RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 NISCHQ9Y2I1 1504 aa32.4■■■□□ 2.78
RAB3IP-203ENST00000378809 CCDC180Q9P1Z9 1646 aa27.97■■■□□ 2.07
RAB3IP-203ENST00000378809 ZCCHC6Q5VYS8 1495 aaKnown RBP27.28■■□□□ 1.96
RAB3IP-203ENST00000378809 DCAF8L2P0C7V8 631 aa26.99■■□□□ 1.91
RAB3IP-203ENST00000378809 SHROOM4Q9ULL8 1493 aa26.98■■□□□ 1.91
RAB3IP-203ENST00000378809 DCAF1Q9Y4B6 1507 aa26.67■■□□□ 1.86
RAB3IP-203ENST00000378809 ABCC9O60706 1549 aa26.39■■□□□ 1.82
RAB3IP-203ENST00000378809 MYO15BQ96JP2 1530 aa26.19■■□□□ 1.78
RAB3IP-203ENST00000378809 SUPT5HO00267 1087 aaKnown RBP26.14■■□□□ 1.77
RAB3IP-203ENST00000378809 NACADO15069 1562 aa26.02■■□□□ 1.76
RAB3IP-203ENST00000378809 SCRIBQ14160 1630 aa25.99■■□□□ 1.75
RAB3IP-203ENST00000378809 RB1CC1Q8TDY2 1594 aa25.75■■□□□ 1.71
RAB3IP-203ENST00000378809 RSF1Q96T23 1441 aaPredicted RBP25.33■■□□□ 1.65
RAB3IP-203ENST00000378809 CECR2Q9BXF3 1484 aa25.24■■□□□ 1.63
RAB3IP-203ENST00000378809 UNC13AQ9UPW8 1703 aa25.2■■□□□ 1.63
RAB3IP-203ENST00000378809 MROH2BQ7Z745 1585 aa25.1■■□□□ 1.61
RAB3IP-203ENST00000378809 CHIC1Q5VXU3 224 aa25.07■■□□□ 1.6
RAB3IP-203ENST00000378809 PABPN1Q86U42 306 aaKnown RBP eCLIP25.05■■□□□ 1.6
RAB3IP-203ENST00000378809 BAZ1AQ9NRL2 1556 aaPredicted RBP24.99■■□□□ 1.59
RAB3IP-203ENST00000378809 BICRAQ9NZM4 1560 aa24.96■■□□□ 1.59
RAB3IP-203ENST00000378809 WIZO95785 1651 aa24.92■■□□□ 1.58
RAB3IP-203ENST00000378809 SMARCA4P51532 1647 aa24.83■■□□□ 1.57
RAB3IP-203ENST00000378809 TOP2AP11388 1531 aaKnown RBP24.61■■□□□ 1.53
RAB3IP-203ENST00000378809 TRIM41Q8WV44 630 aa24.47■■□□□ 1.51
RAB3IP-203ENST00000378809 CCDC88BA6NC98 1476 aa24.43■■□□□ 1.5
RAB3IP-203ENST00000378809 PEG3Q9GZU2 1588 aa24.42■■□□□ 1.5
RAB3IP-203ENST00000378809 SMARCA2P51531 1590 aa24.4■■□□□ 1.5
RAB3IP-203ENST00000378809 ATAD2BQ9ULI0 1458 aa24.36■■□□□ 1.49
RAB3IP-203ENST00000378809 BAZ1BQ9UIG0 1483 aaKnown RBP24.29■■□□□ 1.48
RAB3IP-203ENST00000378809 EIF4G1Q04637 1599 aaKnown RBP24.29■■□□□ 1.48
RAB3IP-203ENST00000378809 LOC105371045A0A1W2PR82 267 aa24.23■■□□□ 1.47
RAB3IP-203ENST00000378809 FAM9AQ8IZU1 332 aaPredicted RBP24.16■■□□□ 1.46
RAB3IP-203ENST00000378809 ABCC8Q09428 1581 aa24.09■■□□□ 1.45
RAB3IP-203ENST00000378809 NCAPD3P42695 1498 aa24.05■■□□□ 1.44
RAB3IP-203ENST00000378809 HMGXB3Q12766 1538 aa24.01■■□□□ 1.43
RAB3IP-203ENST00000378809 EHMT2Q96KQ7 1210 aa23.92■■□□□ 1.42
RAB3IP-203ENST00000378809 WRNQ14191 1432 aaPredicted RBP eCLIP23.86■■□□□ 1.41
RAB3IP-203ENST00000378809 CC2D2AQ9P2K1 1620 aa23.79■■□□□ 1.4
RAB3IP-203ENST00000378809 SOGA1O94964 1423 aa23.72■■□□□ 1.39
RAB3IP-203ENST00000378809 SYNJ1O43426 1573 aa23.72■■□□□ 1.39
RAB3IP-203ENST00000378809 CFTRP13569 1480 aa23.64■■□□□ 1.37
RAB3IP-203ENST00000378809 EEA1Q15075 1411 aa23.62■■□□□ 1.37
RAB3IP-203ENST00000378809 RUSC2Q8N2Y8 1516 aa23.6■■□□□ 1.37
RAB3IP-203ENST00000378809 CSRNP3Q8WYN3 585 aa23.58■■□□□ 1.37
RAB3IP-203ENST00000378809 PCGF6Q9BYE7 350 aa23.54■■□□□ 1.36
RAB3IP-203ENST00000378809 TOP2BQ02880 1626 aa23.54■■□□□ 1.36
RAB3IP-203ENST00000378809 CADPSQ9ULU8 1353 aa23.52■■□□□ 1.36
RAB3IP-203ENST00000378809 BIVM-ERCC5R4GMW8 1640 aa23.47■■□□□ 1.35
RAB3IP-203ENST00000378809 CUX1P39880 1505 aa23.44■■□□□ 1.34
RAB3IP-203ENST00000378809 UBTFP17480 764 aaKnown RBP23.42■■□□□ 1.34
RAB3IP-203ENST00000378809 PRDM2Q13029 1718 aa23.41■■□□□ 1.34
RAB3IP-203ENST00000378809 GOLGA3Q08378 1498 aa23.39■■□□□ 1.33
RAB3IP-203ENST00000378809 TNIKQ9UKE5 1360 aa23.36■■□□□ 1.33
RAB3IP-203ENST00000378809 CEP164Q9UPV0 1460 aa23.34■■□□□ 1.33
RAB3IP-203ENST00000378809 TRIM26Q12899 539 aaPredicted RBP23.33■■□□□ 1.33
RAB3IP-203ENST00000378809 CEP162Q5TB80 1403 aa23.32■■□□□ 1.32
RAB3IP-203ENST00000378809 FANCD2Q9BXW9 1451 aa23.28■■□□□ 1.32
RAB3IP-203ENST00000378809 KIF21BO75037 1637 aa23.28■■□□□ 1.32
RAB3IP-203ENST00000378809 NESP48681 1621 aa23.27■■□□□ 1.32
RAB3IP-203ENST00000378809 DNAJC5BQ9UF47 199 aa23.23■■□□□ 1.31
RAB3IP-203ENST00000378809 KIF27Q86VH2 1401 aa23.22■■□□□ 1.31
RAB3IP-203ENST00000378809 RAPGEF2Q9Y4G8 1499 aa23.21■■□□□ 1.31
RAB3IP-203ENST00000378809 PPARGC1BQ86YN6 1023 aaKnown RBP23.17■■□□□ 1.3
RAB3IP-203ENST00000378809 LAMC3Q9Y6N6 1575 aa23.16■■□□□ 1.3
RAB3IP-203ENST00000378809 FGD5Q6ZNL6 1462 aa23.15■■□□□ 1.3
RAB3IP-203ENST00000378809 CUX2O14529 1486 aa23.11■■□□□ 1.29
RAB3IP-203ENST00000378809 PRXQ9BXM0 1461 aa23.09■■□□□ 1.29
RAB3IP-203ENST00000378809 DNMBPQ6XZF7 1577 aa23.07■■□□□ 1.28
RAB3IP-203ENST00000378809 RANGAP1P46060 587 aaPredicted RBP23.07■■□□□ 1.28
RAB3IP-203ENST00000378809 CLIP1P30622 1438 aa23.06■■□□□ 1.28
RAB3IP-203ENST00000378809 ERICH3Q5RHP9 1530 aa23.06■■□□□ 1.28
RAB3IP-203ENST00000378809 HRCP23327 699 aa23.05■■□□□ 1.28
RAB3IP-203ENST00000378809 PDS5BQ9NTI5 1447 aa23.05■■□□□ 1.28
RAB3IP-203ENST00000378809 TOPBP1Q92547 1522 aa23.04■■□□□ 1.28
RAB3IP-203ENST00000378809 POLA1P09884 1462 aaPredicted RBP22.98■■□□□ 1.27
RAB3IP-203ENST00000378809 TTBK1Q5TCY1 1321 aaPredicted RBP22.97■■□□□ 1.27
RAB3IP-203ENST00000378809 IGF1RP08069 1367 aa22.96■■□□□ 1.27
RAB3IP-203ENST00000378809 RAD54L2Q9Y4B4 1467 aa22.96■■□□□ 1.27
RAB3IP-203ENST00000378809 URB2Q14146 1524 aaKnown RBP22.95■■□□□ 1.26
RAB3IP-203ENST00000378809 KIF21AQ7Z4S6 1674 aa22.89■■□□□ 1.26
RAB3IP-203ENST00000378809 ABCA10Q8WWZ4 1543 aa22.89■■□□□ 1.26
RAB3IP-203ENST00000378809 CARMIL1Q5VZK9 1371 aa22.89■■□□□ 1.25
RAB3IP-203ENST00000378809 VPS8Q8N3P4 1428 aa22.87■■□□□ 1.25
RAB3IP-203ENST00000378809 APLP2Q06481 763 aa22.8■■□□□ 1.24
RAB3IP-203ENST00000378809 ARAP1Q96P48 1450 aa22.75■■□□□ 1.23
RAB3IP-203ENST00000378809 TDRD9Q8NDG6 1382 aaKnown RBP22.74■■□□□ 1.23
RAB3IP-203ENST00000378809 WDR97A6NE52 1622 aa22.72■■□□□ 1.23
RAB3IP-203ENST00000378809 MRC2Q9UBG0 1479 aa22.71■■□□□ 1.23
RAB3IP-203ENST00000378809 ARHGAP35Q9NRY4 1499 aa22.68■■□□□ 1.22
RAB3IP-203ENST00000378809 CUL7Q14999 1698 aa22.67■■□□□ 1.22
RAB3IP-203ENST00000378809 GAPVD1Q14C86 1478 aa22.67■■□□□ 1.22
RAB3IP-203ENST00000378809 ABCA5Q8WWZ7 1642 aa22.65■■□□□ 1.22
RAB3IP-203ENST00000378809 TARBP1Q13395 1621 aaKnown RBP22.62■■□□□ 1.21
RAB3IP-203ENST00000378809 ERCC6Q03468 1493 aa22.6■■□□□ 1.21
RAB3IP-203ENST00000378809 ZEB1P37275 1124 aaPredicted RBP22.55■■□□□ 1.2
RAB3IP-203ENST00000378809 WDR62O43379 1518 aa22.54■■□□□ 1.2
RAB3IP-203ENST00000378809 P3H3Q8IVL6 736 aa22.52■■□□□ 1.2
RAB3IP-203ENST00000378809 AQRO60306 1485 aaKnown RBP eCLIP22.52■■□□□ 1.19
RAB3IP-203ENST00000378809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.49■■□□□ 1.19
RAB3IP-203ENST00000378809 IFT140Q96RY7 1462 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms