RNA–Protein interactions for RNA: ENST00000379384.9

TM6SF1-203, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 5

Gene TM6SF1, Length 1,808 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-203ENST00000379384 NISCHQ9Y2I1 1504 aa43.33■■■■■ 4.53
TM6SF1-203ENST00000379384 CCDC180Q9P1Z9 1646 aa38.45■■■■□ 3.75
TM6SF1-203ENST00000379384 ABCC9O60706 1549 aa37.39■■■■□ 3.58
TM6SF1-203ENST00000379384 DCAF8L2P0C7V8 631 aa36.15■■■■□ 3.38
TM6SF1-203ENST00000379384 ZCCHC6Q5VYS8 1495 aaKnown RBP36.14■■■■□ 3.38
TM6SF1-203ENST00000379384 RB1CC1Q8TDY2 1594 aa36.06■■■■□ 3.36
TM6SF1-203ENST00000379384 NACADO15069 1562 aa36.05■■■■□ 3.36
TM6SF1-203ENST00000379384 MYO15BQ96JP2 1530 aa35.87■■■■□ 3.33
TM6SF1-203ENST00000379384 DCAF1Q9Y4B6 1507 aa35.82■■■■□ 3.33
TM6SF1-203ENST00000379384 UNC13AQ9UPW8 1703 aa35.38■■■■□ 3.25
TM6SF1-203ENST00000379384 SCRIBQ14160 1630 aa35.14■■■■□ 3.22
TM6SF1-203ENST00000379384 BICRAQ9NZM4 1560 aa34.97■■■■□ 3.19
TM6SF1-203ENST00000379384 PABPN1Q86U42 306 aaKnown RBP eCLIP34.97■■■■□ 3.19
TM6SF1-203ENST00000379384 SHROOM4Q9ULL8 1493 aa34.54■■■■□ 3.12
TM6SF1-203ENST00000379384 DNAJC5BQ9UF47 199 aa34.07■■■■□ 3.04
TM6SF1-203ENST00000379384 EIF4G1Q04637 1599 aaKnown RBP34.04■■■■□ 3.04
TM6SF1-203ENST00000379384 CC2D2AQ9P2K1 1620 aa33.86■■■■□ 3.01
TM6SF1-203ENST00000379384 CECR2Q9BXF3 1484 aa33.75■■■□□ 2.99
TM6SF1-203ENST00000379384 SMARCA4P51532 1647 aa33.61■■■□□ 2.97
TM6SF1-203ENST00000379384 BAZ1AQ9NRL2 1556 aaPredicted RBP33.58■■■□□ 2.97
TM6SF1-203ENST00000379384 MROH2BQ7Z745 1585 aa33.42■■■□□ 2.94
TM6SF1-203ENST00000379384 ATAD2BQ9ULI0 1458 aa33.32■■■□□ 2.92
TM6SF1-203ENST00000379384 SMARCA2P51531 1590 aa33.31■■■□□ 2.92
TM6SF1-203ENST00000379384 PEG3Q9GZU2 1588 aa33.24■■■□□ 2.91
TM6SF1-203ENST00000379384 NCAPD3P42695 1498 aa33.23■■■□□ 2.91
TM6SF1-203ENST00000379384 WIZO95785 1651 aa33.13■■■□□ 2.89
TM6SF1-203ENST00000379384 HMGXB3Q12766 1538 aa33.13■■■□□ 2.89
TM6SF1-203ENST00000379384 RSF1Q96T23 1441 aaPredicted RBP33.09■■■□□ 2.89
TM6SF1-203ENST00000379384 BAZ1BQ9UIG0 1483 aaKnown RBP33.08■■■□□ 2.89
TM6SF1-203ENST00000379384 TOP2AP11388 1531 aaKnown RBP32.72■■■□□ 2.83
TM6SF1-203ENST00000379384 SUPT5HO00267 1087 aaKnown RBP32.49■■■□□ 2.79
TM6SF1-203ENST00000379384 NESP48681 1621 aa32.44■■■□□ 2.78
TM6SF1-203ENST00000379384 LAMC3Q9Y6N6 1575 aa32.37■■■□□ 2.77
TM6SF1-203ENST00000379384 CCDC88BA6NC98 1476 aa32.34■■■□□ 2.77
TM6SF1-203ENST00000379384 CADPSQ9ULU8 1353 aa32.29■■■□□ 2.76
TM6SF1-203ENST00000379384 ERCC6Q03468 1493 aa32.21■■■□□ 2.75
TM6SF1-203ENST00000379384 CFTRP13569 1480 aa32.16■■■□□ 2.74
TM6SF1-203ENST00000379384 KIF21AQ7Z4S6 1674 aa32.13■■■□□ 2.73
TM6SF1-203ENST00000379384 PDS5BQ9NTI5 1447 aa32.12■■■□□ 2.73
TM6SF1-203ENST00000379384 PRDM2Q13029 1718 aa32.07■■■□□ 2.72
TM6SF1-203ENST00000379384 FANCD2Q9BXW9 1451 aa31.95■■■□□ 2.71
TM6SF1-203ENST00000379384 THOC2Q8NI27 1593 aaKnown RBP31.9■■■□□ 2.7
TM6SF1-203ENST00000379384 CEP164Q9UPV0 1460 aa31.9■■■□□ 2.7
TM6SF1-203ENST00000379384 MRC2Q9UBG0 1479 aa31.78■■■□□ 2.68
TM6SF1-203ENST00000379384 CUX2O14529 1486 aa31.74■■■□□ 2.67
TM6SF1-203ENST00000379384 WDR62O43379 1518 aa31.69■■■□□ 2.66
TM6SF1-203ENST00000379384 URB2Q14146 1524 aaKnown RBP31.62■■■□□ 2.65
TM6SF1-203ENST00000379384 TOPBP1Q92547 1522 aa31.47■■■□□ 2.63
TM6SF1-203ENST00000379384 DNMBPQ6XZF7 1577 aa31.47■■■□□ 2.63
TM6SF1-203ENST00000379384 ABCC8Q09428 1581 aa31.45■■■□□ 2.63
TM6SF1-203ENST00000379384 CUX1P39880 1505 aa31.34■■■□□ 2.61
TM6SF1-203ENST00000379384 POLA1P09884 1462 aaPredicted RBP31.23■■■□□ 2.59
TM6SF1-203ENST00000379384 WRNQ14191 1432 aaPredicted RBP eCLIP31.2■■■□□ 2.59
TM6SF1-203ENST00000379384 FGD5Q6ZNL6 1462 aa31.19■■■□□ 2.58
TM6SF1-203ENST00000379384 IFT140Q96RY7 1462 aa31.19■■■□□ 2.58
TM6SF1-203ENST00000379384 SYNJ1O43426 1573 aa31.16■■■□□ 2.58
TM6SF1-203ENST00000379384 BIVM-ERCC5R4GMW8 1640 aa31.15■■■□□ 2.58
TM6SF1-203ENST00000379384 TOP2BQ02880 1626 aa31.14■■■□□ 2.58
TM6SF1-203ENST00000379384 TARBP1Q13395 1621 aaKnown RBP31.14■■■□□ 2.57
TM6SF1-203ENST00000379384 RAD54L2Q9Y4B4 1467 aa31.09■■■□□ 2.57
TM6SF1-203ENST00000379384 SOGA1O94964 1423 aa31.09■■■□□ 2.57
TM6SF1-203ENST00000379384 ZNF608Q9ULD9 1512 aaPredicted RBP31.07■■■□□ 2.56
TM6SF1-203ENST00000379384 EIF4G3O43432 1585 aaKnown RBP30.99■■■□□ 2.55
TM6SF1-203ENST00000379384 WDR97A6NE52 1622 aa30.97■■■□□ 2.55
TM6SF1-203ENST00000379384 AQRO60306 1485 aaKnown RBP eCLIP30.92■■■□□ 2.54
TM6SF1-203ENST00000379384 TDRD9Q8NDG6 1382 aaKnown RBP30.89■■■□□ 2.54
TM6SF1-203ENST00000379384 ABCA10Q8WWZ4 1543 aa30.88■■■□□ 2.53
TM6SF1-203ENST00000379384 ABCA5Q8WWZ7 1642 aa30.78■■■□□ 2.52
TM6SF1-203ENST00000379384 PBRM1Q86U86 1689 aa30.75■■■□□ 2.51
TM6SF1-203ENST00000379384 GAPVD1Q14C86 1478 aa30.74■■■□□ 2.51
TM6SF1-203ENST00000379384 GRIN2BQ13224 1484 aa30.68■■■□□ 2.5
TM6SF1-203ENST00000379384 TRIM41Q8WV44 630 aa30.65■■■□□ 2.5
TM6SF1-203ENST00000379384 SNAPC4Q5SXM2 1469 aa30.64■■■□□ 2.5
TM6SF1-203ENST00000379384 CHD1O14646 1710 aa30.61■■■□□ 2.49
TM6SF1-203ENST00000379384 MAGI1Q96QZ7 1491 aaPredicted RBP30.59■■■□□ 2.49
TM6SF1-203ENST00000379384 KIF27Q86VH2 1401 aa30.53■■■□□ 2.48
TM6SF1-203ENST00000379384 FBLN2P98095 1184 aa30.52■■■□□ 2.48
TM6SF1-203ENST00000379384 ERICH3Q5RHP9 1530 aa30.52■■■□□ 2.48
TM6SF1-203ENST00000379384 OSCARQ8IYS5 282 aa30.47■■■□□ 2.47
TM6SF1-203ENST00000379384 DNAJC5Q9H3Z4 198 aa30.47■■■□□ 2.47
TM6SF1-203ENST00000379384 SYNJ2O15056 1496 aa30.47■■■□□ 2.47
TM6SF1-203ENST00000379384 ADAMTS12P58397 1594 aa30.46■■■□□ 2.47
TM6SF1-203ENST00000379384 CHMP7Q8WUX9 453 aaPredicted RBP30.44■■■□□ 2.46
TM6SF1-203ENST00000379384 CHIC1Q5VXU3 224 aa30.4■■■□□ 2.46
TM6SF1-203ENST00000379384 RUSC2Q8N2Y8 1516 aa30.37■■■□□ 2.45
TM6SF1-203ENST00000379384 FHAD1B1AJZ9 1412 aa30.37■■■□□ 2.45
TM6SF1-203ENST00000379384 IGF1RP08069 1367 aa30.35■■■□□ 2.45
TM6SF1-203ENST00000379384 CUL7Q14999 1698 aa30.33■■■□□ 2.45
TM6SF1-203ENST00000379384 GRIN2AQ12879 1464 aa30.32■■■□□ 2.44
TM6SF1-203ENST00000379384 CARMIL1Q5VZK9 1371 aa30.19■■■□□ 2.42
TM6SF1-203ENST00000379384 CEP170Q5SW79 1584 aa30.18■■■□□ 2.42
TM6SF1-203ENST00000379384 CLASP1Q7Z460 1538 aa30.18■■■□□ 2.42
TM6SF1-203ENST00000379384 NUP160Q12769 1436 aa30.14■■■□□ 2.41
TM6SF1-203ENST00000379384 EEA1Q15075 1411 aa30.07■■■□□ 2.4
TM6SF1-203ENST00000379384 RAPGEF2Q9Y4G8 1499 aa30.05■■■□□ 2.4
TM6SF1-203ENST00000379384 FAM9AQ8IZU1 332 aaPredicted RBP30.04■■■□□ 2.4
TM6SF1-203ENST00000379384 RIMBP3CA6NJZ7 1639 aa30.03■■■□□ 2.4
TM6SF1-203ENST00000379384 RIMBP3BA6NNM3 1639 aa30.03■■■□□ 2.4
TM6SF1-203ENST00000379384 RIMBP3Q9UFD9 1639 aa30.03■■■□□ 2.4
TM6SF1-203ENST00000379384 ARHGEF11O15085 1522 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms