RNA–Protein interactions for RNA: ENST00000374762.3

NIPSNAP3B-201, Transcript of nipsnap homolog 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP3B, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3B-201ENST00000374762 NISCHQ9Y2I1 1504 aa23.07■■□□□ 1.28
NIPSNAP3B-201ENST00000374762 AEBP2Q6ZN18 517 aaPredicted RBP21.23■□□□□ 0.99
NIPSNAP3B-201ENST00000374762 CCDC180Q9P1Z9 1646 aa20.3■□□□□ 0.84
NIPSNAP3B-201ENST00000374762 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
NIPSNAP3B-201ENST00000374762 ABCC9O60706 1549 aa19.56■□□□□ 0.72
NIPSNAP3B-201ENST00000374762 ZCCHC6Q5VYS8 1495 aaKnown RBP19.3■□□□□ 0.68
NIPSNAP3B-201ENST00000374762 DCAF8L2P0C7V8 631 aa19.22■□□□□ 0.67
NIPSNAP3B-201ENST00000374762 DCAF1Q9Y4B6 1507 aa19.06■□□□□ 0.64
NIPSNAP3B-201ENST00000374762 NACADO15069 1562 aa19■□□□□ 0.63
NIPSNAP3B-201ENST00000374762 MYO15BQ96JP2 1530 aa18.99■□□□□ 0.63
NIPSNAP3B-201ENST00000374762 RB1CC1Q8TDY2 1594 aa18.94■□□□□ 0.62
NIPSNAP3B-201ENST00000374762 SCRIBQ14160 1630 aa18.62■□□□□ 0.57
NIPSNAP3B-201ENST00000374762 SHROOM4Q9ULL8 1493 aa18.56■□□□□ 0.56
NIPSNAP3B-201ENST00000374762 UNC13AQ9UPW8 1703 aa18.51■□□□□ 0.55
NIPSNAP3B-201ENST00000374762 PABPN1Q86U42 306 aaKnown RBP eCLIP18.37■□□□□ 0.53
NIPSNAP3B-201ENST00000374762 BICRAQ9NZM4 1560 aa18.35■□□□□ 0.53
NIPSNAP3B-201ENST00000374762 SENP3Q9H4L4 574 aaPredicted RBP18.12■□□□□ 0.49
NIPSNAP3B-201ENST00000374762 CECR2Q9BXF3 1484 aa17.96■□□□□ 0.47
NIPSNAP3B-201ENST00000374762 PHF23Q9BUL5 403 aaPredicted RBP17.89■□□□□ 0.45
NIPSNAP3B-201ENST00000374762 BAZ1AQ9NRL2 1556 aaPredicted RBP17.85■□□□□ 0.45
NIPSNAP3B-201ENST00000374762 EIF4G1Q04637 1599 aaKnown RBP17.85■□□□□ 0.45
NIPSNAP3B-201ENST00000374762 SMARCA4P51532 1647 aa17.82■□□□□ 0.44
NIPSNAP3B-201ENST00000374762 MROH2BQ7Z745 1585 aa17.81■□□□□ 0.44
NIPSNAP3B-201ENST00000374762 RSF1Q96T23 1441 aaPredicted RBP17.74■□□□□ 0.43
NIPSNAP3B-201ENST00000374762 CC2D2AQ9P2K1 1620 aa17.68■□□□□ 0.42
NIPSNAP3B-201ENST00000374762 SUPT5HO00267 1087 aaKnown RBP17.67■□□□□ 0.42
NIPSNAP3B-201ENST00000374762 WIZO95785 1651 aa17.64■□□□□ 0.41
NIPSNAP3B-201ENST00000374762 ATAD2BQ9ULI0 1458 aa17.62■□□□□ 0.41
NIPSNAP3B-201ENST00000374762 SMARCA2P51531 1590 aa17.61■□□□□ 0.41
NIPSNAP3B-201ENST00000374762 PEG3Q9GZU2 1588 aa17.61■□□□□ 0.41
NIPSNAP3B-201ENST00000374762 DNAJC5BQ9UF47 199 aa17.59■□□□□ 0.41
NIPSNAP3B-201ENST00000374762 NCAPD3P42695 1498 aa17.53■□□□□ 0.4
NIPSNAP3B-201ENST00000374762 BAZ1BQ9UIG0 1483 aaKnown RBP17.52■□□□□ 0.39
NIPSNAP3B-201ENST00000374762 HMGXB3Q12766 1538 aa17.48■□□□□ 0.39
NIPSNAP3B-201ENST00000374762 TOP2AP11388 1531 aaKnown RBP17.45■□□□□ 0.38
NIPSNAP3B-201ENST00000374762 CCDC88BA6NC98 1476 aa17.27■□□□□ 0.35
NIPSNAP3B-201ENST00000374762 CADPSQ9ULU8 1353 aa17.06■□□□□ 0.32
NIPSNAP3B-201ENST00000374762 CFTRP13569 1480 aa17.04■□□□□ 0.32
NIPSNAP3B-201ENST00000374762 NESP48681 1621 aa17.04■□□□□ 0.32
NIPSNAP3B-201ENST00000374762 LAMC3Q9Y6N6 1575 aa17.01■□□□□ 0.31
NIPSNAP3B-201ENST00000374762 FOXD1Q16676 465 aa16.96■□□□□ 0.31
NIPSNAP3B-201ENST00000374762 PRDM2Q13029 1718 aa16.91■□□□□ 0.3
NIPSNAP3B-201ENST00000374762 PDS5BQ9NTI5 1447 aa16.9■□□□□ 0.3
NIPSNAP3B-201ENST00000374762 FANCD2Q9BXW9 1451 aa16.88■□□□□ 0.29
NIPSNAP3B-201ENST00000374762 KIF21AQ7Z4S6 1674 aa16.83■□□□□ 0.28
NIPSNAP3B-201ENST00000374762 ERCC6Q03468 1493 aa16.82■□□□□ 0.28
NIPSNAP3B-201ENST00000374762 CEP164Q9UPV0 1460 aa16.82■□□□□ 0.28
NIPSNAP3B-201ENST00000374762 ABCC8Q09428 1581 aa16.78■□□□□ 0.28
NIPSNAP3B-201ENST00000374762 WRNQ14191 1432 aaPredicted RBP eCLIP16.72■□□□□ 0.27
NIPSNAP3B-201ENST00000374762 MRC2Q9UBG0 1479 aa16.7■□□□□ 0.26
NIPSNAP3B-201ENST00000374762 URB2Q14146 1524 aaKnown RBP16.68■□□□□ 0.26
NIPSNAP3B-201ENST00000374762 CUX1P39880 1505 aa16.67■□□□□ 0.26
NIPSNAP3B-201ENST00000374762 SYNJ1O43426 1573 aa16.66■□□□□ 0.26
NIPSNAP3B-201ENST00000374762 THOC2Q8NI27 1593 aaKnown RBP16.65■□□□□ 0.26
NIPSNAP3B-201ENST00000374762 DNMBPQ6XZF7 1577 aa16.65■□□□□ 0.26
NIPSNAP3B-201ENST00000374762 TOPBP1Q92547 1522 aa16.65■□□□□ 0.26
NIPSNAP3B-201ENST00000374762 TRIM41Q8WV44 630 aa16.64■□□□□ 0.25
NIPSNAP3B-201ENST00000374762 TOP2BQ02880 1626 aa16.63■□□□□ 0.25
NIPSNAP3B-201ENST00000374762 WDR62O43379 1518 aa16.62■□□□□ 0.25
NIPSNAP3B-201ENST00000374762 BIVM-ERCC5R4GMW8 1640 aa16.61■□□□□ 0.25
NIPSNAP3B-201ENST00000374762 FGD5Q6ZNL6 1462 aa16.56■□□□□ 0.24
NIPSNAP3B-201ENST00000374762 POLA1P09884 1462 aaPredicted RBP16.54■□□□□ 0.24
NIPSNAP3B-201ENST00000374762 SOGA1O94964 1423 aa16.49■□□□□ 0.23
NIPSNAP3B-201ENST00000374762 CUX2O14529 1486 aa16.48■□□□□ 0.23
NIPSNAP3B-201ENST00000374762 RAD54L2Q9Y4B4 1467 aa16.48■□□□□ 0.23
NIPSNAP3B-201ENST00000374762 IFT140Q96RY7 1462 aa16.43■□□□□ 0.22
NIPSNAP3B-201ENST00000374762 TARBP1Q13395 1621 aaKnown RBP16.43■□□□□ 0.22
NIPSNAP3B-201ENST00000374762 ABCA10Q8WWZ4 1543 aa16.4■□□□□ 0.22
NIPSNAP3B-201ENST00000374762 WDR97A6NE52 1622 aa16.37■□□□□ 0.21
NIPSNAP3B-201ENST00000374762 TDRD9Q8NDG6 1382 aaKnown RBP16.37■□□□□ 0.21
NIPSNAP3B-201ENST00000374762 ZNF608Q9ULD9 1512 aaPredicted RBP16.35■□□□□ 0.21
NIPSNAP3B-201ENST00000374762 RUSC2Q8N2Y8 1516 aa16.34■□□□□ 0.21
NIPSNAP3B-201ENST00000374762 KIF27Q86VH2 1401 aa16.34■□□□□ 0.21
NIPSNAP3B-201ENST00000374762 FAM9AQ8IZU1 332 aaPredicted RBP16.33■□□□□ 0.2
NIPSNAP3B-201ENST00000374762 AQRO60306 1485 aaKnown RBP eCLIP16.32■□□□□ 0.2
NIPSNAP3B-201ENST00000374762 GAPVD1Q14C86 1478 aa16.3■□□□□ 0.2
NIPSNAP3B-201ENST00000374762 ABCA5Q8WWZ7 1642 aa16.29■□□□□ 0.2
NIPSNAP3B-201ENST00000374762 EIF4G3O43432 1585 aaKnown RBP16.29■□□□□ 0.2
NIPSNAP3B-201ENST00000374762 EEA1Q15075 1411 aa16.27■□□□□ 0.19
NIPSNAP3B-201ENST00000374762 CSRNP3Q8WYN3 585 aa16.23■□□□□ 0.19
NIPSNAP3B-201ENST00000374762 GRIN2BQ13224 1484 aa16.23■□□□□ 0.19
NIPSNAP3B-201ENST00000374762 IGF1RP08069 1367 aa16.23■□□□□ 0.19
NIPSNAP3B-201ENST00000374762 PBRM1Q86U86 1689 aa16.22■□□□□ 0.19
NIPSNAP3B-201ENST00000374762 ERICH3Q5RHP9 1530 aa16.21■□□□□ 0.19
NIPSNAP3B-201ENST00000374762 SNAPC4Q5SXM2 1469 aa16.16■□□□□ 0.18
NIPSNAP3B-201ENST00000374762 CARMIL1Q5VZK9 1371 aa16.15■□□□□ 0.18
NIPSNAP3B-201ENST00000374762 CUL7Q14999 1698 aa16.14■□□□□ 0.17
NIPSNAP3B-201ENST00000374762 MAGI1Q96QZ7 1491 aaPredicted RBP16.13■□□□□ 0.17
NIPSNAP3B-201ENST00000374762 EHMT2Q96KQ7 1210 aa16.13■□□□□ 0.17
NIPSNAP3B-201ENST00000374762 POTEDQ86YR6 584 aa16.12■□□□□ 0.17
NIPSNAP3B-201ENST00000374762 ADAMTS12P58397 1594 aa16.11■□□□□ 0.17
NIPSNAP3B-201ENST00000374762 PRXQ9BXM0 1461 aa16.11■□□□□ 0.17
NIPSNAP3B-201ENST00000374762 FHAD1B1AJZ9 1412 aa16.11■□□□□ 0.17
NIPSNAP3B-201ENST00000374762 FBLN2P98095 1184 aa16.09■□□□□ 0.17
NIPSNAP3B-201ENST00000374762 RAPGEF2Q9Y4G8 1499 aa16.08■□□□□ 0.16
NIPSNAP3B-201ENST00000374762 CHMP7Q8WUX9 453 aaPredicted RBP16.08■□□□□ 0.16
NIPSNAP3B-201ENST00000374762 SYNJ2O15056 1496 aa16.08■□□□□ 0.16
NIPSNAP3B-201ENST00000374762 KIF21BO75037 1637 aa16.07■□□□□ 0.16
NIPSNAP3B-201ENST00000374762 LOC105371045A0A1W2PR82 267 aa16.04■□□□□ 0.16
NIPSNAP3B-201ENST00000374762 GOLGA3Q08378 1498 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms