RNA–Protein interactions for RNA: ENST00000380491.7

C12orf54-202, Transcript of chromosome 12 open reading frame 54, humanhuman

TSL 1 (best)

Gene C12orf54, Length 820 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54-202ENST00000380491 NISCHQ9Y2I1 1504 aa24.2■■□□□ 1.47
C12orf54-202ENST00000380491 CCDC180Q9P1Z9 1646 aa21.44■■□□□ 1.02
C12orf54-202ENST00000380491 AEBP2Q6ZN18 517 aaPredicted RBP20.99■□□□□ 0.95
C12orf54-202ENST00000380491 ABCC9O60706 1549 aa20.81■□□□□ 0.92
C12orf54-202ENST00000380491 CHIC1Q5VXU3 224 aa20.21■□□□□ 0.83
C12orf54-202ENST00000380491 ZCCHC6Q5VYS8 1495 aaKnown RBP20.19■□□□□ 0.82
C12orf54-202ENST00000380491 DCAF8L2P0C7V8 631 aa20.14■□□□□ 0.81
C12orf54-202ENST00000380491 NACADO15069 1562 aa20.12■□□□□ 0.81
C12orf54-202ENST00000380491 RB1CC1Q8TDY2 1594 aa20.09■□□□□ 0.81
C12orf54-202ENST00000380491 MYO15BQ96JP2 1530 aa20.06■□□□□ 0.8
C12orf54-202ENST00000380491 DCAF1Q9Y4B6 1507 aa20.04■□□□□ 0.8
C12orf54-202ENST00000380491 UNC13AQ9UPW8 1703 aa19.67■□□□□ 0.74
C12orf54-202ENST00000380491 SCRIBQ14160 1630 aa19.57■□□□□ 0.72
C12orf54-202ENST00000380491 BICRAQ9NZM4 1560 aa19.51■□□□□ 0.71
C12orf54-202ENST00000380491 PABPN1Q86U42 306 aaKnown RBP eCLIP19.48■□□□□ 0.71
C12orf54-202ENST00000380491 SHROOM4Q9ULL8 1493 aa19.28■□□□□ 0.68
C12orf54-202ENST00000380491 DNAJC5BQ9UF47 199 aa18.99■□□□□ 0.63
C12orf54-202ENST00000380491 EIF4G1Q04637 1599 aaKnown RBP18.96■□□□□ 0.63
C12orf54-202ENST00000380491 CC2D2AQ9P2K1 1620 aa18.85■□□□□ 0.61
C12orf54-202ENST00000380491 CECR2Q9BXF3 1484 aa18.84■□□□□ 0.61
C12orf54-202ENST00000380491 SMARCA4P51532 1647 aa18.74■□□□□ 0.59
C12orf54-202ENST00000380491 BAZ1AQ9NRL2 1556 aaPredicted RBP18.74■□□□□ 0.59
C12orf54-202ENST00000380491 MROH2BQ7Z745 1585 aa18.66■□□□□ 0.58
C12orf54-202ENST00000380491 ATAD2BQ9ULI0 1458 aa18.6■□□□□ 0.57
C12orf54-202ENST00000380491 SMARCA2P51531 1590 aa18.58■□□□□ 0.56
C12orf54-202ENST00000380491 NCAPD3P42695 1498 aa18.58■□□□□ 0.56
C12orf54-202ENST00000380491 PEG3Q9GZU2 1588 aa18.56■□□□□ 0.56
C12orf54-202ENST00000380491 RSF1Q96T23 1441 aaPredicted RBP18.5■□□□□ 0.55
C12orf54-202ENST00000380491 HMGXB3Q12766 1538 aa18.49■□□□□ 0.55
C12orf54-202ENST00000380491 WIZO95785 1651 aa18.47■□□□□ 0.55
C12orf54-202ENST00000380491 BAZ1BQ9UIG0 1483 aaKnown RBP18.45■□□□□ 0.54
C12orf54-202ENST00000380491 TOP2AP11388 1531 aaKnown RBP18.27■□□□□ 0.51
C12orf54-202ENST00000380491 SUPT5HO00267 1087 aaKnown RBP18.14■□□□□ 0.49
C12orf54-202ENST00000380491 NESP48681 1621 aa18.07■□□□□ 0.48
C12orf54-202ENST00000380491 CCDC88BA6NC98 1476 aa18.07■□□□□ 0.48
C12orf54-202ENST00000380491 LAMC3Q9Y6N6 1575 aa18.04■□□□□ 0.48
C12orf54-202ENST00000380491 CADPSQ9ULU8 1353 aa18.04■□□□□ 0.48
C12orf54-202ENST00000380491 SENP3Q9H4L4 574 aaPredicted RBP17.99■□□□□ 0.47
C12orf54-202ENST00000380491 CFTRP13569 1480 aa17.96■□□□□ 0.47
C12orf54-202ENST00000380491 PDS5BQ9NTI5 1447 aa17.91■□□□□ 0.46
C12orf54-202ENST00000380491 ERCC6Q03468 1493 aa17.9■□□□□ 0.46
C12orf54-202ENST00000380491 KIF21AQ7Z4S6 1674 aa17.86■□□□□ 0.45
C12orf54-202ENST00000380491 PRDM2Q13029 1718 aa17.84■□□□□ 0.45
C12orf54-202ENST00000380491 FANCD2Q9BXW9 1451 aa17.82■□□□□ 0.44
C12orf54-202ENST00000380491 DNAJC5Q9H3Z4 198 aa17.79■□□□□ 0.44
C12orf54-202ENST00000380491 CEP164Q9UPV0 1460 aa17.77■□□□□ 0.44
C12orf54-202ENST00000380491 PHF23Q9BUL5 403 aaPredicted RBP17.77■□□□□ 0.44
C12orf54-202ENST00000380491 THOC2Q8NI27 1593 aaKnown RBP17.75■□□□□ 0.43
C12orf54-202ENST00000380491 MRC2Q9UBG0 1479 aa17.71■□□□□ 0.43
C12orf54-202ENST00000380491 CUX2O14529 1486 aa17.67■□□□□ 0.42
C12orf54-202ENST00000380491 WDR62O43379 1518 aa17.67■□□□□ 0.42
C12orf54-202ENST00000380491 URB2Q14146 1524 aaKnown RBP17.63■□□□□ 0.41
C12orf54-202ENST00000380491 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
C12orf54-202ENST00000380491 TOPBP1Q92547 1522 aa17.56■□□□□ 0.4
C12orf54-202ENST00000380491 DNMBPQ6XZF7 1577 aa17.54■□□□□ 0.4
C12orf54-202ENST00000380491 CUX1P39880 1505 aa17.49■□□□□ 0.39
C12orf54-202ENST00000380491 WRNQ14191 1432 aaPredicted RBP eCLIP17.43■□□□□ 0.38
C12orf54-202ENST00000380491 POLA1P09884 1462 aaPredicted RBP17.42■□□□□ 0.38
C12orf54-202ENST00000380491 FGD5Q6ZNL6 1462 aa17.4■□□□□ 0.38
C12orf54-202ENST00000380491 IFT140Q96RY7 1462 aa17.39■□□□□ 0.37
C12orf54-202ENST00000380491 SYNJ1O43426 1573 aa17.39■□□□□ 0.37
C12orf54-202ENST00000380491 TOP2BQ02880 1626 aa17.39■□□□□ 0.37
C12orf54-202ENST00000380491 BIVM-ERCC5R4GMW8 1640 aa17.38■□□□□ 0.37
C12orf54-202ENST00000380491 TARBP1Q13395 1621 aaKnown RBP17.36■□□□□ 0.37
C12orf54-202ENST00000380491 SOGA1O94964 1423 aa17.36■□□□□ 0.37
C12orf54-202ENST00000380491 RAD54L2Q9Y4B4 1467 aa17.35■□□□□ 0.37
C12orf54-202ENST00000380491 ZNF608Q9ULD9 1512 aaPredicted RBP17.31■□□□□ 0.36
C12orf54-202ENST00000380491 WDR97A6NE52 1622 aa17.25■□□□□ 0.35
C12orf54-202ENST00000380491 AQRO60306 1485 aaKnown RBP eCLIP17.24■□□□□ 0.35
C12orf54-202ENST00000380491 EIF4G3O43432 1585 aaKnown RBP17.24■□□□□ 0.35
C12orf54-202ENST00000380491 ABCA10Q8WWZ4 1543 aa17.24■□□□□ 0.35
C12orf54-202ENST00000380491 TDRD9Q8NDG6 1382 aaKnown RBP17.23■□□□□ 0.35
C12orf54-202ENST00000380491 ABCA5Q8WWZ7 1642 aa17.16■□□□□ 0.34
C12orf54-202ENST00000380491 GAPVD1Q14C86 1478 aa17.15■□□□□ 0.34
C12orf54-202ENST00000380491 TRIM41Q8WV44 630 aa17.14■□□□□ 0.33
C12orf54-202ENST00000380491 GRIN2BQ13224 1484 aa17.12■□□□□ 0.33
C12orf54-202ENST00000380491 PBRM1Q86U86 1689 aa17.1■□□□□ 0.33
C12orf54-202ENST00000380491 SNAPC4Q5SXM2 1469 aa17.07■□□□□ 0.32
C12orf54-202ENST00000380491 MAGI1Q96QZ7 1491 aaPredicted RBP17.06■□□□□ 0.32
C12orf54-202ENST00000380491 KIF27Q86VH2 1401 aa17.05■□□□□ 0.32
C12orf54-202ENST00000380491 ERICH3Q5RHP9 1530 aa17.04■□□□□ 0.32
C12orf54-202ENST00000380491 CHD1O14646 1710 aa17.01■□□□□ 0.31
C12orf54-202ENST00000380491 SYNJ2O15056 1496 aa16.99■□□□□ 0.31
C12orf54-202ENST00000380491 FBLN2P98095 1184 aa16.98■□□□□ 0.31
C12orf54-202ENST00000380491 OSCARQ8IYS5 282 aa16.98■□□□□ 0.31
C12orf54-202ENST00000380491 IGF1RP08069 1367 aa16.98■□□□□ 0.31
C12orf54-202ENST00000380491 ADAMTS12P58397 1594 aa16.98■□□□□ 0.31
C12orf54-202ENST00000380491 RUSC2Q8N2Y8 1516 aa16.97■□□□□ 0.31
C12orf54-202ENST00000380491 CHMP7Q8WUX9 453 aaPredicted RBP16.97■□□□□ 0.31
C12orf54-202ENST00000380491 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.3
C12orf54-202ENST00000380491 GRIN2AQ12879 1464 aa16.91■□□□□ 0.3
C12orf54-202ENST00000380491 CUL7Q14999 1698 aa16.91■□□□□ 0.3
C12orf54-202ENST00000380491 CARMIL1Q5VZK9 1371 aa16.88■□□□□ 0.29
C12orf54-202ENST00000380491 EEA1Q15075 1411 aa16.84■□□□□ 0.29
C12orf54-202ENST00000380491 NUP160Q12769 1436 aa16.83■□□□□ 0.28
C12orf54-202ENST00000380491 CLASP1Q7Z460 1538 aa16.83■□□□□ 0.28
C12orf54-202ENST00000380491 CEP170Q5SW79 1584 aa16.82■□□□□ 0.28
C12orf54-202ENST00000380491 CSRNP3Q8WYN3 585 aa16.81■□□□□ 0.28
C12orf54-202ENST00000380491 RAPGEF2Q9Y4G8 1499 aa16.79■□□□□ 0.28
C12orf54-202ENST00000380491 PRXQ9BXM0 1461 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms