RNA–Protein interactions for RNA: ENST00000378054.6

GMNN-203, Transcript of geminin, DNA replication inhibitor, humanhuman

TSL 3

Gene GMNN, Length 653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMNN-203ENST00000378054 NISCHQ9Y2I1 1504 aa42.12■■■■■ 4.33
GMNN-203ENST00000378054 CCDC180Q9P1Z9 1646 aa37.4■■■■□ 3.58
GMNN-203ENST00000378054 ABCC9O60706 1549 aa36.39■■■■□ 3.42
GMNN-203ENST00000378054 DCAF8L2P0C7V8 631 aa35.2■■■■□ 3.23
GMNN-203ENST00000378054 ZCCHC6Q5VYS8 1495 aaKnown RBP35.16■■■■□ 3.22
GMNN-203ENST00000378054 RB1CC1Q8TDY2 1594 aa35.12■■■■□ 3.21
GMNN-203ENST00000378054 NACADO15069 1562 aa35.09■■■■□ 3.21
GMNN-203ENST00000378054 MYO15BQ96JP2 1530 aa34.9■■■■□ 3.18
GMNN-203ENST00000378054 DCAF1Q9Y4B6 1507 aa34.85■■■■□ 3.17
GMNN-203ENST00000378054 UNC13AQ9UPW8 1703 aa34.26■■■■□ 3.07
GMNN-203ENST00000378054 SCRIBQ14160 1630 aa34.19■■■■□ 3.06
GMNN-203ENST00000378054 PABPN1Q86U42 306 aaKnown RBP eCLIP34.01■■■■□ 3.03
GMNN-203ENST00000378054 BICRAQ9NZM4 1560 aa33.94■■■■□ 3.02
GMNN-203ENST00000378054 SHROOM4Q9ULL8 1493 aa33.68■■■□□ 2.98
GMNN-203ENST00000378054 EIF4G1Q04637 1599 aaKnown RBP33.09■■■□□ 2.89
GMNN-203ENST00000378054 DNAJC5BQ9UF47 199 aa33.03■■■□□ 2.88
GMNN-203ENST00000378054 CC2D2AQ9P2K1 1620 aa32.9■■■□□ 2.86
GMNN-203ENST00000378054 CECR2Q9BXF3 1484 aa32.76■■■□□ 2.84
GMNN-203ENST00000378054 BAZ1AQ9NRL2 1556 aaPredicted RBP32.68■■■□□ 2.82
GMNN-203ENST00000378054 SMARCA4P51532 1647 aa32.67■■■□□ 2.82
GMNN-203ENST00000378054 MROH2BQ7Z745 1585 aa32.46■■■□□ 2.79
GMNN-203ENST00000378054 SMARCA2P51531 1590 aa32.44■■■□□ 2.78
GMNN-203ENST00000378054 ATAD2BQ9ULI0 1458 aa32.4■■■□□ 2.78
GMNN-203ENST00000378054 NCAPD3P42695 1498 aa32.32■■■□□ 2.76
GMNN-203ENST00000378054 PEG3Q9GZU2 1588 aa32.3■■■□□ 2.76
GMNN-203ENST00000378054 HMGXB3Q12766 1538 aa32.25■■■□□ 2.75
GMNN-203ENST00000378054 BAZ1BQ9UIG0 1483 aaKnown RBP32.23■■■□□ 2.75
GMNN-203ENST00000378054 RSF1Q96T23 1441 aaPredicted RBP32.16■■■□□ 2.74
GMNN-203ENST00000378054 WIZO95785 1651 aa32.15■■■□□ 2.74
GMNN-203ENST00000378054 TOP2AP11388 1531 aaKnown RBP31.85■■■□□ 2.69
GMNN-203ENST00000378054 SUPT5HO00267 1087 aaKnown RBP31.61■■■□□ 2.65
GMNN-203ENST00000378054 NESP48681 1621 aa31.52■■■□□ 2.64
GMNN-203ENST00000378054 LAMC3Q9Y6N6 1575 aa31.51■■■□□ 2.63
GMNN-203ENST00000378054 CCDC88BA6NC98 1476 aa31.42■■■□□ 2.62
GMNN-203ENST00000378054 ERCC6Q03468 1493 aa31.42■■■□□ 2.62
GMNN-203ENST00000378054 CADPSQ9ULU8 1353 aa31.42■■■□□ 2.62
GMNN-203ENST00000378054 PDS5BQ9NTI5 1447 aa31.3■■■□□ 2.6
GMNN-203ENST00000378054 CFTRP13569 1480 aa31.27■■■□□ 2.6
GMNN-203ENST00000378054 KIF21AQ7Z4S6 1674 aa31.19■■■□□ 2.58
GMNN-203ENST00000378054 PRDM2Q13029 1718 aa31.13■■■□□ 2.57
GMNN-203ENST00000378054 FANCD2Q9BXW9 1451 aa31.1■■■□□ 2.57
GMNN-203ENST00000378054 CEP164Q9UPV0 1460 aa31.08■■■□□ 2.57
GMNN-203ENST00000378054 THOC2Q8NI27 1593 aaKnown RBP31■■■□□ 2.55
GMNN-203ENST00000378054 MRC2Q9UBG0 1479 aa30.96■■■□□ 2.55
GMNN-203ENST00000378054 CUX2O14529 1486 aa30.94■■■□□ 2.54
GMNN-203ENST00000378054 WDR62O43379 1518 aa30.83■■■□□ 2.53
GMNN-203ENST00000378054 URB2Q14146 1524 aaKnown RBP30.74■■■□□ 2.51
GMNN-203ENST00000378054 ABCC8Q09428 1581 aa30.64■■■□□ 2.5
GMNN-203ENST00000378054 DNMBPQ6XZF7 1577 aa30.62■■■□□ 2.49
GMNN-203ENST00000378054 TOPBP1Q92547 1522 aa30.62■■■□□ 2.49
GMNN-203ENST00000378054 CUX1P39880 1505 aa30.45■■■□□ 2.47
GMNN-203ENST00000378054 IFT140Q96RY7 1462 aa30.39■■■□□ 2.46
GMNN-203ENST00000378054 WRNQ14191 1432 aaPredicted RBP eCLIP30.39■■■□□ 2.45
GMNN-203ENST00000378054 POLA1P09884 1462 aaPredicted RBP30.38■■■□□ 2.45
GMNN-203ENST00000378054 FGD5Q6ZNL6 1462 aa30.35■■■□□ 2.45
GMNN-203ENST00000378054 TOP2BQ02880 1626 aa30.28■■■□□ 2.44
GMNN-203ENST00000378054 BIVM-ERCC5R4GMW8 1640 aa30.28■■■□□ 2.44
GMNN-203ENST00000378054 SYNJ1O43426 1573 aa30.28■■■□□ 2.44
GMNN-203ENST00000378054 SOGA1O94964 1423 aa30.25■■■□□ 2.43
GMNN-203ENST00000378054 TARBP1Q13395 1621 aaKnown RBP30.24■■■□□ 2.43
GMNN-203ENST00000378054 RAD54L2Q9Y4B4 1467 aa30.23■■■□□ 2.43
GMNN-203ENST00000378054 ZNF608Q9ULD9 1512 aaPredicted RBP30.19■■■□□ 2.42
GMNN-203ENST00000378054 EIF4G3O43432 1585 aaKnown RBP30.15■■■□□ 2.42
GMNN-203ENST00000378054 WDR97A6NE52 1622 aa30.07■■■□□ 2.4
GMNN-203ENST00000378054 AQRO60306 1485 aaKnown RBP eCLIP30.06■■■□□ 2.43e-8■□□□□ 11.2
GMNN-203ENST00000378054 TDRD9Q8NDG6 1382 aaKnown RBP30.04■■■□□ 2.4
GMNN-203ENST00000378054 ABCA10Q8WWZ4 1543 aa30.04■■■□□ 2.4
GMNN-203ENST00000378054 GAPVD1Q14C86 1478 aa29.93■■■□□ 2.38
GMNN-203ENST00000378054 ABCA5Q8WWZ7 1642 aa29.92■■■□□ 2.38
GMNN-203ENST00000378054 GRIN2BQ13224 1484 aa29.9■■■□□ 2.38
GMNN-203ENST00000378054 PBRM1Q86U86 1689 aa29.88■■■□□ 2.37
GMNN-203ENST00000378054 TRIM41Q8WV44 630 aa29.84■■■□□ 2.37
GMNN-203ENST00000378054 SNAPC4Q5SXM2 1469 aa29.84■■■□□ 2.37
GMNN-203ENST00000378054 MAGI1Q96QZ7 1491 aaPredicted RBP29.8■■■□□ 2.36
GMNN-203ENST00000378054 KIF27Q86VH2 1401 aa29.74■■■□□ 2.35
GMNN-203ENST00000378054 FBLN2P98095 1184 aa29.74■■■□□ 2.35
GMNN-203ENST00000378054 CHD1O14646 1710 aa29.72■■■□□ 2.35
GMNN-203ENST00000378054 ERICH3Q5RHP9 1530 aa29.71■■■□□ 2.35
GMNN-203ENST00000378054 SYNJ2O15056 1496 aa29.68■■■□□ 2.34
GMNN-203ENST00000378054 OSCARQ8IYS5 282 aa29.67■■■□□ 2.34
GMNN-203ENST00000378054 CHMP7Q8WUX9 453 aaPredicted RBP29.66■■■□□ 2.34
GMNN-203ENST00000378054 ADAMTS12P58397 1594 aa29.64■■■□□ 2.33
GMNN-203ENST00000378054 DNAJC5Q9H3Z4 198 aa29.63■■■□□ 2.33
GMNN-203ENST00000378054 FHAD1B1AJZ9 1412 aa29.59■■■□□ 2.33
GMNN-203ENST00000378054 CHIC1Q5VXU3 224 aa29.54■■■□□ 2.32
GMNN-203ENST00000378054 CUL7Q14999 1698 aa29.53■■■□□ 2.32
GMNN-203ENST00000378054 GRIN2AQ12879 1464 aa29.5■■■□□ 2.31
GMNN-203ENST00000378054 IGF1RP08069 1367 aa29.5■■■□□ 2.31
GMNN-203ENST00000378054 RUSC2Q8N2Y8 1516 aa29.45■■■□□ 2.31
GMNN-203ENST00000378054 CARMIL1Q5VZK9 1371 aa29.39■■■□□ 2.3
GMNN-203ENST00000378054 CLASP1Q7Z460 1538 aa29.35■■■□□ 2.29
GMNN-203ENST00000378054 CEP170Q5SW79 1584 aa29.34■■■□□ 2.29
GMNN-203ENST00000378054 EEA1Q15075 1411 aa29.33■■■□□ 2.29
GMNN-203ENST00000378054 NUP160Q12769 1436 aa29.32■■■□□ 2.28
GMNN-203ENST00000378054 RAPGEF2Q9Y4G8 1499 aa29.26■■■□□ 2.27
GMNN-203ENST00000378054 FAM9AQ8IZU1 332 aaPredicted RBP29.23■■■□□ 2.27
GMNN-203ENST00000378054 CSRNP3Q8WYN3 585 aa29.21■■■□□ 2.27
GMNN-203ENST00000378054 ARHGEF11O15085 1522 aa29.2■■■□□ 2.27
GMNN-203ENST00000378054 RIMBP3CA6NJZ7 1639 aa29.19■■■□□ 2.26
GMNN-203ENST00000378054 RIMBP3BA6NNM3 1639 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms