RNA–Protein interactions for RNA: ENST00000380027.5

TRIM5-201, Transcript of tripartite motif containing 5, humanhuman

TSL 5 BASIC

Gene TRIM5, Length 2,290 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM5-201ENST00000380027 NISCHQ9Y2I1 1504 aa18.51■□□□□ 0.55
TRIM5-201ENST00000380027 CCDC180Q9P1Z9 1646 aa16.05■□□□□ 0.16
TRIM5-201ENST00000380027 ZCCHC6Q5VYS8 1495 aaKnown RBP15.56■□□□□ 0.08
TRIM5-201ENST00000380027 DCAF8L2P0C7V8 631 aa15.4■□□□□ 0.06
TRIM5-201ENST00000380027 SHROOM4Q9ULL8 1493 aa15.35■□□□□ 0.05
TRIM5-201ENST00000380027 AEBP2Q6ZN18 517 aaPredicted RBP15.22■□□□□ 0.03
TRIM5-201ENST00000380027 DCAF1Q9Y4B6 1507 aa15.21■□□□□ 0.03
TRIM5-201ENST00000380027 ABCC9O60706 1549 aa15.2■□□□□ 0.02
TRIM5-201ENST00000380027 MYO15BQ96JP2 1530 aa14.96□□□□□ -0.02
TRIM5-201ENST00000380027 NACADO15069 1562 aa14.91□□□□□ -0.02
TRIM5-201ENST00000380027 SCRIBQ14160 1630 aa14.9□□□□□ -0.02
TRIM5-201ENST00000380027 SUPT5HO00267 1087 aaKnown RBP14.8□□□□□ -0.04
TRIM5-201ENST00000380027 RB1CC1Q8TDY2 1594 aa14.79□□□□□ -0.04
TRIM5-201ENST00000380027 UNC13AQ9UPW8 1703 aa14.6□□□□□ -0.07
TRIM5-201ENST00000380027 CECR2Q9BXF3 1484 aa14.45□□□□□ -0.1
TRIM5-201ENST00000380027 RSF1Q96T23 1441 aaPredicted RBP14.42□□□□□ -0.1
TRIM5-201ENST00000380027 PABPN1Q86U42 306 aaKnown RBP eCLIP14.39□□□□□ -0.11
TRIM5-201ENST00000380027 BICRAQ9NZM4 1560 aa14.39□□□□□ -0.11
TRIM5-201ENST00000380027 MROH2BQ7Z745 1585 aa14.36□□□□□ -0.11
TRIM5-201ENST00000380027 WIZO95785 1651 aa14.28□□□□□ -0.12
TRIM5-201ENST00000380027 BAZ1AQ9NRL2 1556 aaPredicted RBP14.26□□□□□ -0.13
TRIM5-201ENST00000380027 SMARCA4P51532 1647 aa14.23□□□□□ -0.13
TRIM5-201ENST00000380027 CHIC1Q5VXU3 224 aa14.21□□□□□ -0.13
TRIM5-201ENST00000380027 TOP2AP11388 1531 aaKnown RBP14.05□□□□□ -0.16
TRIM5-201ENST00000380027 PEG3Q9GZU2 1588 aa13.97□□□□□ -0.17
TRIM5-201ENST00000380027 SMARCA2P51531 1590 aa13.96□□□□□ -0.17
TRIM5-201ENST00000380027 CCDC88BA6NC98 1476 aa13.95□□□□□ -0.18
TRIM5-201ENST00000380027 ATAD2BQ9ULI0 1458 aa13.95□□□□□ -0.18
TRIM5-201ENST00000380027 EIF4G1Q04637 1599 aaKnown RBP13.93□□□□□ -0.18
TRIM5-201ENST00000380027 BAZ1BQ9UIG0 1483 aaKnown RBP13.88□□□□□ -0.19
TRIM5-201ENST00000380027 TRIM41Q8WV44 630 aa13.83□□□□□ -0.2
TRIM5-201ENST00000380027 NCAPD3P42695 1498 aa13.76□□□□□ -0.21
TRIM5-201ENST00000380027 ABCC8Q09428 1581 aa13.76□□□□□ -0.21
TRIM5-201ENST00000380027 HMGXB3Q12766 1538 aa13.75□□□□□ -0.21
TRIM5-201ENST00000380027 HRCP23327 699 aa13.74□□□□□ -0.21
TRIM5-201ENST00000380027 CC2D2AQ9P2K1 1620 aa13.73□□□□□ -0.21
TRIM5-201ENST00000380027 LOC105371045A0A1W2PR82 267 aa13.7□□□□□ -0.22
TRIM5-201ENST00000380027 PELP1Q8IZL8 1130 aaKnown RBP13.7□□□□□ -0.22
TRIM5-201ENST00000380027 FAM9AQ8IZU1 332 aaPredicted RBP13.69□□□□□ -0.22
TRIM5-201ENST00000380027 EHMT2Q96KQ7 1210 aa13.57□□□□□ -0.24
TRIM5-201ENST00000380027 WRNQ14191 1432 aaPredicted RBP eCLIP13.56□□□□□ -0.24
TRIM5-201ENST00000380027 SYNJ1O43426 1573 aa13.56□□□□□ -0.24
TRIM5-201ENST00000380027 MYT1Q01538 1121 aa13.51□□□□□ -0.25
TRIM5-201ENST00000380027 CFTRP13569 1480 aa13.51□□□□□ -0.25
TRIM5-201ENST00000380027 SOGA1O94964 1423 aa13.49□□□□□ -0.25
TRIM5-201ENST00000380027 PRDM2Q13029 1718 aa13.49□□□□□ -0.25
TRIM5-201ENST00000380027 RUSC2Q8N2Y8 1516 aa13.47□□□□□ -0.25
TRIM5-201ENST00000380027 CADPSQ9ULU8 1353 aa13.44□□□□□ -0.26
TRIM5-201ENST00000380027 TOP2BQ02880 1626 aa13.43□□□□□ -0.26
TRIM5-201ENST00000380027 DNAJC5BQ9UF47 199 aa13.43□□□□□ -0.26
TRIM5-201ENST00000380027 BIVM-ERCC5R4GMW8 1640 aa13.43□□□□□ -0.26
TRIM5-201ENST00000380027 CUX1P39880 1505 aa13.41□□□□□ -0.26
TRIM5-201ENST00000380027 NESP48681 1621 aa13.39□□□□□ -0.27
TRIM5-201ENST00000380027 CSRNP3Q8WYN3 585 aa13.36□□□□□ -0.27
TRIM5-201ENST00000380027 EEA1Q15075 1411 aa13.35□□□□□ -0.27
TRIM5-201ENST00000380027 FANCD2Q9BXW9 1451 aa13.33□□□□□ -0.28
TRIM5-201ENST00000380027 PPARGC1BQ86YN6 1023 aaKnown RBP13.33□□□□□ -0.28
TRIM5-201ENST00000380027 LAMC3Q9Y6N6 1575 aa13.29□□□□□ -0.28
TRIM5-201ENST00000380027 PCGF6Q9BYE7 350 aa13.25□□□□□ -0.29
TRIM5-201ENST00000380027 GOLGA3Q08378 1498 aa13.24□□□□□ -0.29
TRIM5-201ENST00000380027 UBTFP17480 764 aaKnown RBP13.24□□□□□ -0.29
TRIM5-201ENST00000380027 KIF21BO75037 1637 aa13.24□□□□□ -0.29
TRIM5-201ENST00000380027 FGD5Q6ZNL6 1462 aa13.24□□□□□ -0.29
TRIM5-201ENST00000380027 KIF21AQ7Z4S6 1674 aa13.23□□□□□ -0.29
TRIM5-201ENST00000380027 CEP164Q9UPV0 1460 aa13.22□□□□□ -0.29
TRIM5-201ENST00000380027 DNMBPQ6XZF7 1577 aa13.22□□□□□ -0.29
TRIM5-201ENST00000380027 TNIKQ9UKE5 1360 aa13.21□□□□□ -0.29
TRIM5-201ENST00000380027 TOPBP1Q92547 1522 aa13.2□□□□□ -0.3
TRIM5-201ENST00000380027 RAPGEF2Q9Y4G8 1499 aa13.2□□□□□ -0.3
TRIM5-201ENST00000380027 CEP162Q5TB80 1403 aa13.19□□□□□ -0.3
TRIM5-201ENST00000380027 KIF27Q86VH2 1401 aa13.19□□□□□ -0.3
TRIM5-201ENST00000380027 CUX2O14529 1486 aa13.18□□□□□ -0.3
TRIM5-201ENST00000380027 PDS5BQ9NTI5 1447 aa13.18□□□□□ -0.3
TRIM5-201ENST00000380027 URB2Q14146 1524 aaKnown RBP13.18□□□□□ -0.3
TRIM5-201ENST00000380027 RAD54L2Q9Y4B4 1467 aa13.16□□□□□ -0.3
TRIM5-201ENST00000380027 TTBK1Q5TCY1 1321 aaPredicted RBP13.15□□□□□ -0.3
TRIM5-201ENST00000380027 POLA1P09884 1462 aaPredicted RBP13.15□□□□□ -0.3
TRIM5-201ENST00000380027 SLC24A1O60721 1099 aa13.13□□□□□ -0.31
TRIM5-201ENST00000380027 PRXQ9BXM0 1461 aa13.13□□□□□ -0.31
TRIM5-201ENST00000380027 RANGAP1P46060 587 aaPredicted RBP13.11□□□□□ -0.31
TRIM5-201ENST00000380027 ERICH3Q5RHP9 1530 aa13.1□□□□□ -0.31
TRIM5-201ENST00000380027 SCAF1Q9H7N4 1312 aaKnown RBP13.09□□□□□ -0.31
TRIM5-201ENST00000380027 IGF1RP08069 1367 aa13.08□□□□□ -0.32
TRIM5-201ENST00000380027 ABCA10Q8WWZ4 1543 aa13.08□□□□□ -0.32
TRIM5-201ENST00000380027 WDR97A6NE52 1622 aa13.07□□□□□ -0.32
TRIM5-201ENST00000380027 SENP3Q9H4L4 574 aaPredicted RBP13.06□□□□□ -0.32
TRIM5-201ENST00000380027 TRIM26Q12899 539 aaPredicted RBP13.06□□□□□ -0.32
TRIM5-201ENST00000380027 CLIP1P30622 1438 aa13.06□□□□□ -0.32
TRIM5-201ENST00000380027 MRC2Q9UBG0 1479 aa13.03□□□□□ -0.32
TRIM5-201ENST00000380027 CARMIL1Q5VZK9 1371 aa13.02□□□□□ -0.32
TRIM5-201ENST00000380027 TDRD9Q8NDG6 1382 aaKnown RBP13.01□□□□□ -0.33
TRIM5-201ENST00000380027 TARBP1Q13395 1621 aaKnown RBP12.99□□□□□ -0.33
TRIM5-201ENST00000380027 ABCA5Q8WWZ7 1642 aa12.99□□□□□ -0.33
TRIM5-201ENST00000380027 ERCC6Q03468 1493 aa12.98□□□□□ -0.33
TRIM5-201ENST00000380027 CUL7Q14999 1698 aa12.96□□□□□ -0.34
TRIM5-201ENST00000380027 GAPVD1Q14C86 1478 aa12.95□□□□□ -0.34
TRIM5-201ENST00000380027 WDR62O43379 1518 aa12.95□□□□□ -0.34
TRIM5-201ENST00000380027 VPS8Q8N3P4 1428 aa12.94□□□□□ -0.34
TRIM5-201ENST00000380027 ARAP1Q96P48 1450 aa12.93□□□□□ -0.34
TRIM5-201ENST00000380027 PBRM1Q86U86 1689 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms