RNA–Protein interactions for RNA: ENST00000380578.1

TRAPPC2-202, Transcript of trafficking protein particle complex 2, humanhuman

TSL 5

Gene TRAPPC2, Length 3,108 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-202ENST00000380578 NISCHQ9Y2I1 1504 aa13.89□□□□□ -0.19
TRAPPC2-202ENST00000380578 CCDC180Q9P1Z9 1646 aa12.09□□□□□ -0.47
TRAPPC2-202ENST00000380578 ZCCHC6Q5VYS8 1495 aaKnown RBP11.64□□□□□ -0.55
TRAPPC2-202ENST00000380578 ABCC9O60706 1549 aa11.63□□□□□ -0.55
TRAPPC2-202ENST00000380578 DCAF8L2P0C7V8 631 aa11.58□□□□□ -0.56
TRAPPC2-202ENST00000380578 DCAF1Q9Y4B6 1507 aa11.44□□□□□ -0.58
TRAPPC2-202ENST00000380578 SHROOM4Q9ULL8 1493 aa11.34□□□□□ -0.59
TRAPPC2-202ENST00000380578 MYO15BQ96JP2 1530 aa11.33□□□□□ -0.6
TRAPPC2-202ENST00000380578 NACADO15069 1562 aa11.31□□□□□ -0.6
TRAPPC2-202ENST00000380578 RB1CC1Q8TDY2 1594 aa11.23□□□□□ -0.61
TRAPPC2-202ENST00000380578 SCRIBQ14160 1630 aa11.18□□□□□ -0.62
TRAPPC2-202ENST00000380578 UNC13AQ9UPW8 1703 aa11.04□□□□□ -0.64
TRAPPC2-202ENST00000380578 PABPN1Q86U42 306 aaKnown RBP eCLIP10.99□□□□□ -0.65
TRAPPC2-202ENST00000380578 BICRAQ9NZM4 1560 aa10.96□□□□□ -0.65
TRAPPC2-202ENST00000380578 CECR2Q9BXF3 1484 aa10.86□□□□□ -0.67
TRAPPC2-202ENST00000380578 SUPT5HO00267 1087 aaKnown RBP10.85□□□□□ -0.67
TRAPPC2-202ENST00000380578 RSF1Q96T23 1441 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC2-202ENST00000380578 MROH2BQ7Z745 1585 aa10.76□□□□□ -0.69
TRAPPC2-202ENST00000380578 BAZ1AQ9NRL2 1556 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC2-202ENST00000380578 SMARCA4P51532 1647 aa10.69□□□□□ -0.7
TRAPPC2-202ENST00000380578 WIZO95785 1651 aa10.66□□□□□ -0.7
TRAPPC2-202ENST00000380578 EIF4G1Q04637 1599 aaKnown RBP10.61□□□□□ -0.71
TRAPPC2-202ENST00000380578 HRCP23327 699 aa10.58□□□□□ -0.72
TRAPPC2-202ENST00000380578 ATAD2BQ9ULI0 1458 aa10.56□□□□□ -0.72
TRAPPC2-202ENST00000380578 PEG3Q9GZU2 1588 aa10.54□□□□□ -0.72
TRAPPC2-202ENST00000380578 TOP2AP11388 1531 aaKnown RBP10.51□□□□□ -0.73
TRAPPC2-202ENST00000380578 SMARCA2P51531 1590 aa10.5□□□□□ -0.73
TRAPPC2-202ENST00000380578 CC2D2AQ9P2K1 1620 aa10.49□□□□□ -0.73
TRAPPC2-202ENST00000380578 NCAPD3P42695 1498 aa10.47□□□□□ -0.73
TRAPPC2-202ENST00000380578 BAZ1BQ9UIG0 1483 aaKnown RBP10.47□□□□□ -0.73
TRAPPC2-202ENST00000380578 CCDC88BA6NC98 1476 aa10.45□□□□□ -0.74
TRAPPC2-202ENST00000380578 DNAJC5BQ9UF47 199 aa10.43□□□□□ -0.74
TRAPPC2-202ENST00000380578 HMGXB3Q12766 1538 aa10.41□□□□□ -0.74
TRAPPC2-202ENST00000380578 CHIC1Q5VXU3 224 aa10.33□□□□□ -0.76
TRAPPC2-202ENST00000380578 PELP1Q8IZL8 1130 aaKnown RBP10.28□□□□□ -0.76
TRAPPC2-202ENST00000380578 CFTRP13569 1480 aa10.21□□□□□ -0.77
TRAPPC2-202ENST00000380578 PCGF6Q9BYE7 350 aa10.2□□□□□ -0.78
TRAPPC2-202ENST00000380578 CADPSQ9ULU8 1353 aa10.2□□□□□ -0.78
TRAPPC2-202ENST00000380578 ABCC8Q09428 1581 aa10.2□□□□□ -0.78
TRAPPC2-202ENST00000380578 NESP48681 1621 aa10.2□□□□□ -0.78
TRAPPC2-202ENST00000380578 PPARGC1BQ86YN6 1023 aaKnown RBP10.2□□□□□ -0.78
TRAPPC2-202ENST00000380578 TRIM41Q8WV44 630 aa10.17□□□□□ -0.78
TRAPPC2-202ENST00000380578 WRNQ14191 1432 aaPredicted RBP eCLIP10.11□□□□□ -0.79
TRAPPC2-202ENST00000380578 LAMC3Q9Y6N6 1575 aa10.1□□□□□ -0.79
TRAPPC2-202ENST00000380578 PRDM2Q13029 1718 aa10.09□□□□□ -0.79
TRAPPC2-202ENST00000380578 SYNJ1O43426 1573 aa10.09□□□□□ -0.79
TRAPPC2-202ENST00000380578 FANCD2Q9BXW9 1451 aa10.09□□□□□ -0.79
TRAPPC2-202ENST00000380578 CUX1P39880 1505 aa10.06□□□□□ -0.8
TRAPPC2-202ENST00000380578 FAM9AQ8IZU1 332 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC2-202ENST00000380578 PDS5BQ9NTI5 1447 aa10.03□□□□□ -0.8
TRAPPC2-202ENST00000380578 TOP2BQ02880 1626 aa10.02□□□□□ -0.8
TRAPPC2-202ENST00000380578 KIF21AQ7Z4S6 1674 aa10.02□□□□□ -0.81
TRAPPC2-202ENST00000380578 TRIM26Q12899 539 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC2-202ENST00000380578 CEP164Q9UPV0 1460 aa10.01□□□□□ -0.81
TRAPPC2-202ENST00000380578 BIVM-ERCC5R4GMW8 1640 aa10.01□□□□□ -0.81
TRAPPC2-202ENST00000380578 SOGA1O94964 1423 aa10.01□□□□□ -0.81
TRAPPC2-202ENST00000380578 RUSC2Q8N2Y8 1516 aa10□□□□□ -0.81
TRAPPC2-202ENST00000380578 ZEB1P37275 1124 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC2-202ENST00000380578 URB2Q14146 1524 aaKnown RBP9.99□□□□□ -0.81
TRAPPC2-202ENST00000380578 LOC105371045A0A1W2PR82 267 aa9.98□□□□□ -0.81
TRAPPC2-202ENST00000380578 TOPBP1Q92547 1522 aa9.97□□□□□ -0.81
TRAPPC2-202ENST00000380578 SCAF1Q9H7N4 1312 aaKnown RBP9.96□□□□□ -0.81
TRAPPC2-202ENST00000380578 DNMBPQ6XZF7 1577 aa9.95□□□□□ -0.82
TRAPPC2-202ENST00000380578 FGD5Q6ZNL6 1462 aa9.95□□□□□ -0.82
TRAPPC2-202ENST00000380578 EHMT2Q96KQ7 1210 aa9.94□□□□□ -0.82
TRAPPC2-202ENST00000380578 ERCC6Q03468 1493 aa9.93□□□□□ -0.82
TRAPPC2-202ENST00000380578 RAD54L2Q9Y4B4 1467 aa9.93□□□□□ -0.82
TRAPPC2-202ENST00000380578 MRC2Q9UBG0 1479 aa9.92□□□□□ -0.82
TRAPPC2-202ENST00000380578 MYT1Q01538 1121 aa9.92□□□□□ -0.82
TRAPPC2-202ENST00000380578 POLA1P09884 1462 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC2-202ENST00000380578 CSRNP3Q8WYN3 585 aa9.89□□□□□ -0.83
TRAPPC2-202ENST00000380578 THOC2Q8NI27 1593 aaKnown RBP9.88□□□□□ -0.83
TRAPPC2-202ENST00000380578 WDR62O43379 1518 aa9.87□□□□□ -0.83
TRAPPC2-202ENST00000380578 CUX2O14529 1486 aa9.87□□□□□ -0.83
TRAPPC2-202ENST00000380578 EEA1Q15075 1411 aa9.85□□□□□ -0.83
TRAPPC2-202ENST00000380578 AEBP2Q6ZN18 517 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC2-202ENST00000380578 KIF27Q86VH2 1401 aa9.84□□□□□ -0.83
TRAPPC2-202ENST00000380578 ABCA10Q8WWZ4 1543 aa9.84□□□□□ -0.83
TRAPPC2-202ENST00000380578 TDRD9Q8NDG6 1382 aaKnown RBP9.84□□□□□ -0.83
TRAPPC2-202ENST00000380578 TARBP1Q13395 1621 aaKnown RBP9.83□□□□□ -0.84
TRAPPC2-202ENST00000380578 IGF1RP08069 1367 aa9.82□□□□□ -0.84
TRAPPC2-202ENST00000380578 WDR97A6NE52 1622 aa9.81□□□□□ -0.84
TRAPPC2-202ENST00000380578 ZNF608Q9ULD9 1512 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC2-202ENST00000380578 AQRO60306 1485 aaKnown RBP eCLIP9.79□□□□□ -0.84
TRAPPC2-202ENST00000380578 RAPGEF2Q9Y4G8 1499 aa9.78□□□□□ -0.84
TRAPPC2-202ENST00000380578 IFT140Q96RY7 1462 aa9.78□□□□□ -0.84
TRAPPC2-202ENST00000380578 PRXQ9BXM0 1461 aa9.78□□□□□ -0.84
TRAPPC2-202ENST00000380578 GAPVD1Q14C86 1478 aa9.77□□□□□ -0.85
TRAPPC2-202ENST00000380578 ABCA5Q8WWZ7 1642 aa9.76□□□□□ -0.85
TRAPPC2-202ENST00000380578 KIF21BO75037 1637 aa9.76□□□□□ -0.85
TRAPPC2-202ENST00000380578 UBTFP17480 764 aaKnown RBP9.76□□□□□ -0.85
TRAPPC2-202ENST00000380578 CARMIL1Q5VZK9 1371 aa9.75□□□□□ -0.85
TRAPPC2-202ENST00000380578 GOLGA3Q08378 1498 aa9.75□□□□□ -0.85
TRAPPC2-202ENST00000380578 ACIN1Q9UKV3 1341 aaKnown RBP9.74□□□□□ -0.85
TRAPPC2-202ENST00000380578 TNIKQ9UKE5 1360 aa9.72□□□□□ -0.85
TRAPPC2-202ENST00000380578 ERICH3Q5RHP9 1530 aa9.71□□□□□ -0.86
TRAPPC2-202ENST00000380578 EIF4G3O43432 1585 aaKnown RBP9.7□□□□□ -0.86
TRAPPC2-202ENST00000380578 PBRM1Q86U86 1689 aa9.7□□□□□ -0.86
TRAPPC2-202ENST00000380578 GRIN2BQ13224 1484 aa9.69□□□□□ -0.86
TRAPPC2-202ENST00000380578 RANGAP1P46060 587 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms