RNA–Protein interactions for RNA: ENST00000381653.9

NSFL1C-203, Transcript of NSFL1 cofactor, humanhuman

TSL 5

Gene NSFL1C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-203ENST00000381653 NISCHQ9Y2I1 1504 aa52.66■■■■■ 6.02
NSFL1C-203ENST00000381653 CCDC180Q9P1Z9 1646 aa46.76■■■■■ 5.08
NSFL1C-203ENST00000381653 ABCC9O60706 1549 aa45.4■■■■■ 4.86
NSFL1C-203ENST00000381653 ZCCHC6Q5VYS8 1495 aaKnown RBP43.94■■■■■ 4.62
NSFL1C-203ENST00000381653 NACADO15069 1562 aa43.84■■■■■ 4.61
NSFL1C-203ENST00000381653 RB1CC1Q8TDY2 1594 aa43.81■■■■■ 4.6
NSFL1C-203ENST00000381653 DCAF8L2P0C7V8 631 aa43.73■■■■■ 4.59
NSFL1C-203ENST00000381653 MYO15BQ96JP2 1530 aa43.69■■■■■ 4.59
NSFL1C-203ENST00000381653 DCAF1Q9Y4B6 1507 aa43.6■■■■■ 4.57
NSFL1C-203ENST00000381653 UNC13AQ9UPW8 1703 aa42.97■■■■■ 4.47
NSFL1C-203ENST00000381653 SCRIBQ14160 1630 aa42.63■■■■■ 4.42
NSFL1C-203ENST00000381653 BICRAQ9NZM4 1560 aa42.55■■■■■ 4.4
NSFL1C-203ENST00000381653 PABPN1Q86U42 306 aaKnown RBP eCLIP42.43■■■■■ 4.38
NSFL1C-203ENST00000381653 SHROOM4Q9ULL8 1493 aa42.07■■■■■ 4.33
NSFL1C-203ENST00000381653 DNAJC5BQ9UF47 199 aa41.8■■■■■ 4.28
NSFL1C-203ENST00000381653 EIF4G1Q04637 1599 aaKnown RBP41.37■■■■■ 4.21
NSFL1C-203ENST00000381653 CC2D2AQ9P2K1 1620 aa41.13■■■■■ 4.18
NSFL1C-203ENST00000381653 CECR2Q9BXF3 1484 aa40.99■■■■■ 4.15
NSFL1C-203ENST00000381653 SMARCA4P51532 1647 aa40.83■■■■■ 4.13
NSFL1C-203ENST00000381653 BAZ1AQ9NRL2 1556 aaPredicted RBP40.79■■■■■ 4.12
NSFL1C-203ENST00000381653 MROH2BQ7Z745 1585 aa40.59■■■■■ 4.09
NSFL1C-203ENST00000381653 ATAD2BQ9ULI0 1458 aa40.5■■■■■ 4.07
NSFL1C-203ENST00000381653 SMARCA2P51531 1590 aa40.47■■■■■ 4.07
NSFL1C-203ENST00000381653 PEG3Q9GZU2 1588 aa40.45■■■■■ 4.07
NSFL1C-203ENST00000381653 NCAPD3P42695 1498 aa40.43■■■■■ 4.06
NSFL1C-203ENST00000381653 HMGXB3Q12766 1538 aa40.3■■■■■ 4.04
NSFL1C-203ENST00000381653 RSF1Q96T23 1441 aaPredicted RBP40.2■■■■■ 4.03
NSFL1C-203ENST00000381653 WIZO95785 1651 aa40.2■■■■■ 4.03
NSFL1C-203ENST00000381653 BAZ1BQ9UIG0 1483 aaKnown RBP40.16■■■■■ 4.02
NSFL1C-203ENST00000381653 TOP2AP11388 1531 aaKnown RBP39.76■■■■□ 3.96
NSFL1C-203ENST00000381653 NESP48681 1621 aa39.4■■■■□ 3.9
NSFL1C-203ENST00000381653 LAMC3Q9Y6N6 1575 aa39.35■■■■□ 3.89
NSFL1C-203ENST00000381653 SUPT5HO00267 1087 aaKnown RBP39.29■■■■□ 3.88
NSFL1C-203ENST00000381653 CCDC88BA6NC98 1476 aa39.27■■■■□ 3.88
NSFL1C-203ENST00000381653 CADPSQ9ULU8 1353 aa39.24■■■■□ 3.87
NSFL1C-203ENST00000381653 ERCC6Q03468 1493 aa39.15■■■■□ 3.86
NSFL1C-203ENST00000381653 CFTRP13569 1480 aa39.1■■■■□ 3.85
NSFL1C-203ENST00000381653 KIF21AQ7Z4S6 1674 aa39.01■■■■□ 3.84
NSFL1C-203ENST00000381653 PDS5BQ9NTI5 1447 aa39.01■■■■□ 3.84
NSFL1C-203ENST00000381653 PRDM2Q13029 1718 aa38.95■■■■□ 3.83
NSFL1C-203ENST00000381653 FANCD2Q9BXW9 1451 aa38.8■■■■□ 3.8
NSFL1C-203ENST00000381653 THOC2Q8NI27 1593 aaKnown RBP38.79■■■■□ 3.8
NSFL1C-203ENST00000381653 CEP164Q9UPV0 1460 aa38.73■■■■□ 3.79
NSFL1C-203ENST00000381653 CUX2O14529 1486 aa38.63■■■■□ 3.77
NSFL1C-203ENST00000381653 MRC2Q9UBG0 1479 aa38.63■■■■□ 3.77
NSFL1C-203ENST00000381653 WDR62O43379 1518 aa38.53■■■■□ 3.76
NSFL1C-203ENST00000381653 URB2Q14146 1524 aaKnown RBP38.44■■■■□ 3.74
NSFL1C-203ENST00000381653 TOPBP1Q92547 1522 aa38.24■■■■□ 3.71
NSFL1C-203ENST00000381653 DNMBPQ6XZF7 1577 aa38.24■■■■□ 3.71
NSFL1C-203ENST00000381653 ABCC8Q09428 1581 aa38.22■■■■□ 3.71
NSFL1C-203ENST00000381653 CUX1P39880 1505 aa38.06■■■■□ 3.68
NSFL1C-203ENST00000381653 POLA1P09884 1462 aaPredicted RBP37.94■■■■□ 3.66
NSFL1C-203ENST00000381653 IFT140Q96RY7 1462 aa37.91■■■■□ 3.66
NSFL1C-203ENST00000381653 WRNQ14191 1432 aaPredicted RBP eCLIP37.87■■■■□ 3.65
NSFL1C-203ENST00000381653 FGD5Q6ZNL6 1462 aa37.87■■■■□ 3.65
NSFL1C-203ENST00000381653 TARBP1Q13395 1621 aaKnown RBP37.85■■■■□ 3.65
NSFL1C-203ENST00000381653 BIVM-ERCC5R4GMW8 1640 aa37.85■■■■□ 3.65
NSFL1C-203ENST00000381653 SYNJ1O43426 1573 aa37.83■■■■□ 3.65
NSFL1C-203ENST00000381653 TOP2BQ02880 1626 aa37.83■■■■□ 3.65
NSFL1C-203ENST00000381653 DNAJC5Q9H3Z4 198 aa37.79■■■■□ 3.64
NSFL1C-203ENST00000381653 RAD54L2Q9Y4B4 1467 aa37.75■■■■□ 3.63
NSFL1C-203ENST00000381653 ZNF608Q9ULD9 1512 aaPredicted RBP37.74■■■■□ 3.63
NSFL1C-203ENST00000381653 SOGA1O94964 1423 aa37.74■■■■□ 3.63
NSFL1C-203ENST00000381653 WDR97A6NE52 1622 aa37.64■■■■□ 3.62
NSFL1C-203ENST00000381653 EIF4G3O43432 1585 aaKnown RBP37.64■■■■□ 3.62
NSFL1C-203ENST00000381653 AQRO60306 1485 aaKnown RBP eCLIP37.53■■■■□ 3.67e-7■■□□□ 13.1
NSFL1C-203ENST00000381653 ABCA10Q8WWZ4 1543 aa37.53■■■■□ 3.6
NSFL1C-203ENST00000381653 TDRD9Q8NDG6 1382 aaKnown RBP37.48■■■■□ 3.59
NSFL1C-203ENST00000381653 ABCA5Q8WWZ7 1642 aa37.4■■■■□ 3.58
NSFL1C-203ENST00000381653 GAPVD1Q14C86 1478 aa37.33■■■■□ 3.57
NSFL1C-203ENST00000381653 PBRM1Q86U86 1689 aa37.32■■■■□ 3.57
NSFL1C-203ENST00000381653 GRIN2BQ13224 1484 aa37.29■■■■□ 3.56
NSFL1C-203ENST00000381653 SNAPC4Q5SXM2 1469 aa37.2■■■■□ 3.55
NSFL1C-203ENST00000381653 MAGI1Q96QZ7 1491 aaPredicted RBP37.17■■■■□ 3.54
NSFL1C-203ENST00000381653 CHD1O14646 1710 aa37.15■■■■□ 3.54
NSFL1C-203ENST00000381653 OSCARQ8IYS5 282 aa37.11■■■■□ 3.53
NSFL1C-203ENST00000381653 TRIM41Q8WV44 630 aa37.1■■■■□ 3.53
NSFL1C-203ENST00000381653 ERICH3Q5RHP9 1530 aa37.09■■■■□ 3.53
NSFL1C-203ENST00000381653 KIF27Q86VH2 1401 aa37.05■■■■□ 3.52
NSFL1C-203ENST00000381653 SYNJ2O15056 1496 aa37.02■■■■□ 3.52
NSFL1C-203ENST00000381653 ADAMTS12P58397 1594 aa37.01■■■■□ 3.51
NSFL1C-203ENST00000381653 FBLN2P98095 1184 aa37■■■■□ 3.51
NSFL1C-203ENST00000381653 CHMP7Q8WUX9 453 aaPredicted RBP36.92■■■■□ 3.5
NSFL1C-203ENST00000381653 FHAD1B1AJZ9 1412 aa36.9■■■■□ 3.5
NSFL1C-203ENST00000381653 IGF1RP08069 1367 aa36.88■■■■□ 3.49
NSFL1C-203ENST00000381653 CHIC1Q5VXU3 224 aa36.87■■■■□ 3.49
NSFL1C-203ENST00000381653 RUSC2Q8N2Y8 1516 aa36.85■■■■□ 3.49
NSFL1C-203ENST00000381653 CUL7Q14999 1698 aa36.83■■■■□ 3.49
NSFL1C-203ENST00000381653 GRIN2AQ12879 1464 aa36.82■■■■□ 3.49
NSFL1C-203ENST00000381653 CLASP1Q7Z460 1538 aa36.71■■■■□ 3.47
NSFL1C-203ENST00000381653 CEP170Q5SW79 1584 aa36.66■■■■□ 3.46
NSFL1C-203ENST00000381653 NUP160Q12769 1436 aa36.66■■■■□ 3.46
NSFL1C-203ENST00000381653 CARMIL1Q5VZK9 1371 aa36.65■■■■□ 3.46
NSFL1C-203ENST00000381653 EEA1Q15075 1411 aa36.52■■■■□ 3.44
NSFL1C-203ENST00000381653 RIMBP3CA6NJZ7 1639 aa36.51■■■■□ 3.43
NSFL1C-203ENST00000381653 RIMBP3BA6NNM3 1639 aa36.51■■■■□ 3.43
NSFL1C-203ENST00000381653 RIMBP3Q9UFD9 1639 aa36.51■■■■□ 3.43
NSFL1C-203ENST00000381653 ARHGEF11O15085 1522 aa36.48■■■■□ 3.43
NSFL1C-203ENST00000381653 RAPGEF2Q9Y4G8 1499 aa36.47■■■■□ 3.43
NSFL1C-203ENST00000381653 PRXQ9BXM0 1461 aa36.45■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms