RNA–Protein interactions for RNA: ENST00000381918.3

SLC1A3-202, Transcript of solute carrier family 1 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC1A3, Length 3,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-202ENST00000381918 NISCHQ9Y2I1 1504 aa13.08□□□□□ -0.31
SLC1A3-202ENST00000381918 CCDC180Q9P1Z9 1646 aa12.07□□□□□ -0.48
SLC1A3-202ENST00000381918 MYO15BQ96JP2 1530 aa11.34□□□□□ -0.59
SLC1A3-202ENST00000381918 DCAF1Q9Y4B6 1507 aa11.27□□□□□ -0.61
SLC1A3-202ENST00000381918 ZCCHC6Q5VYS8 1495 aaKnown RBP11.05□□□□□ -0.64
SLC1A3-202ENST00000381918 NACADO15069 1562 aa11.02□□□□□ -0.65
SLC1A3-202ENST00000381918 UNC13AQ9UPW8 1703 aa11.01□□□□□ -0.65
SLC1A3-202ENST00000381918 SHROOM4Q9ULL8 1493 aa10.89□□□□□ -0.67
SLC1A3-202ENST00000381918 RB1CC1Q8TDY2 1594 aa10.87□□□□□ -0.67
SLC1A3-202ENST00000381918 BICRAQ9NZM4 1560 aa10.71□□□□□ -0.69
SLC1A3-202ENST00000381918 ABCC9O60706 1549 aa10.64□□□□□ -0.71
SLC1A3-202ENST00000381918 PEG3Q9GZU2 1588 aa10.45□□□□□ -0.74
SLC1A3-202ENST00000381918 SCRIBQ14160 1630 aa10.31□□□□□ -0.76
SLC1A3-202ENST00000381918 SMARCA2P51531 1590 aa10.24□□□□□ -0.77
SLC1A3-202ENST00000381918 SMARCA4P51532 1647 aa10.21□□□□□ -0.77
SLC1A3-202ENST00000381918 PRDM2Q13029 1718 aa10.21□□□□□ -0.78
SLC1A3-202ENST00000381918 EIF4G1Q04637 1599 aaKnown RBP10.21□□□□□ -0.78
SLC1A3-202ENST00000381918 HMGXB3Q12766 1538 aa10.2□□□□□ -0.78
SLC1A3-202ENST00000381918 BAZ1AQ9NRL2 1556 aaPredicted RBP10.13□□□□□ -0.79
SLC1A3-202ENST00000381918 CC2D2AQ9P2K1 1620 aa10.1□□□□□ -0.79
SLC1A3-202ENST00000381918 NCAPD3P42695 1498 aa10.04□□□□□ -0.8
SLC1A3-202ENST00000381918 TOP2AP11388 1531 aaKnown RBP9.95□□□□□ -0.82
SLC1A3-202ENST00000381918 MROH2BQ7Z745 1585 aa9.94□□□□□ -0.82
SLC1A3-202ENST00000381918 ATAD2BQ9ULI0 1458 aa9.93□□□□□ -0.82
SLC1A3-202ENST00000381918 WIZO95785 1651 aa9.9□□□□□ -0.82
SLC1A3-202ENST00000381918 CECR2Q9BXF3 1484 aa9.89□□□□□ -0.83
SLC1A3-202ENST00000381918 LAMC3Q9Y6N6 1575 aa9.85□□□□□ -0.83
SLC1A3-202ENST00000381918 RSF1Q96T23 1441 aaPredicted RBP9.82□□□□□ -0.84
SLC1A3-202ENST00000381918 THOC2Q8NI27 1593 aaKnown RBP9.79□□□□□ -0.84
SLC1A3-202ENST00000381918 WDR97A6NE52 1622 aa9.77□□□□□ -0.85
SLC1A3-202ENST00000381918 KIF21AQ7Z4S6 1674 aa9.72□□□□□ -0.85
SLC1A3-202ENST00000381918 BAZ1BQ9UIG0 1483 aaKnown RBP9.7□□□□□ -0.86
SLC1A3-202ENST00000381918 BIVM-ERCC5R4GMW8 1640 aa9.69□□□□□ -0.86
SLC1A3-202ENST00000381918 CFTRP13569 1480 aa9.68□□□□□ -0.86
SLC1A3-202ENST00000381918 WDR62O43379 1518 aa9.67□□□□□ -0.86
SLC1A3-202ENST00000381918 PABPN1Q86U42 306 aaKnown RBP eCLIP9.61□□□□□ -0.87
SLC1A3-202ENST00000381918 DNAJC5BQ9UF47 199 aa9.61□□□□□ -0.87
SLC1A3-202ENST00000381918 CCDC88BA6NC98 1476 aa9.58□□□□□ -0.88
SLC1A3-202ENST00000381918 CUX2O14529 1486 aa9.55□□□□□ -0.88
SLC1A3-202ENST00000381918 TARBP1Q13395 1621 aaKnown RBP9.54□□□□□ -0.88
SLC1A3-202ENST00000381918 DNMBPQ6XZF7 1577 aa9.52□□□□□ -0.88
SLC1A3-202ENST00000381918 TOP2BQ02880 1626 aa9.51□□□□□ -0.89
SLC1A3-202ENST00000381918 ABCC8Q09428 1581 aa9.48□□□□□ -0.89
SLC1A3-202ENST00000381918 CADPSQ9ULU8 1353 aa9.48□□□□□ -0.89
SLC1A3-202ENST00000381918 ABCA5Q8WWZ7 1642 aa9.47□□□□□ -0.89
SLC1A3-202ENST00000381918 MRC2Q9UBG0 1479 aa9.44□□□□□ -0.9
SLC1A3-202ENST00000381918 PBRM1Q86U86 1689 aa9.43□□□□□ -0.9
SLC1A3-202ENST00000381918 URB2Q14146 1524 aaKnown RBP9.42□□□□□ -0.9
SLC1A3-202ENST00000381918 DCAF8L2P0C7V8 631 aa9.42□□□□□ -0.9
SLC1A3-202ENST00000381918 NESP48681 1621 aa9.39□□□□□ -0.91
SLC1A3-202ENST00000381918 CUX1P39880 1505 aa9.38□□□□□ -0.91
SLC1A3-202ENST00000381918 PDS5BQ9NTI5 1447 aa9.38□□□□□ -0.91
SLC1A3-202ENST00000381918 FANCD2Q9BXW9 1451 aa9.37□□□□□ -0.91
SLC1A3-202ENST00000381918 CEP164Q9UPV0 1460 aa9.36□□□□□ -0.91
SLC1A3-202ENST00000381918 TOPBP1Q92547 1522 aa9.36□□□□□ -0.91
SLC1A3-202ENST00000381918 SYNJ1O43426 1573 aa9.36□□□□□ -0.91
SLC1A3-202ENST00000381918 ABCA10Q8WWZ4 1543 aa9.32□□□□□ -0.92
SLC1A3-202ENST00000381918 EIF4G3O43432 1585 aaKnown RBP9.32□□□□□ -0.92
SLC1A3-202ENST00000381918 SHROOM2Q13796 1616 aa9.32□□□□□ -0.92
SLC1A3-202ENST00000381918 CUL7Q14999 1698 aa9.3□□□□□ -0.92
SLC1A3-202ENST00000381918 IFT140Q96RY7 1462 aa9.29□□□□□ -0.92
SLC1A3-202ENST00000381918 ERICH3Q5RHP9 1530 aa9.28□□□□□ -0.92
SLC1A3-202ENST00000381918 ADAMTS12P58397 1594 aa9.25□□□□□ -0.93
SLC1A3-202ENST00000381918 CLASP1Q7Z460 1538 aa9.24□□□□□ -0.93
SLC1A3-202ENST00000381918 POLA1P09884 1462 aaPredicted RBP9.24□□□□□ -0.93
SLC1A3-202ENST00000381918 CHD1O14646 1710 aa9.23□□□□□ -0.93
SLC1A3-202ENST00000381918 CTTNBP2Q8WZ74 1663 aa9.2□□□□□ -0.94
SLC1A3-202ENST00000381918 FGD5Q6ZNL6 1462 aa9.17□□□□□ -0.94
SLC1A3-202ENST00000381918 MAGI1Q96QZ7 1491 aaPredicted RBP9.17□□□□□ -0.94
SLC1A3-202ENST00000381918 KIF21BO75037 1637 aa9.16□□□□□ -0.94
SLC1A3-202ENST00000381918 RUSC2Q8N2Y8 1516 aa9.15□□□□□ -0.95
SLC1A3-202ENST00000381918 WRNQ14191 1432 aaPredicted RBP eCLIP9.11□□□□□ -0.95
SLC1A3-202ENST00000381918 ERCC6Q03468 1493 aa9.1□□□□□ -0.95
SLC1A3-202ENST00000381918 SAMD9Q5K651 1589 aa9.08□□□□□ -0.96
SLC1A3-202ENST00000381918 NUP160Q12769 1436 aa9.07□□□□□ -0.96
SLC1A3-202ENST00000381918 CEP170Q5SW79 1584 aa9.07□□□□□ -0.96
SLC1A3-202ENST00000381918 GRIN2BQ13224 1484 aa9.06□□□□□ -0.96
SLC1A3-202ENST00000381918 SYNJ2O15056 1496 aa9.04□□□□□ -0.96
SLC1A3-202ENST00000381918 ZNF608Q9ULD9 1512 aaPredicted RBP9.04□□□□□ -0.96
SLC1A3-202ENST00000381918 EEA1Q15075 1411 aa9.03□□□□□ -0.96
SLC1A3-202ENST00000381918 PRXQ9BXM0 1461 aa9.03□□□□□ -0.96
SLC1A3-202ENST00000381918 UGGT2Q9NYU1 1516 aa9.01□□□□□ -0.97
SLC1A3-202ENST00000381918 GAPVD1Q14C86 1478 aa9□□□□□ -0.97
SLC1A3-202ENST00000381918 SOGA1O94964 1423 aa8.98□□□□□ -0.97
SLC1A3-202ENST00000381918 RAD54L2Q9Y4B4 1467 aa8.98□□□□□ -0.97
SLC1A3-202ENST00000381918 GRIN2AQ12879 1464 aa8.98□□□□□ -0.97
SLC1A3-202ENST00000381918 FHAD1B1AJZ9 1412 aa8.97□□□□□ -0.97
SLC1A3-202ENST00000381918 SNAPC4Q5SXM2 1469 aa8.95□□□□□ -0.98
SLC1A3-202ENST00000381918 LRRIQ1Q96JM4 1722 aa8.94□□□□□ -0.98
SLC1A3-202ENST00000381918 RIMBP3CA6NJZ7 1639 aa8.94□□□□□ -0.98
SLC1A3-202ENST00000381918 RIMBP3BA6NNM3 1639 aa8.94□□□□□ -0.98
SLC1A3-202ENST00000381918 RIMBP3Q9UFD9 1639 aa8.94□□□□□ -0.98
SLC1A3-202ENST00000381918 KIAA0556O60303 1618 aa8.91□□□□□ -0.98
SLC1A3-202ENST00000381918 EFCAB5A4FU69 1503 aa8.91□□□□□ -0.98
SLC1A3-202ENST00000381918 IQGAP2Q13576 1575 aa8.91□□□□□ -0.98
SLC1A3-202ENST00000381918 UHRF1BP1LA0JNW5 1464 aa8.89□□□□□ -0.99
SLC1A3-202ENST00000381918 ADCY10Q96PN6 1610 aa8.89□□□□□ -0.99
SLC1A3-202ENST00000381918 IGF1RP08069 1367 aa8.89□□□□□ -0.99
SLC1A3-202ENST00000381918 KIF27Q86VH2 1401 aa8.89□□□□□ -0.99
SLC1A3-202ENST00000381918 KDM5BQ9UGL1 1544 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms