHB-202ENST00000383714 GOLGA3Q08378 1498 aa22.96■■□□□ 1.27
PDHB-202ENST00000383714 ADRA2BP18089 450 aa22.96■■□□□ 1.27
PDHB-202ENST00000383714 EHMT2Q96KQ7 1210 aa22.95■■□□□ 1.26
PDHB-202ENST00000383714 CHD1O14646 1710 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms