RNA–Protein interactions for RNA: ENST00000380315.2

HBB-202, Transcript of hemoglobin subunit beta, humanhuman

TSL 5

Gene HBB, Length 502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HBB-202ENST00000380315 NISCHQ9Y2I1 1504 aa27.29■■□□□ 1.96
HBB-202ENST00000380315 CHIC1Q5VXU3 224 aa25.93■■□□□ 1.74
HBB-202ENST00000380315 AEBP2Q6ZN18 517 aaPredicted RBP25.91■■□□□ 1.74
HBB-202ENST00000380315 CCDC180Q9P1Z9 1646 aa24.2■■□□□ 1.46
HBB-202ENST00000380315 ABCC9O60706 1549 aa23.71■■□□□ 1.39
HBB-202ENST00000380315 ZCCHC6Q5VYS8 1495 aaKnown RBP22.77■■□□□ 1.24
HBB-202ENST00000380315 DCAF8L2P0C7V8 631 aa22.76■■□□□ 1.23
HBB-202ENST00000380315 RB1CC1Q8TDY2 1594 aa22.76■■□□□ 1.23
HBB-202ENST00000380315 PHF23Q9BUL5 403 aaPredicted RBP22.74■■□□□ 1.23
HBB-202ENST00000380315 NACADO15069 1562 aa22.74■■□□□ 1.23
HBB-202ENST00000380315 MYO15BQ96JP2 1530 aa22.61■■□□□ 1.21
HBB-202ENST00000380315 DCAF1Q9Y4B6 1507 aa22.54■■□□□ 1.2
HBB-202ENST00000380315 UNC13AQ9UPW8 1703 aa22.26■■□□□ 1.15
HBB-202ENST00000380315 PABPN1Q86U42 306 aaKnown RBP eCLIP22.17■■□□□ 1.14
HBB-202ENST00000380315 SCRIBQ14160 1630 aa22.17■■□□□ 1.14
HBB-202ENST00000380315 BICRAQ9NZM4 1560 aa22.13■■□□□ 1.13
HBB-202ENST00000380315 SENP3Q9H4L4 574 aaPredicted RBP22.11■■□□□ 1.13
HBB-202ENST00000380315 SHROOM4Q9ULL8 1493 aa21.82■■□□□ 1.08
HBB-202ENST00000380315 DNAJC5BQ9UF47 199 aa21.73■■□□□ 1.07
HBB-202ENST00000380315 EIF4G1Q04637 1599 aaKnown RBP21.53■■□□□ 1.04
HBB-202ENST00000380315 CC2D2AQ9P2K1 1620 aa21.41■■□□□ 1.02
HBB-202ENST00000380315 PLPPR3Q6T4P5 718 aa21.38■■□□□ 1.01
HBB-202ENST00000380315 CECR2Q9BXF3 1484 aa21.3■■□□□ 1
HBB-202ENST00000380315 SMARCA4P51532 1647 aa21.17■□□□□ 0.98
HBB-202ENST00000380315 BAZ1AQ9NRL2 1556 aaPredicted RBP21.13■□□□□ 0.97
HBB-202ENST00000380315 MROH2BQ7Z745 1585 aa21.07■□□□□ 0.96
HBB-202ENST00000380315 ATAD2BQ9ULI0 1458 aa21.05■□□□□ 0.96
HBB-202ENST00000380315 NCAPD3P42695 1498 aa21■□□□□ 0.95
HBB-202ENST00000380315 SMARCA2P51531 1590 aa20.99■□□□□ 0.95
HBB-202ENST00000380315 PEG3Q9GZU2 1588 aa20.94■□□□□ 0.94
HBB-202ENST00000380315 HMGXB3Q12766 1538 aa20.91■□□□□ 0.94
HBB-202ENST00000380315 BAZ1BQ9UIG0 1483 aaKnown RBP20.87■□□□□ 0.93
HBB-202ENST00000380315 RSF1Q96T23 1441 aaPredicted RBP20.84■□□□□ 0.93
HBB-202ENST00000380315 WIZO95785 1651 aa20.83■□□□□ 0.92
HBB-202ENST00000380315 TOP2AP11388 1531 aaKnown RBP20.6■□□□□ 0.89
HBB-202ENST00000380315 NESP48681 1621 aa20.54■□□□□ 0.88
HBB-202ENST00000380315 LAMC3Q9Y6N6 1575 aa20.42■□□□□ 0.86
HBB-202ENST00000380315 ERCC6Q03468 1493 aa20.39■□□□□ 0.85
HBB-202ENST00000380315 CADPSQ9ULU8 1353 aa20.39■□□□□ 0.85
HBB-202ENST00000380315 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
HBB-202ENST00000380315 FOXD1Q16676 465 aa20.34■□□□□ 0.85
HBB-202ENST00000380315 SUPT5HO00267 1087 aaKnown RBP20.33■□□□□ 0.85
HBB-202ENST00000380315 CFTRP13569 1480 aa20.3■□□□□ 0.84
HBB-202ENST00000380315 PDS5BQ9NTI5 1447 aa20.27■□□□□ 0.84
HBB-202ENST00000380315 KIF21AQ7Z4S6 1674 aa20.26■□□□□ 0.83
HBB-202ENST00000380315 THOC2Q8NI27 1593 aaKnown RBP20.2■□□□□ 0.82
HBB-202ENST00000380315 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
HBB-202ENST00000380315 CEP164Q9UPV0 1460 aa20.14■□□□□ 0.81
HBB-202ENST00000380315 CUX2O14529 1486 aa20.13■□□□□ 0.81
HBB-202ENST00000380315 MRC2Q9UBG0 1479 aa20.11■□□□□ 0.81
HBB-202ENST00000380315 PRDM2Q13029 1718 aa20.09■□□□□ 0.81
HBB-202ENST00000380315 WDR62O43379 1518 aa20.05■□□□□ 0.8
HBB-202ENST00000380315 URB2Q14146 1524 aaKnown RBP20.01■□□□□ 0.79
HBB-202ENST00000380315 ADRA2BP18089 450 aa19.99■□□□□ 0.79
HBB-202ENST00000380315 PPP6R1Q9UPN7 881 aa19.9■□□□□ 0.78
HBB-202ENST00000380315 TOPBP1Q92547 1522 aa19.86■□□□□ 0.77
HBB-202ENST00000380315 DNMBPQ6XZF7 1577 aa19.84■□□□□ 0.77
HBB-202ENST00000380315 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
HBB-202ENST00000380315 CUX1P39880 1505 aa19.76■□□□□ 0.75
HBB-202ENST00000380315 POLA1P09884 1462 aaPredicted RBP19.71■□□□□ 0.75
HBB-202ENST00000380315 IFT140Q96RY7 1462 aa19.71■□□□□ 0.75
HBB-202ENST00000380315 FGD5Q6ZNL6 1462 aa19.67■□□□□ 0.74
HBB-202ENST00000380315 ZNF608Q9ULD9 1512 aaPredicted RBP19.67■□□□□ 0.74
HBB-202ENST00000380315 TARBP1Q13395 1621 aaKnown RBP19.65■□□□□ 0.74
HBB-202ENST00000380315 RAD54L2Q9Y4B4 1467 aa19.64■□□□□ 0.73
HBB-202ENST00000380315 WRNQ14191 1432 aaPredicted RBP eCLIP19.62■□□□□ 0.73
HBB-202ENST00000380315 SYNJ1O43426 1573 aa19.61■□□□□ 0.73
HBB-202ENST00000380315 SOGA1O94964 1423 aa19.59■□□□□ 0.73
HBB-202ENST00000380315 EIF4G3O43432 1585 aaKnown RBP19.57■□□□□ 0.72
HBB-202ENST00000380315 TOP2BQ02880 1626 aa19.57■□□□□ 0.72
HBB-202ENST00000380315 BIVM-ERCC5R4GMW8 1640 aa19.56■□□□□ 0.72
HBB-202ENST00000380315 AQRO60306 1485 aaKnown RBP eCLIP19.54■□□□□ 0.72
HBB-202ENST00000380315 TDRD9Q8NDG6 1382 aaKnown RBP19.52■□□□□ 0.72
HBB-202ENST00000380315 WDR97A6NE52 1622 aa19.5■□□□□ 0.71
HBB-202ENST00000380315 ABCA10Q8WWZ4 1543 aa19.46■□□□□ 0.71
HBB-202ENST00000380315 DNAJC5Q9H3Z4 198 aa19.45■□□□□ 0.7
HBB-202ENST00000380315 PIAS4Q8N2W9 510 aaPredicted RBP19.42■□□□□ 0.7
HBB-202ENST00000380315 ABCA5Q8WWZ7 1642 aa19.4■□□□□ 0.7
HBB-202ENST00000380315 GAPVD1Q14C86 1478 aa19.38■□□□□ 0.69
HBB-202ENST00000380315 GRIN2BQ13224 1484 aa19.37■□□□□ 0.69
HBB-202ENST00000380315 SNAPC4Q5SXM2 1469 aa19.37■□□□□ 0.69
HBB-202ENST00000380315 PBRM1Q86U86 1689 aa19.33■□□□□ 0.69
HBB-202ENST00000380315 MAGI1Q96QZ7 1491 aaPredicted RBP19.31■□□□□ 0.68
HBB-202ENST00000380315 CHD1O14646 1710 aa19.29■□□□□ 0.68
HBB-202ENST00000380315 OSCARQ8IYS5 282 aa19.28■□□□□ 0.68
HBB-202ENST00000380315 FBLN2P98095 1184 aa19.27■□□□□ 0.68
HBB-202ENST00000380315 SYNJ2O15056 1496 aa19.23■□□□□ 0.67
HBB-202ENST00000380315 ADAMTS12P58397 1594 aa19.23■□□□□ 0.67
HBB-202ENST00000380315 ERICH3Q5RHP9 1530 aa19.21■□□□□ 0.67
HBB-202ENST00000380315 CHMP7Q8WUX9 453 aaPredicted RBP19.2■□□□□ 0.66
HBB-202ENST00000380315 KIF27Q86VH2 1401 aa19.19■□□□□ 0.66
HBB-202ENST00000380315 TRIM41Q8WV44 630 aa19.16■□□□□ 0.66
HBB-202ENST00000380315 FHAD1B1AJZ9 1412 aa19.16■□□□□ 0.66
HBB-202ENST00000380315 GRIN2AQ12879 1464 aa19.15■□□□□ 0.66
HBB-202ENST00000380315 IGF1RP08069 1367 aa19.12■□□□□ 0.65
HBB-202ENST00000380315 CLASP1Q7Z460 1538 aa19.11■□□□□ 0.65
HBB-202ENST00000380315 RUSC2Q8N2Y8 1516 aa19.1■□□□□ 0.65
HBB-202ENST00000380315 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
HBB-202ENST00000380315 NUP160Q12769 1436 aa19.05■□□□□ 0.64
HBB-202ENST00000380315 CUL7Q14999 1698 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms