RNA–Protein interactions for RNA: ENST00000379521.8

NFX1-202, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best)

Gene NFX1, Length 3,609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-202ENST00000379521 NISCHQ9Y2I1 1504 aa15.83■□□□□ 0.12
NFX1-202ENST00000379521 CCDC180Q9P1Z9 1646 aa13.98□□□□□ -0.17
NFX1-202ENST00000379521 ZCCHC6Q5VYS8 1495 aaKnown RBP13.46□□□□□ -0.25
NFX1-202ENST00000379521 DCAF1Q9Y4B6 1507 aa13.43□□□□□ -0.26
NFX1-202ENST00000379521 MYO15BQ96JP2 1530 aa13.2□□□□□ -0.3
NFX1-202ENST00000379521 NACADO15069 1562 aa12.71□□□□□ -0.37
NFX1-202ENST00000379521 ABCC9O60706 1549 aa12.7□□□□□ -0.38
NFX1-202ENST00000379521 UNC13AQ9UPW8 1703 aa12.55□□□□□ -0.4
NFX1-202ENST00000379521 RB1CC1Q8TDY2 1594 aa12.4□□□□□ -0.42
NFX1-202ENST00000379521 EIF4G1Q04637 1599 aaKnown RBP12.37□□□□□ -0.43
NFX1-202ENST00000379521 SCRIBQ14160 1630 aa12.36□□□□□ -0.43
NFX1-202ENST00000379521 PEG3Q9GZU2 1588 aa12.28□□□□□ -0.44
NFX1-202ENST00000379521 RSF1Q96T23 1441 aaPredicted RBP12.27□□□□□ -0.44
NFX1-202ENST00000379521 BICRAQ9NZM4 1560 aa12.27□□□□□ -0.44
NFX1-202ENST00000379521 SHROOM4Q9ULL8 1493 aa12.27□□□□□ -0.45
NFX1-202ENST00000379521 BAZ1AQ9NRL2 1556 aaPredicted RBP12.25□□□□□ -0.45
NFX1-202ENST00000379521 MROH2BQ7Z745 1585 aa12.15□□□□□ -0.46
NFX1-202ENST00000379521 SMARCA4P51532 1647 aa12.15□□□□□ -0.46
NFX1-202ENST00000379521 WIZO95785 1651 aa12.1□□□□□ -0.47
NFX1-202ENST00000379521 CECR2Q9BXF3 1484 aa12.09□□□□□ -0.47
NFX1-202ENST00000379521 TOP2AP11388 1531 aaKnown RBP12.07□□□□□ -0.48
NFX1-202ENST00000379521 SMARCA2P51531 1590 aa11.98□□□□□ -0.49
NFX1-202ENST00000379521 CHIC1Q5VXU3 224 aa11.96□□□□□ -0.49
NFX1-202ENST00000379521 PRDM2Q13029 1718 aa11.85□□□□□ -0.51
NFX1-202ENST00000379521 SUPT5HO00267 1087 aaKnown RBP11.83□□□□□ -0.52
NFX1-202ENST00000379521 HMGXB3Q12766 1538 aa11.81□□□□□ -0.52
NFX1-202ENST00000379521 CCDC88BA6NC98 1476 aa11.78□□□□□ -0.52
NFX1-202ENST00000379521 ATAD2BQ9ULI0 1458 aa11.73□□□□□ -0.53
NFX1-202ENST00000379521 BIVM-ERCC5R4GMW8 1640 aa11.72□□□□□ -0.53
NFX1-202ENST00000379521 DCAF8L2P0C7V8 631 aa11.71□□□□□ -0.54
NFX1-202ENST00000379521 NCAPD3P42695 1498 aa11.67□□□□□ -0.54
NFX1-202ENST00000379521 TOP2BQ02880 1626 aa11.6□□□□□ -0.55
NFX1-202ENST00000379521 KIF21BO75037 1637 aa11.58□□□□□ -0.56
NFX1-202ENST00000379521 SYNJ1O43426 1573 aa11.57□□□□□ -0.56
NFX1-202ENST00000379521 ABCC8Q09428 1581 aa11.53□□□□□ -0.56
NFX1-202ENST00000379521 EEA1Q15075 1411 aa11.52□□□□□ -0.56
NFX1-202ENST00000379521 BAZ1BQ9UIG0 1483 aaKnown RBP11.5□□□□□ -0.57
NFX1-202ENST00000379521 WRNQ14191 1432 aaPredicted RBP eCLIP11.5□□□□□ -0.57
NFX1-202ENST00000379521 CFTRP13569 1480 aa11.48□□□□□ -0.57
NFX1-202ENST00000379521 WDR97A6NE52 1622 aa11.42□□□□□ -0.58
NFX1-202ENST00000379521 ERICH3Q5RHP9 1530 aa11.41□□□□□ -0.58
NFX1-202ENST00000379521 CUX1P39880 1505 aa11.38□□□□□ -0.59
NFX1-202ENST00000379521 CC2D2AQ9P2K1 1620 aa11.36□□□□□ -0.59
NFX1-202ENST00000379521 TNIKQ9UKE5 1360 aa11.33□□□□□ -0.6
NFX1-202ENST00000379521 PRXQ9BXM0 1461 aa11.33□□□□□ -0.6
NFX1-202ENST00000379521 RUSC2Q8N2Y8 1516 aa11.32□□□□□ -0.6
NFX1-202ENST00000379521 SOGA1O94964 1423 aa11.31□□□□□ -0.6
NFX1-202ENST00000379521 TRIM41Q8WV44 630 aa11.27□□□□□ -0.61
NFX1-202ENST00000379521 GOLGA3Q08378 1498 aa11.25□□□□□ -0.61
NFX1-202ENST00000379521 CEP164Q9UPV0 1460 aa11.25□□□□□ -0.61
NFX1-202ENST00000379521 LOC105371045A0A1W2PR82 267 aa11.25□□□□□ -0.61
NFX1-202ENST00000379521 LAMC3Q9Y6N6 1575 aa11.25□□□□□ -0.61
NFX1-202ENST00000379521 PABPN1Q86U42 306 aaKnown RBP eCLIP11.24□□□□□ -0.61
NFX1-202ENST00000379521 DNMBPQ6XZF7 1577 aa11.21□□□□□ -0.61
NFX1-202ENST00000379521 ABCA5Q8WWZ7 1642 aa11.19□□□□□ -0.62
NFX1-202ENST00000379521 CEP162Q5TB80 1403 aa11.18□□□□□ -0.62
NFX1-202ENST00000379521 HRCP23327 699 aa11.17□□□□□ -0.62
NFX1-202ENST00000379521 MAP3K1Q13233 1512 aa11.17□□□□□ -0.62
NFX1-202ENST00000379521 CADPSQ9ULU8 1353 aa11.16□□□□□ -0.62
NFX1-202ENST00000379521 CUL7Q14999 1698 aa11.15□□□□□ -0.62
NFX1-202ENST00000379521 ABCA10Q8WWZ4 1543 aa11.14□□□□□ -0.63
NFX1-202ENST00000379521 TARBP1Q13395 1621 aaKnown RBP11.13□□□□□ -0.63
NFX1-202ENST00000379521 RAPGEF2Q9Y4G8 1499 aa11.12□□□□□ -0.63
NFX1-202ENST00000379521 CTTNBP2Q8WZ74 1663 aa11.12□□□□□ -0.63
NFX1-202ENST00000379521 TRIM26Q12899 539 aaPredicted RBP11.11□□□□□ -0.63
NFX1-202ENST00000379521 ARAP1Q96P48 1450 aa11.11□□□□□ -0.63
NFX1-202ENST00000379521 CFAP43Q8NDM7 1665 aa11.1□□□□□ -0.63
NFX1-202ENST00000379521 KIF21AQ7Z4S6 1674 aa11.09□□□□□ -0.63
NFX1-202ENST00000379521 CSRNP3Q8WYN3 585 aa11.08□□□□□ -0.64
NFX1-202ENST00000379521 SAMD9Q5K651 1589 aa11.07□□□□□ -0.64
NFX1-202ENST00000379521 CUX2O14529 1486 aa11.06□□□□□ -0.64
NFX1-202ENST00000379521 TOPBP1Q92547 1522 aa11.06□□□□□ -0.64
NFX1-202ENST00000379521 VPS8Q8N3P4 1428 aa11.06□□□□□ -0.64
NFX1-202ENST00000379521 LRRIQ1Q96JM4 1722 aa11.04□□□□□ -0.64
NFX1-202ENST00000379521 FGD5Q6ZNL6 1462 aa11.04□□□□□ -0.64
NFX1-202ENST00000379521 FANCD2Q9BXW9 1451 aa11.03□□□□□ -0.64
NFX1-202ENST00000379521 URB2Q14146 1524 aaKnown RBP11.03□□□□□ -0.64
NFX1-202ENST00000379521 CLIP1P30622 1438 aa11.02□□□□□ -0.65
NFX1-202ENST00000379521 PBRM1Q86U86 1689 aa11.02□□□□□ -0.65
NFX1-202ENST00000379521 KIF27Q86VH2 1401 aa11.01□□□□□ -0.65
NFX1-202ENST00000379521 POLA1P09884 1462 aaPredicted RBP11□□□□□ -0.65
NFX1-202ENST00000379521 IGF1RP08069 1367 aa11□□□□□ -0.65
NFX1-202ENST00000379521 AQRO60306 1485 aaKnown RBP eCLIP11□□□□□ -0.652e-8■■■■■ 31.5
NFX1-202ENST00000379521 EFCAB5A4FU69 1503 aa10.99□□□□□ -0.65
NFX1-202ENST00000379521 ARHGAP35Q9NRY4 1499 aa10.99□□□□□ -0.65
NFX1-202ENST00000379521 WDR62O43379 1518 aa10.98□□□□□ -0.65
NFX1-202ENST00000379521 THOC2Q8NI27 1593 aaKnown RBP10.96□□□□□ -0.65
NFX1-202ENST00000379521 RRBP1Q9P2E9 1410 aaKnown RBP10.94□□□□□ -0.66
NFX1-202ENST00000379521 TIAM1Q13009 1591 aa10.93□□□□□ -0.66
NFX1-202ENST00000379521 ARHGEF11O15085 1522 aa10.91□□□□□ -0.66
NFX1-202ENST00000379521 NESP48681 1621 aa10.91□□□□□ -0.66
NFX1-202ENST00000379521 ADAMTS12P58397 1594 aa10.91□□□□□ -0.66
NFX1-202ENST00000379521 SNAPC4Q5SXM2 1469 aa10.89□□□□□ -0.67
NFX1-202ENST00000379521 PCGF6Q9BYE7 350 aa10.89□□□□□ -0.67
NFX1-202ENST00000379521 PCF11O94913 1555 aaKnown RBP10.85□□□□□ -0.67
NFX1-202ENST00000379521 FYCO1Q9BQS8 1478 aa10.84□□□□□ -0.67
NFX1-202ENST00000379521 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.83□□□□□ -0.68
NFX1-202ENST00000379521 PDS5BQ9NTI5 1447 aa10.82□□□□□ -0.68
NFX1-202ENST00000379521 UGGT2Q9NYU1 1516 aa10.81□□□□□ -0.68
NFX1-202ENST00000379521 GRIN2BQ13224 1484 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms