RNA–Protein interactions for RNA: ENST00000381105.2

FAM239C-201, Transcript of family with sequence similarity 239 member C, humanhuman

TSL 5 BASIC

Gene FAM239C, Length 2,118 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239C-201ENST00000381105 NISCHQ9Y2I1 1504 aa26.82■■□□□ 1.88
FAM239C-201ENST00000381105 CCDC180Q9P1Z9 1646 aa23.45■■□□□ 1.35
FAM239C-201ENST00000381105 ABCC9O60706 1549 aa22.66■■□□□ 1.22
FAM239C-201ENST00000381105 ZCCHC6Q5VYS8 1495 aaKnown RBP22.47■■□□□ 1.19
FAM239C-201ENST00000381105 DCAF8L2P0C7V8 631 aa22.45■■□□□ 1.18
FAM239C-201ENST00000381105 CHIC1Q5VXU3 224 aa22.25■■□□□ 1.15
FAM239C-201ENST00000381105 DCAF1Q9Y4B6 1507 aa22.07■■□□□ 1.12
FAM239C-201ENST00000381105 NACADO15069 1562 aa21.93■■□□□ 1.1
FAM239C-201ENST00000381105 MYO15BQ96JP2 1530 aa21.9■■□□□ 1.1
FAM239C-201ENST00000381105 SHROOM4Q9ULL8 1493 aa21.88■■□□□ 1.09
FAM239C-201ENST00000381105 RB1CC1Q8TDY2 1594 aa21.85■■□□□ 1.09
FAM239C-201ENST00000381105 SCRIBQ14160 1630 aa21.7■■□□□ 1.06
FAM239C-201ENST00000381105 UNC13AQ9UPW8 1703 aa21.44■■□□□ 1.02
FAM239C-201ENST00000381105 AEBP2Q6ZN18 517 aaPredicted RBP21.37■■□□□ 1.01
FAM239C-201ENST00000381105 PABPN1Q86U42 306 aaKnown RBP eCLIP21.36■■□□□ 1.01
FAM239C-201ENST00000381105 BICRAQ9NZM4 1560 aa21.25■□□□□ 0.99
FAM239C-201ENST00000381105 CECR2Q9BXF3 1484 aa20.96■□□□□ 0.95
FAM239C-201ENST00000381105 SUPT5HO00267 1087 aaKnown RBP20.86■□□□□ 0.93
FAM239C-201ENST00000381105 MROH2BQ7Z745 1585 aa20.77■□□□□ 0.92
FAM239C-201ENST00000381105 RSF1Q96T23 1441 aaPredicted RBP20.73■□□□□ 0.91
FAM239C-201ENST00000381105 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
FAM239C-201ENST00000381105 SMARCA4P51532 1647 aa20.7■□□□□ 0.9
FAM239C-201ENST00000381105 EIF4G1Q04637 1599 aaKnown RBP20.64■□□□□ 0.89
FAM239C-201ENST00000381105 WIZO95785 1651 aa20.59■□□□□ 0.89
FAM239C-201ENST00000381105 ATAD2BQ9ULI0 1458 aa20.45■□□□□ 0.86
FAM239C-201ENST00000381105 CC2D2AQ9P2K1 1620 aa20.43■□□□□ 0.86
FAM239C-201ENST00000381105 PEG3Q9GZU2 1588 aa20.38■□□□□ 0.85
FAM239C-201ENST00000381105 SMARCA2P51531 1590 aa20.37■□□□□ 0.85
FAM239C-201ENST00000381105 BAZ1BQ9UIG0 1483 aaKnown RBP20.33■□□□□ 0.84
FAM239C-201ENST00000381105 DNAJC5BQ9UF47 199 aa20.32■□□□□ 0.84
FAM239C-201ENST00000381105 TOP2AP11388 1531 aaKnown RBP20.3■□□□□ 0.84
FAM239C-201ENST00000381105 NCAPD3P42695 1498 aa20.27■□□□□ 0.84
FAM239C-201ENST00000381105 HMGXB3Q12766 1538 aa20.2■□□□□ 0.82
FAM239C-201ENST00000381105 CCDC88BA6NC98 1476 aa20.13■□□□□ 0.81
FAM239C-201ENST00000381105 PHF23Q9BUL5 403 aaPredicted RBP19.84■□□□□ 0.77
FAM239C-201ENST00000381105 NESP48681 1621 aa19.81■□□□□ 0.76
FAM239C-201ENST00000381105 CADPSQ9ULU8 1353 aa19.77■□□□□ 0.76
FAM239C-201ENST00000381105 CFTRP13569 1480 aa19.76■□□□□ 0.75
FAM239C-201ENST00000381105 ABCC8Q09428 1581 aa19.68■□□□□ 0.74
FAM239C-201ENST00000381105 LAMC3Q9Y6N6 1575 aa19.62■□□□□ 0.73
FAM239C-201ENST00000381105 FANCD2Q9BXW9 1451 aa19.58■□□□□ 0.73
FAM239C-201ENST00000381105 PRDM2Q13029 1718 aa19.57■□□□□ 0.72
FAM239C-201ENST00000381105 TRIM41Q8WV44 630 aa19.55■□□□□ 0.72
FAM239C-201ENST00000381105 WRNQ14191 1432 aaPredicted RBP eCLIP19.51■□□□□ 0.71
FAM239C-201ENST00000381105 PDS5BQ9NTI5 1447 aa19.5■□□□□ 0.71
FAM239C-201ENST00000381105 KIF21AQ7Z4S6 1674 aa19.5■□□□□ 0.71
FAM239C-201ENST00000381105 SYNJ1O43426 1573 aa19.48■□□□□ 0.71
FAM239C-201ENST00000381105 CEP164Q9UPV0 1460 aa19.48■□□□□ 0.71
FAM239C-201ENST00000381105 CUX1P39880 1505 aa19.43■□□□□ 0.7
FAM239C-201ENST00000381105 ERCC6Q03468 1493 aa19.43■□□□□ 0.7
FAM239C-201ENST00000381105 URB2Q14146 1524 aaKnown RBP19.37■□□□□ 0.69
FAM239C-201ENST00000381105 TOP2BQ02880 1626 aa19.35■□□□□ 0.69
FAM239C-201ENST00000381105 TOPBP1Q92547 1522 aa19.32■□□□□ 0.68
FAM239C-201ENST00000381105 BIVM-ERCC5R4GMW8 1640 aa19.32■□□□□ 0.68
FAM239C-201ENST00000381105 FAM9AQ8IZU1 332 aaPredicted RBP19.31■□□□□ 0.68
FAM239C-201ENST00000381105 MRC2Q9UBG0 1479 aa19.3■□□□□ 0.68
FAM239C-201ENST00000381105 DNMBPQ6XZF7 1577 aa19.3■□□□□ 0.68
FAM239C-201ENST00000381105 FGD5Q6ZNL6 1462 aa19.28■□□□□ 0.68
FAM239C-201ENST00000381105 SOGA1O94964 1423 aa19.24■□□□□ 0.67
FAM239C-201ENST00000381105 THOC2Q8NI27 1593 aaKnown RBP19.23■□□□□ 0.67
FAM239C-201ENST00000381105 POLA1P09884 1462 aaPredicted RBP19.22■□□□□ 0.67
FAM239C-201ENST00000381105 RAD54L2Q9Y4B4 1467 aa19.21■□□□□ 0.67
FAM239C-201ENST00000381105 RUSC2Q8N2Y8 1516 aa19.2■□□□□ 0.66
FAM239C-201ENST00000381105 WDR62O43379 1518 aa19.19■□□□□ 0.66
FAM239C-201ENST00000381105 EHMT2Q96KQ7 1210 aa19.15■□□□□ 0.66
FAM239C-201ENST00000381105 CUX2O14529 1486 aa19.12■□□□□ 0.65
FAM239C-201ENST00000381105 TDRD9Q8NDG6 1382 aaKnown RBP19.06■□□□□ 0.64
FAM239C-201ENST00000381105 TARBP1Q13395 1621 aaKnown RBP19.04■□□□□ 0.64
FAM239C-201ENST00000381105 LOC105371045A0A1W2PR82 267 aa19.04■□□□□ 0.64
FAM239C-201ENST00000381105 ABCA10Q8WWZ4 1543 aa19.03■□□□□ 0.64
FAM239C-201ENST00000381105 KIF27Q86VH2 1401 aa19.02■□□□□ 0.64
FAM239C-201ENST00000381105 ZNF608Q9ULD9 1512 aaPredicted RBP19.02■□□□□ 0.63
FAM239C-201ENST00000381105 CSRNP3Q8WYN3 585 aa19■□□□□ 0.63
FAM239C-201ENST00000381105 WDR97A6NE52 1622 aa19■□□□□ 0.63
FAM239C-201ENST00000381105 IFT140Q96RY7 1462 aa18.99■□□□□ 0.63
FAM239C-201ENST00000381105 AQRO60306 1485 aaKnown RBP eCLIP18.98■□□□□ 0.63
FAM239C-201ENST00000381105 EEA1Q15075 1411 aa18.96■□□□□ 0.63
FAM239C-201ENST00000381105 GAPVD1Q14C86 1478 aa18.93■□□□□ 0.62
FAM239C-201ENST00000381105 ABCA5Q8WWZ7 1642 aa18.92■□□□□ 0.62
FAM239C-201ENST00000381105 IGF1RP08069 1367 aa18.91■□□□□ 0.62
FAM239C-201ENST00000381105 EIF4G3O43432 1585 aaKnown RBP18.89■□□□□ 0.61
FAM239C-201ENST00000381105 RAPGEF2Q9Y4G8 1499 aa18.84■□□□□ 0.61
FAM239C-201ENST00000381105 PBRM1Q86U86 1689 aa18.82■□□□□ 0.6
FAM239C-201ENST00000381105 PRXQ9BXM0 1461 aa18.81■□□□□ 0.6
FAM239C-201ENST00000381105 CARMIL1Q5VZK9 1371 aa18.81■□□□□ 0.6
FAM239C-201ENST00000381105 GRIN2BQ13224 1484 aa18.81■□□□□ 0.6
FAM239C-201ENST00000381105 UBTFP17480 764 aaKnown RBP18.79■□□□□ 0.6
FAM239C-201ENST00000381105 ERICH3Q5RHP9 1530 aa18.79■□□□□ 0.6
FAM239C-201ENST00000381105 KIF21BO75037 1637 aa18.78■□□□□ 0.6
FAM239C-201ENST00000381105 SNAPC4Q5SXM2 1469 aa18.77■□□□□ 0.6
FAM239C-201ENST00000381105 GOLGA3Q08378 1498 aa18.77■□□□□ 0.6
FAM239C-201ENST00000381105 RANGAP1P46060 587 aaPredicted RBP18.73■□□□□ 0.59
FAM239C-201ENST00000381105 PLPPR3Q6T4P5 718 aa18.73■□□□□ 0.59
FAM239C-201ENST00000381105 CUL7Q14999 1698 aa18.73■□□□□ 0.59
FAM239C-201ENST00000381105 FBLN2P98095 1184 aa18.71■□□□□ 0.59
FAM239C-201ENST00000381105 ADAMTS12P58397 1594 aa18.71■□□□□ 0.59
FAM239C-201ENST00000381105 FHAD1B1AJZ9 1412 aa18.69■□□□□ 0.58
FAM239C-201ENST00000381105 MAGI1Q96QZ7 1491 aaPredicted RBP18.66■□□□□ 0.58
FAM239C-201ENST00000381105 CHMP7Q8WUX9 453 aaPredicted RBP18.64■□□□□ 0.57
FAM239C-201ENST00000381105 TNIKQ9UKE5 1360 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms