RNA–Protein interactions for RNA: ENST00000378203.5

RPP38-204, Transcript of ribonuclease P/MRP subunit p38, humanhuman

APPRIS P1 TSL 2

Gene RPP38, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38-204ENST00000378203 NISCHQ9Y2I1 1504 aa49.66■■■■■ 5.54
RPP38-204ENST00000378203 CCDC180Q9P1Z9 1646 aa44.11■■■■■ 4.65
RPP38-204ENST00000378203 ABCC9O60706 1549 aa42.66■■■■■ 4.42
RPP38-204ENST00000378203 ZCCHC6Q5VYS8 1495 aaKnown RBP41.47■■■■■ 4.23
RPP38-204ENST00000378203 NACADO15069 1562 aa41.31■■■■■ 4.2
RPP38-204ENST00000378203 DCAF8L2P0C7V8 631 aa41.3■■■■■ 4.2
RPP38-204ENST00000378203 RB1CC1Q8TDY2 1594 aa41.29■■■■■ 4.2
RPP38-204ENST00000378203 MYO15BQ96JP2 1530 aa41.16■■■■■ 4.18
RPP38-204ENST00000378203 DCAF1Q9Y4B6 1507 aa41.13■■■■■ 4.17
RPP38-204ENST00000378203 UNC13AQ9UPW8 1703 aa40.45■■■■■ 4.07
RPP38-204ENST00000378203 SCRIBQ14160 1630 aa40.23■■■■■ 4.03
RPP38-204ENST00000378203 BICRAQ9NZM4 1560 aa39.96■■■■□ 3.99
RPP38-204ENST00000378203 PABPN1Q86U42 306 aaKnown RBP eCLIP39.87■■■■□ 3.97
RPP38-204ENST00000378203 SHROOM4Q9ULL8 1493 aa39.62■■■■□ 3.93
RPP38-204ENST00000378203 EIF4G1Q04637 1599 aaKnown RBP38.91■■■■□ 3.82
RPP38-204ENST00000378203 DNAJC5BQ9UF47 199 aa38.68■■■■□ 3.78
RPP38-204ENST00000378203 CC2D2AQ9P2K1 1620 aa38.67■■■■□ 3.78
RPP38-204ENST00000378203 CECR2Q9BXF3 1484 aa38.6■■■■□ 3.77
RPP38-204ENST00000378203 BAZ1AQ9NRL2 1556 aaPredicted RBP38.52■■■■□ 3.76
RPP38-204ENST00000378203 SMARCA4P51532 1647 aa38.52■■■■□ 3.76
RPP38-204ENST00000378203 MROH2BQ7Z745 1585 aa38.27■■■■□ 3.72
RPP38-204ENST00000378203 SMARCA2P51531 1590 aa38.18■■■■□ 3.7
RPP38-204ENST00000378203 ATAD2BQ9ULI0 1458 aa38.13■■■■□ 3.69
RPP38-204ENST00000378203 PEG3Q9GZU2 1588 aa38.1■■■■□ 3.69
RPP38-204ENST00000378203 NCAPD3P42695 1498 aa38.04■■■■□ 3.68
RPP38-204ENST00000378203 HMGXB3Q12766 1538 aa37.97■■■■□ 3.67
RPP38-204ENST00000378203 RSF1Q96T23 1441 aaPredicted RBP37.95■■■■□ 3.67
RPP38-204ENST00000378203 WIZO95785 1651 aa37.95■■■■□ 3.66
RPP38-204ENST00000378203 BAZ1BQ9UIG0 1483 aaKnown RBP37.89■■■■□ 3.66
RPP38-204ENST00000378203 TOP2AP11388 1531 aaKnown RBP37.56■■■■□ 3.6
RPP38-204ENST00000378203 SUPT5HO00267 1087 aaKnown RBP37.28■■■■□ 3.56
RPP38-204ENST00000378203 LAMC3Q9Y6N6 1575 aa37.07■■■■□ 3.52
RPP38-204ENST00000378203 CCDC88BA6NC98 1476 aa37.05■■■■□ 3.52
RPP38-204ENST00000378203 NESP48681 1621 aa37.02■■■■□ 3.52
RPP38-204ENST00000378203 CADPSQ9ULU8 1353 aa36.94■■■■□ 3.5
RPP38-204ENST00000378203 CFTRP13569 1480 aa36.82■■■■□ 3.49
RPP38-204ENST00000378203 PRDM2Q13029 1718 aa36.8■■■■□ 3.48
RPP38-204ENST00000378203 ERCC6Q03468 1493 aa36.8■■■■□ 3.48
RPP38-204ENST00000378203 PDS5BQ9NTI5 1447 aa36.76■■■■□ 3.47
RPP38-204ENST00000378203 KIF21AQ7Z4S6 1674 aa36.72■■■■□ 3.47
RPP38-204ENST00000378203 FANCD2Q9BXW9 1451 aa36.56■■■■□ 3.44
RPP38-204ENST00000378203 CEP164Q9UPV0 1460 aa36.52■■■■□ 3.44
RPP38-204ENST00000378203 THOC2Q8NI27 1593 aaKnown RBP36.45■■■■□ 3.43
RPP38-204ENST00000378203 MRC2Q9UBG0 1479 aa36.37■■■■□ 3.41
RPP38-204ENST00000378203 CUX2O14529 1486 aa36.24■■■■□ 3.39
RPP38-204ENST00000378203 WDR62O43379 1518 aa36.24■■■■□ 3.39
RPP38-204ENST00000378203 URB2Q14146 1524 aaKnown RBP36.16■■■■□ 3.38
RPP38-204ENST00000378203 ABCC8Q09428 1581 aa36.08■■■■□ 3.37
RPP38-204ENST00000378203 DNMBPQ6XZF7 1577 aa36.06■■■■□ 3.36
RPP38-204ENST00000378203 TOPBP1Q92547 1522 aa36.03■■■■□ 3.36
RPP38-204ENST00000378203 CUX1P39880 1505 aa35.9■■■■□ 3.34
RPP38-204ENST00000378203 WRNQ14191 1432 aaPredicted RBP eCLIP35.81■■■■□ 3.32
RPP38-204ENST00000378203 BIVM-ERCC5R4GMW8 1640 aa35.76■■■■□ 3.32
RPP38-204ENST00000378203 POLA1P09884 1462 aaPredicted RBP35.74■■■■□ 3.31
RPP38-204ENST00000378203 TOP2BQ02880 1626 aa35.74■■■■□ 3.31
RPP38-204ENST00000378203 SYNJ1O43426 1573 aa35.73■■■■□ 3.31
RPP38-204ENST00000378203 FGD5Q6ZNL6 1462 aa35.73■■■■□ 3.31
RPP38-204ENST00000378203 IFT140Q96RY7 1462 aa35.71■■■■□ 3.31
RPP38-204ENST00000378203 TARBP1Q13395 1621 aaKnown RBP35.63■■■■□ 3.29
RPP38-204ENST00000378203 SOGA1O94964 1423 aa35.58■■■■□ 3.29
RPP38-204ENST00000378203 RAD54L2Q9Y4B4 1467 aa35.55■■■■□ 3.28
RPP38-204ENST00000378203 WDR97A6NE52 1622 aa35.5■■■■□ 3.27
RPP38-204ENST00000378203 ZNF608Q9ULD9 1512 aaPredicted RBP35.47■■■■□ 3.27
RPP38-204ENST00000378203 EIF4G3O43432 1585 aaKnown RBP35.46■■■■□ 3.27
RPP38-204ENST00000378203 ABCA10Q8WWZ4 1543 aa35.39■■■■□ 3.26
RPP38-204ENST00000378203 AQRO60306 1485 aaKnown RBP eCLIP35.32■■■■□ 3.24
RPP38-204ENST00000378203 TDRD9Q8NDG6 1382 aaKnown RBP35.31■■■■□ 3.24
RPP38-204ENST00000378203 ABCA5Q8WWZ7 1642 aa35.27■■■■□ 3.24
RPP38-204ENST00000378203 PBRM1Q86U86 1689 aa35.24■■■■□ 3.23
RPP38-204ENST00000378203 TRIM41Q8WV44 630 aa35.21■■■■□ 3.23
RPP38-204ENST00000378203 GAPVD1Q14C86 1478 aa35.21■■■■□ 3.23
RPP38-204ENST00000378203 GRIN2BQ13224 1484 aa35.15■■■■□ 3.22
RPP38-204ENST00000378203 SNAPC4Q5SXM2 1469 aa35.05■■■■□ 3.2
RPP38-204ENST00000378203 KIF27Q86VH2 1401 aa35.05■■■■□ 3.2
RPP38-204ENST00000378203 MAGI1Q96QZ7 1491 aaPredicted RBP35.04■■■■□ 3.2
RPP38-204ENST00000378203 ERICH3Q5RHP9 1530 aa35.01■■■■□ 3.19
RPP38-204ENST00000378203 CHD1O14646 1710 aa34.99■■■■□ 3.19
RPP38-204ENST00000378203 CHIC1Q5VXU3 224 aa34.98■■■■□ 3.19
RPP38-204ENST00000378203 ADAMTS12P58397 1594 aa34.91■■■■□ 3.18
RPP38-204ENST00000378203 SYNJ2O15056 1496 aa34.88■■■■□ 3.17
RPP38-204ENST00000378203 FBLN2P98095 1184 aa34.84■■■■□ 3.17
RPP38-204ENST00000378203 CUL7Q14999 1698 aa34.83■■■■□ 3.17
RPP38-204ENST00000378203 CHMP7Q8WUX9 453 aaPredicted RBP34.81■■■■□ 3.16
RPP38-204ENST00000378203 FHAD1B1AJZ9 1412 aa34.81■■■■□ 3.16
RPP38-204ENST00000378203 RUSC2Q8N2Y8 1516 aa34.79■■■■□ 3.16
RPP38-204ENST00000378203 IGF1RP08069 1367 aa34.77■■■■□ 3.16
RPP38-204ENST00000378203 OSCARQ8IYS5 282 aa34.76■■■■□ 3.16
RPP38-204ENST00000378203 GRIN2AQ12879 1464 aa34.71■■■■□ 3.15
RPP38-204ENST00000378203 EEA1Q15075 1411 aa34.64■■■■□ 3.14
RPP38-204ENST00000378203 CARMIL1Q5VZK9 1371 aa34.62■■■■□ 3.13
RPP38-204ENST00000378203 DNAJC5Q9H3Z4 198 aa34.58■■■■□ 3.13
RPP38-204ENST00000378203 CEP170Q5SW79 1584 aa34.53■■■■□ 3.12
RPP38-204ENST00000378203 CLASP1Q7Z460 1538 aa34.51■■■■□ 3.12
RPP38-204ENST00000378203 NUP160Q12769 1436 aa34.51■■■■□ 3.12
RPP38-204ENST00000378203 RAPGEF2Q9Y4G8 1499 aa34.49■■■■□ 3.11
RPP38-204ENST00000378203 CSRNP3Q8WYN3 585 aa34.47■■■■□ 3.11
RPP38-204ENST00000378203 FAM9AQ8IZU1 332 aaPredicted RBP34.45■■■■□ 3.11
RPP38-204ENST00000378203 PRXQ9BXM0 1461 aa34.43■■■■□ 3.1
RPP38-204ENST00000378203 KIF21BO75037 1637 aa34.3■■■■□ 3.08
RPP38-204ENST00000378203 CTTNBP2Q8WZ74 1663 aa34.29■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms